BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0190.0014.p (256 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl1459 [E] COG0411 ABC-type branched-chain amino acid transport... 208 1e-53 RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport... 207 2e-53 BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transpo... 204 1e-52 TM1138 [E] COG0411 ABC-type branched-chain amino acid transport ... 202 5e-52 AF0823 [E] COG0411 ABC-type branched-chain amino acid transport ... 202 8e-52 >AGl1459 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 268 Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 106/248 (42%), Positives = 155/248 (62%), Gaps = 5/248 (2%) Query: 11 IILRTRGVGKTFGKFVALNNISAEFSRGAITSIIGPNGAGKSTYFNLLCGALAPTKGSVE 70 ++L RG+ KTFG F A+ N+ + + ++IGPNGAGK+T FNLL L PT G++ Sbjct: 22 VVLSARGLTKTFGAFAAVKNVDLDVHHARVHALIGPNGAGKTTVFNLLTKFLQPTGGAIT 81 Query: 71 FEGKDVTGLPQHRFAHMGIAKSFQITSVFPQLTTRENIRVGLQ---ALVSRYDIWRPRAR 127 F G D+T P + A +G+ +SFQI++VFP LT EN+RV LQ +L +++ W P + Sbjct: 82 FMGTDITKTPPDKVARLGLVRSFQISAVFPHLTVLENVRVALQRPNSLATQF--WLPLSS 139 Query: 128 LTELVERADELLALVGLWDSRERAAKTLAHGEQRALEIGMALASQPRLLLLDEPTAGMSP 187 L L RA+EL+++VGL + A L++G +R LEI LA P++LLLDEP AGM Sbjct: 140 LDRLNARAEELISMVGLTREKNALAADLSYGRKRVLEIATTLALDPKVLLLDEPMAGMGG 199 Query: 188 EETRTMMDLIVKLAKERTVILVEHKMKLVLGISDRILVLHHGELLAEGTPQEVRQNEAVK 247 E+ + +LI ++AK R V++VEH +K+V I + VL GE+LAEG V + V+ Sbjct: 200 EDVSHVAELIREVAKTRAVLMVEHNLKVVADICHHVTVLQRGEILAEGDYAAVSADPRVR 259 Query: 248 RVYLGQRE 255 Y+G E Sbjct: 260 TAYMGTEE 267 >RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 256 Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 108/245 (44%), Positives = 157/245 (64%), Gaps = 1/245 (0%) Query: 9 KEIILRTRGVGKTFGKFVALNNISAEFSRGAITSIIGPNGAGKSTYFNLLCGALAPTKGS 68 ++IIL TRG+ K F F A+++++ RG+I ++IGPNGAGK+T FNLL L PT+G+ Sbjct: 3 QDIILETRGLTKAFKGFTAVSDVNLRVRRGSIHALIGPNGAGKTTCFNLLTKFLVPTRGT 62 Query: 69 VEFEGKDVTGLPQHRFAHMGIAKSFQITSVFPQLTTRENIRVGLQ-ALVSRYDIWRPRAR 127 + F G D+T + A G+ +SFQI++VFP L+ EN+R+GLQ L + Y WR Sbjct: 63 ILFNGVDITPERPAQIARRGVIRSFQISAVFPHLSVLENVRIGLQRQLGTAYAFWRSEKT 122 Query: 128 LTELVERADELLALVGLWDSRERAAKTLAHGEQRALEIGMALASQPRLLLLDEPTAGMSP 187 L L +RA +LL VGL L +G +RALEI LA +P L+LLDEPT GM Sbjct: 123 LAVLNDRAMQLLDQVGLTPFAGTVTVELPYGRKRALEIATTLAMEPELMLLDEPTQGMGH 182 Query: 188 EETRTMMDLIVKLAKERTVILVEHKMKLVLGISDRILVLHHGELLAEGTPQEVRQNEAVK 247 E+ + +LI ++A+ RT+++VEH M +V I+D+I VL G++LAEG ++V +N V Sbjct: 183 EDVDRVTELIQRVAEGRTILMVEHNMNVVSSIADKITVLQRGQILAEGPYEDVSKNPQVM 242 Query: 248 RVYLG 252 Y+G Sbjct: 243 EAYMG 247 >BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 251 Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 107/253 (42%), Positives = 162/253 (64%), Gaps = 8/253 (3%) Query: 8 TKEIILRTRGVGKTFGKFVALNNISAEFSRGAITSIIGPNGAGKSTYFNLLCGALAPTKG 67 TK+I++ + + K+FG + ++ G ++IGPNGAGKST F+L+ G P+ G Sbjct: 3 TKDILVLDQ-LNKSFGPAHIIRGVNLAVRDGERHAVIGPNGAGKSTLFHLISGNFTPSSG 