BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0187.0026.p         (254 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO0080 [P] COG0725 ABC-type molybdate transport system, peripla...    79   1e-14

>YPO0080 [P] COG0725 ABC-type molybdate transport system, periplasmic
           component Ype Yersinia pestis
          Length = 272

 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 112/236 (47%), Gaps = 10/236 (4%)

Query: 1   MTEQATAAAALTPAIADGPQTIKVIISGGFASVYRDVLPEFERSTGISVETGSGASEGTG 60
           M   ATAA    P+  D P T+++I S        +V+ +F + +   VE      E  G
Sbjct: 29  MVSLATAAPTEVPS--DEPVTLRIISSMATRQFLTEVIAQFAQQSKYQVEL-----ESVG 81

Query: 61  PKTIRHQLANGTKADVVILSREGLRSLTEDGRIRAGSEAGLATAPLAAAVRAGSRKPDIG 120
                 ++  G   DVVILS   +  L + G+I   S   L  + +A AV+ G++  D+ 
Sbjct: 82  GVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEGAQIMDVS 141

Query: 121 NDIALRKALIDAGQVVAPSSTSGQYVRDKVFPRLNLPDTV--RLTLEARGTEAAEVLRAG 178
           ++  +++A++ A  +   +  SG Y+ + VF    + + +  R+     G     ++  G
Sbjct: 142 SEETVKQAVLAANTIAYSTGPSGVYLTE-VFEHWGIAEQIKDRIVKVPPGVPVGSLVAKG 200

Query: 179 KANLSIGPTSELVQESGIEVVGLLPPDLQLVQTFTAAIVSDAQAPEAAKRLIDFLS 234
           +  L     SEL+   GI ++G LP D+Q++  F+A +       +A K L+DFL+
Sbjct: 201 EVELGFQQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPLKTNQQKAIKVLLDFLA 256