BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0192.0079.p (185 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll5007 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptid... 286 2e-77 BMEI2047 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), pepti... 279 3e-75 SMc02575 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), pepti... 276 1e-74 AGc70 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidas... 273 1e-73 CC3727 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptida... 250 1e-66 >mll5007 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Mlo Mesorhizobium loti Length = 177 Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 140/173 (80%), Positives = 154/173 (89%), Gaps = 1/173 (0%) Query: 12 HGTTICTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRRIGKG-DVIGGFAGATADAFTLF 70 H TTI TVRKG KVVI GDGQVS+GQT++K NA+KVRRIGKG +VI GFAGATADAFTL Sbjct: 2 HATTIVTVRKGNKVVIAGDGQVSLGQTIMKGNARKVRRIGKGGNVIAGFAGATADAFTLL 61 Query: 71 ERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPDS 130 ERLE+KLEQYP QLTRA VELAKDWRTDRYLRRLEAMM+VADK VSL LTGTGDVLEP+ Sbjct: 62 ERLEAKLEQYPDQLTRACVELAKDWRTDRYLRRLEAMMLVADKSVSLALTGTGDVLEPEH 121 Query: 131 GVMAIGSGGNYALAAARALVDTDKDAETIVRRALDIAADICVYTNRNVTIETI 183 GVMAIGSGGNYALAAARAL+DTDKDAE I R+A+ IA+DICVYTN N +ET+ Sbjct: 122 GVMAIGSGGNYALAAARALMDTDKDAEEIARKAMQIASDICVYTNNNFVVETL 174 >BMEI2047 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Bme Brucella melitensis Length = 184 Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 132/172 (76%), Positives = 153/172 (88%) Query: 12 HGTTICTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRRIGKGDVIGGFAGATADAFTLFE 71 +GTTI TVRK GKVVI GDGQVS+G TV+K NA+KVRRIGKG+VI GFAGATADAFTL E Sbjct: 10 YGTTIVTVRKDGKVVIAGDGQVSLGNTVMKGNARKVRRIGKGNVIAGFAGATADAFTLLE 69 Query: 72 RLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPDSG 131 RLE+KLEQYP QL RA+VEL KDWRTDRYLR+LEAMM+VAD V+L LTGTGDVLEP+ G Sbjct: 70 RLEAKLEQYPDQLMRASVELTKDWRTDRYLRKLEAMMLVADSKVTLALTGTGDVLEPEQG 129 Query: 132 VMAIGSGGNYALAAARALVDTDKDAETIVRRALDIAADICVYTNRNVTIETI 183 VMAIGSGGNYALAAARAL++TDK AE I R+A++IAADIC+YTN N+ +E++ Sbjct: 130 VMAIGSGGNYALAAARALIETDKSAEEIARKAMNIAADICIYTNHNIIVESL 181 >SMc02575 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Sme Sinorhizobium meliloti Length = 185 Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 132/181 (72%), Positives = 152/181 (83%) Query: 3 ASPNELPVWHGTTICTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRRIGKGDVIGGFAGA 62 + N H TTI TVRKGGKVV+ GDGQVS+GQTV+K NA+KVRR+ KGDVI GFAGA Sbjct: 2 SEHNPYGTMHATTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRLSKGDVIAGFAGA 61 Query: 63 TADAFTLFERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGT 122 TADAFTL ERLE+KLEQYP QL RAAVELAKDWRT++YLR LEAMM+VAD+ V+L +TG Sbjct: 62 TADAFTLLERLEAKLEQYPDQLMRAAVELAKDWRTNKYLRNLEAMMLVADRTVTLAITGN 121 Query: 123 GDVLEPDSGVMAIGSGGNYALAAARALVDTDKDAETIVRRALDIAADICVYTNRNVTIET 182 GDVLEP+ G +AIGSGGNYA AAARAL+D+DK AE I RRAL+IA DICVYTN NV +ET Sbjct: 122 GDVLEPEHGTIAIGSGGNYAFAAARALMDSDKSAEEIARRALEIAGDICVYTNHNVVVET 181 Query: 183 I 183 + Sbjct: 182 L 182 >AGc70 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 217 Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 130/170 (76%), Positives = 150/170 (88%) Query: 14 TTICTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRRIGKGDVIGGFAGATADAFTLFERL 73 TTI TVRKGGKVV+ GDGQVS+GQTV+K NA+KVRRIGKG+VI GFAGATADAFTL +RL Sbjct: 45 TTIITVRKGGKVVMAGDGQVSLGQTVMKGNARKVRRIGKGEVIAGFAGATADAFTLLDRL 104 Query: 74 ESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLTGTGDVLEPDSGVM 133 E KLEQYPGQL RAAVELAKDWRTD+YLR LEAMM+VADK +L +TG GDVLEP+ G + Sbjct: 105 EKKLEQYPGQLMRAAVELAKDWRTDKYLRNLEAMMLVADKSTTLAITGNGDVLEPEHGAI 164 Query: 134 AIGSGGNYALAAARALVDTDKDAETIVRRALDIAADICVYTNRNVTIETI 183 AIGSGGNYA AAARA++DTDK AE + R++LDIAADICVYTN N+ +ET+ Sbjct: 165 AIGSGGNYAFAAARAMMDTDKSAEEVARQSLDIAADICVYTNHNLVVETL 214 >CC3727 [O] COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit Ccr Caulobacter vibrioides Length = 188 Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 123/188 (65%), Positives = 145/188 (77%), Gaps = 5/188 (2%) Query: 1 MQASPNELPVWHGTTICTVRKGGKVVIGGDGQVSIGQTVIKANAKKVRRIGKGDVIGGFA 60 MQ++ + P WHGTTI VRK G VI GDGQVS+G TV+K NA+KVRR+ G V+ GFA Sbjct: 1 MQSNSSSFPDWHGTTILAVRKNGSTVIAGDGQVSMGPTVVKGNARKVRRLAGGKVVAGFA 60 Query: 61 GATADAFTLFERLESKLEQYPGQLTRAAVELAKDWRTDRYLRRLEAMMIVADKDVSLVLT 120 GATADAFTL ERLE+KLEQYP QL RA V+LAKDWRTDRYLRRLEAM++VADK +T Sbjct: 61 GATADAFTLIERLEAKLEQYPDQLARACVDLAKDWRTDRYLRRLEAMLLVADKTAIYTVT 120 Query: 121 GTGDVLEPDS-----GVMAIGSGGNYALAAARALVDTDKDAETIVRRALDIAADICVYTN 175 G GDVLEP V AIGSGGNYALAA +AL+D D AE I R+A+ IAA+ICVYTN Sbjct: 121 GVGDVLEPGESLGGGAVAAIGSGGNYALAAGKALIDLDLSAEDIARKAMGIAAEICVYTN 180 Query: 176 RNVTIETI 183 N+T+E++ Sbjct: 181 GNLTVESL 188