BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0190.0013.p (328 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3340 [E] COG4177 ABC-type branched-chain amino acid transport... 192 1e-48 SMc03117 [E] COG4177 ABC-type branched-chain amino acid transpor... 190 5e-48 AGl1453 [E] COG4177 ABC-type branched-chain amino acid transport... 179 6e-45 mll4887 Non COG 167 3e-41 BMEII0340 [E] COG4177 ABC-type branched-chain amino acid transpo... 167 4e-41 >RSc3340 [E] COG4177 ABC-type branched-chain amino acid transport system, permease component Rso Ralstonia solanacearum Length = 328 Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 123/310 (39%), Positives = 179/310 (57%), Gaps = 20/310 (6%) Query: 32 AVILIFPLVMPFTALAVNILIYGLYAVGFNLVFGYLGLLSFGHAALFGTGAYLCGIAIVH 91 A +++ PL + +L + L+A FNL+ GY GLLSFGHAA FG Y+ G + Sbjct: 17 AALIVAPLAGAYPVFVAKLLCFALFASAFNLLLGYTGLLSFGHAAFFGGAGYVAGYLMRD 76 Query: 92 FGWPWYAAIAAGIAGGLLMASLIGVLAIRTRGIYFAMVTMALSQCIYYLFYQAVDLTGGE 151 + AG A G L+ ++G+LAIR +GIYFAM+T+AL+Q Y+ QA TGGE Sbjct: 77 LNLTPELGLIAGTAAGALIGLVVGLLAIRRQGIYFAMITLALAQMFYFFCLQA-PFTGGE 135 Query: 152 NGLRGINVRTIDLFGLRLDFINPMIRYYVIAAFVIAAFFVMSRILASPFGAVIEAVRENE 211 +GL+G V L G+ LD + + YY + A V+ AF ++ R + SPFG +++A++ENE Sbjct: 136 DGLQG--VPRGKLLGM-LDLSSDLTLYYFVLAVVVVAFLLIVRTIHSPFGQILKAIKENE 192 Query: 212 MRARASGYDVTKTRLLTFVLSGGFCGLAGALQALHLSIVPIEILHYETSGLVVMIALLGG 271 RA + GYD + +LL FVLS GLAGAL+ L L + +H+ SG V+++ L+GG Sbjct: 193 PRAISLGYDTDRFKLLAFVLSAALSGLAGALKTLVLGFETLTDVHWAMSGSVILMTLVGG 252 Query: 272 MGTFFGPMIGAAVFLVLENVV----------------SVWTVHWQLIVGAIFIACVLFFP 315 +G GP++GAA+ + LEN + +V + GAIF+ CVL F Sbjct: 253 LGILSGPILGAALVIALENKLGDLGAFLAGATGMDGFNVLGESVTTVTGAIFVICVLTFR 312 Query: 316 AGIWGTLIAR 325 GI G + AR Sbjct: 313 RGIMGEIAAR 322 >SMc03117 [E] COG4177 ABC-type branched-chain amino acid transport system, permease component Sme Sinorhizobium meliloti Length = 330 Score = 190 bits (482), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 116/299 (38%), Positives = 171/299 (57%), Gaps = 7/299 (2%) Query: 32 AVILIFPLVMPFTALAVNILIYGLYAVGFNLVFGYLGLLSFGHAALFGTGAYLCGIAIVH 91 A +L+ PL + + IL + L+A FNL+ GY GLLSFGHAA FG AY A+ Sbjct: 28 ACLLLAPLFF-YPVFLMKILCFALFACAFNLLLGYTGLLSFGHAAFFGGAAYFTAHAVKE 86 Query: 92 