61 Query: 68 SVEFEGKDVTGLPQHRFAHMGIAKSFQITSVFPQLTTRENIRVGLQALVSRYDI----WR 123 S+ F+G+++ GL G+A+SFQIT++FP LT ENIR+ A++ RY + WR Sbjct: 62 SIRFQGEEIGGLTPAAVNRKGLARSFQITNIFPGLTVFENIRL---AVMRRYKVQFTFWR 118 Query: 124 PRARLTELVERADELLALVGLWDSRERAAKTLAHGEQRALEIGMALASQPRLLLLDEPTA 183 P + + ++ + LL V L A L++ EQR+LEIGM LAS PRL++LDEP A Sbjct: 119 PVSSMRKVTAEVESLLEQVRLTARAYTLASQLSYSEQRSLEIGMTLASDPRLIILDEPMA 178 Query: 184 GMSPEETRTMMDLIVKLAKERTVILVEHKMKLVLGISDRILVLHHGELLAEGTPQEVRQN 243 GMS EET + LI ++ + RT+++VEH M +V ++DRI VL +GE++A GTP+E+R+N Sbjct: 179 GMSQEETDYTVGLIREITQNRTLMIVEHDMYVVFTLADRISVLVYGEIIATGTPKEIREN 238 Query: 244 EAVKRVYLGQREH 256 V+ YLG+ H Sbjct: 239 ARVREAYLGEEAH 251 >TM1138 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Tma Thermotoga maritima Length = 284 Score = 202 bits (515), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 107/275 (38%), Positives = 165/275 (60%), Gaps = 27/275 (9%) Query: 6 DQTKEIILRTRGVGKTFGKFVALNNISAEFSRGAITSIIGPNGAGKSTYFNLLCGALAPT 65 D +K+ +L V FG VA+++ + E G + +IGPNGAGK+T FN++ G PT Sbjct: 5 DLSKKPLLLLDHVTMQFGGLVAVDDFTNEIREGELVGLIGPNGAGKTTVFNVITGIYTPT 64 Query: 66 KGSVEFEGKDVTGLPQHRFAHMGIAKSFQITSVFPQLTTRENIRVGLQALVS-------- 117 KG + F D+TGL ++ H+GIA++FQ +F +T EN+ V ++S Sbjct: 65 KGRIVFNDIDITGLRPYQITHLGIARTFQNIRLFSDMTVLENVLVAQHHVLSNPDADRIL 124 Query: 118 -----------RYDIWRPRARL------TELVERADELLALVGLWDSRERAAKTLAHGEQ 160 R+ WR ++ E+VERA +L+ VGL A +L +GEQ Sbjct: 125 VKHGKPRKGHGRFWFWRAVTKIGYLKKEKEMVERAKDLIKRVGLEKVMYEKASSLPYGEQ 184 Query: 161 RALEIGMALASQPRLLLLDEPTAGMSPEETRTMMDLIVKLAKE--RTVILVEHKMKLVLG 218 R LEI ALA++P+L+LLDEP AGM+P+ET +M+ I ++ K+ TV+L+EH MK+V+G Sbjct: 185 RKLEIARALATEPKLILLDEPAAGMNPKETEDLMEFIKQIRKDFNLTVLLIEHDMKVVMG 244 Query: 219 ISDRILVLHHGELLAEGTPQEVRQNEAVKRVYLGQ 253 I +RI+V+ +G ++AEGTP+E++ + V YLG+ Sbjct: 245 ICERIIVMDYGRIIAEGTPKEIQNDPRVIEAYLGR 279 >AF0823 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Afu Archaeoglobus fulgidus Length = 248 Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 107/252 (42%), Positives = 159/252 (63%), Gaps = 18/252 (7%) Query: 12 ILRTRGVGKTFGKFVALNNISAEFSRGAITSIIGPNGAGKSTYFNLLCGALAPTKGSVEF 71 +L+ GVG FG +ALNN++ E +G + IIGPNGAGK+T FN++ G P +G + F Sbjct: 1 MLKVEGVGIRFGGLIALNNVTFEIRKGEVLGIIGPNGAGKTTLFNVISGLYKPDEGVIIF 60 Query: 72 EGKDVTGLPQHRFAHMGIAKSFQITSVFPQLTTRENIRVGLQALVSRYDIWRPRARLTEL 131 EGK++T +P H+ +GI+++FQ S++ L N+ + L A W L+ L Sbjct: 61 EGKNITTMPPHKIVRLGISRTFQTVSLYFNLPAIGNLLITLTA-------WYRSGVLSAL 113 Query: 132 VE--------RADELLALVGLWDSRERAAKTLAHGEQRALEIGMALASQPRLLLLDEPTA 183 E A ELL VGL + K L QR L I +ALA++P+LLLLDEPTA Sbjct: 114 REENGDETFKEAMELLNFVGLDEKAFTPVKNLPQEAQRRLSIAIALATKPKLLLLDEPTA 173 Query: 184 GMSPEETRTMMDLIVKLAKER--TVILVEHKMKLVLGISDRILVLHHGELLAEGTPQEVR 241 G++ EET +++ I++ KER TV ++EHKM+ ++G+SDRI+VL GE++AEG+P+E+ Sbjct: 174 GLNLEETDRILE-IIRTLKERGVTVAIIEHKMRFIMGVSDRIVVLDSGEIIAEGSPKEIV 232 Query: 242 QNEAVKRVYLGQ 253 +NE V + YLG+ Sbjct: 233 ENERVIKAYLGE 244