FGWPWYAAIAAGIAGGLLMASLIGVLAIRTRGIYFAMVTMALSQCIYYLFYQAVDLTGGE 151 +G P I G+ G L+ +++G AIR +GIYFAM+T+AL+Q Y+ QA T GE Sbjct: 87 WGVPPELGILLGVVGAALLGAVVGFFAIRRQGIYFAMITLALAQMFYFFCLQA-GFTRGE 145 Query: 152 NGLRGINVRTIDLFGLRLDFINPMIRYYVIAAFVIAAFFVMSRILASPFGAVIEAVRENE 211 +G++ +V L G +D P YY + A + ++ RI+ SPFG +++++RENE Sbjct: 146 DGIQ--SVPRGHLLGF-IDLSQPTNMYYFVLAVFVIGIAMIWRIINSPFGMILKSIRENE 202 Query: 212 MRARASGYDVTKTRLLTFVLSGGFCGLAGALQALHLSIVPIEILHYETSGLVVMIALLGG 271 RA + GY V +L FV+S GLAG L+AL + + ++ SG V+++ LLGG Sbjct: 203 TRAISLGYSVRNYKLAAFVMSAALTGLAGGLKALVFQFATLTDVSWQMSGEVILMTLLGG 262 Query: 272 MGTFFGPMIGAAVFLVLENVVSVWTVHWQLIVGAIFIACVLFFPAGIWGTLIAR--GRR 328 +GT GP+ GA + + L+N ++ +I G +F+ CVL F GI G GRR Sbjct: 263 IGTLIGPLFGAGLVVTLQNYLATSEFPVTIITGIVFMVCVLLFRRGIVGEFYNSRLGRR 321 >AGl1453 [E] COG4177 ABC-type branched-chain amino acid transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 335 Score = 179 bits (455), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 121/304 (39%), Positives = 180/304 (59%), Gaps = 12/304 (3%) Query: 27 ASIVAAVILIFPLVMPFTALAVNILIYGLYAVGFNLVFGYLGLLSFGHAALFGTGAYLCG 86 A ++AA + ++P+ + + +L + L+A FNL+ GY GLLSFGHAA FG AY Sbjct: 35 AVLIAAPMFVYPIFL------MKLLCFALFACAFNLLIGYTGLLSFGHAAFFGGAAYFTA 88 Query: 87 IAIVHFGWPWYAAIAAGIAGGLLMASLIGVLAIRTRGIYFAMVTMALSQCIYYLFYQAVD 146 ++ +G + G+AG L+ +IG AIR +GIYFAM+T+ALSQ Y+ QA Sbjct: 89 YSVKEWGVTPEIGLIIGMAGAALLGLVIGFFAIRRQGIYFAMITLALSQMFYFFCLQA-P 147 Query: 147 LTGGENGLRGINVRTIDLFGLRLDFINPMIRYYVIAAFVIAAFFVMSRILASPFGAVIEA 206 T GE+GL+G V LFGL LD P+ YY + A + A V+ R + SPFG ++++ Sbjct: 148 FTHGEDGLQG--VPRGHLFGL-LDLNAPLNIYYTVLAAFVLALLVIWRFVNSPFGMILKS 204 Query: 207 VRENEMRARASGYDVTKTRLLTFVLSGGFCGLAGALQALHLSIVPIEILHYETSGLVVMI 266 +RENE RA + GY V + +L FV+S GLAG L+AL + + ++ SG V+++ Sbjct: 205 IRENEQRAISLGYSVQRYKLGAFVMSAALAGLAGGLKALVFQFATLTDVTWQMSGEVILM 264 Query: 267 ALLGGMGTFFGPMIGAAVFLVLENVVSVWTVHWQLIVGAIFIACVLFFPAGIWGTLIAR- 325 LLGG+GT GP+ GA + + L+N ++ +I G +F+ACVL F G+ G A Sbjct: 265 TLLGGIGTMIGPIFGAGLVVTLQNYLATSDFPVTIITGLVFMACVLVFRRGLIGEFYASR 324 Query: 326 -GRR 328 GR+ Sbjct: 325 LGRK 328 >mll4887 Non COG Length = 320 Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 109/299 (36%), Positives = 159/299 (53%), Gaps = 3/299 (1%) Query: 30 VAAVILIFPLVMP--FTALAVNILIYGLYAVGFNLVFGYLGLLSFGHAALFGTGAYLCGI 87 V A++ + V+P + L I++ ++A+G+N++FGY+GLLS GHA FG G Y G+ Sbjct: 16 VIALLFVLSFVLPEYYHGLLARIMVLAVFAMGYNMLFGYVGLLSLGHAMFFGAGLYGAGL 75 Query: 88 AIVHFGWPWYAAIAAGIAGGLLMASLIGVLAIRTRGIYFAMVTMALSQCIYYLFYQAVDL 147 AI+ GW A GIA G ++A +IG+LA+R G+ F +VTM +Q Y L Sbjct: 76 AIIQLGWGVPLAFLGGIASGAVLALVIGLLALRATGVAFMIVTMMFAQVFYLLILYFAAW 135 Query: 148 TGGENG-LRGINVRTIDLFGLRLDFINPMIRYYVIAAFVIAAFFVMSRILASPFGAVIEA 206 TGG+ G + R ++L LD NP +RY + ++ S +G V+ A Sbjct: 136 TGGDQGQVVPQPARALNLGATSLDLTNPTVRYMSALVLFSLVLLLTLAVVRSRYGRVLVA 195 Query: 207 VRENEMRARASGYDVTKTRLLTFVLSGGFCGLAGALQALHLSIVPIEILHYETSGLVVMI 266 +RENE R + GYD +L+ V+SG C +GA AL V + S L ++ Sbjct: 196 IRENEERTKMLGYDTFSNKLIAVVVSGTICAASGAAYALLFGYVGSSFASVQYSILPLLW 255 Query: 267 ALLGGMGTFFGPMIGAAVFLVLENVVSVWTVHWQLIVGAIFIACVLFFPAGIWGTLIAR 325 LLGG T GP+IG + +V S +T + LIVG I VLFFP GI G++ R Sbjct: 256 VLLGGAATTLGPLIGTVFMYYVIDVSSGYTSAYLLIVGIALILLVLFFPKGILGSIRQR 314 >BMEII0340 [E] COG4177 ABC-type branched-chain amino acid transport system, permease component Bme Brucella melitensis Length = 331 Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 120/325 (36%), Positives = 181/325 (55%), Gaps = 9/325 (2%) Query: 6 ESIKQPRATAGSWYEFAT--RHRASIVAAVILIFPLVMPFTALAV---NILIYGLYAVGF 60 ++ +P A + Y A ++IV + L+ + PF + +L + L+A F Sbjct: 3 DTTLKPTLKANAAYSKAPALNSLSAIVLGIALVGLIAAPFMVYPIFLMKMLCFALFASAF 62 Query: 61 NLVFGYLGLLSFGHAALFGTGAYLCGIAIVHFGWPWYAAIAAGIAGGLLMASLIGVLAIR 120 NL+ GY G+LSFGHAA FG AY+ A+ +G + GI + +IG LAIR Sbjct: 63 NLLLGYTGILSFGHAAFFGAAAYVTAHAVKEWGVSPELGLVLGILAAAALGLVIGYLAIR 122 Query: 121 TRGIYFAMVTMALSQCIYYLFYQAVDLTGGENGLRGINVRTIDLFGLRLDFINPMIRYYV 180 +GIY M+T+AL+Q ++ QA T GE+GL+G+ R LFG +D PM YY Sbjct: 123 RQGIYSTMITLALAQMFFFFCLQA-SFTHGEDGLQGVP-RGF-LFGF-IDLNQPMNMYYF 178 Query: 181 IAAFVIAAFFVMSRILASPFGAVIEAVRENEMRARASGYDVTKTRLLTFVLSGGFCGLAG 240 + A + F + RI SPFG ++++VRENE RA + G+ V +L FV+S G GLAG Sbjct: 179 VLAVFVLGVFAIWRITNSPFGMILKSVRENENRAISLGFSVNHYKLAAFVMSAGLAGLAG 238 Query: 241 ALQALHLSIVPIEILHYETSGLVVMIALLGGMGTFFGPMIGAAVFLVLENVVSVWTVHWQ 300 ++AL + + ++ SG V+++ LLGG+GT GP++GAA + L+N ++ Sbjct: 239 GMKALVFQFATLTDVSWQMSGEVILMTLLGGIGTLIGPIVGAAFVVALKNWLATSDFPVT 298 Query: 301 LIVGAIFIACVLFFPAGIWGTLIAR 325 ++ G IF+ACVL F GI G A Sbjct: 299 IVTGLIFMACVLLFRKGIIGEFYAS 323