BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0082.p (193 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl2357 [O] COG1225 Peroxiredoxin Atu Agrobacterium tumefaciens ... 201 1e-51 Ta0357 [O] COG1225 Peroxiredoxin Tac Thermoplasma acidophilum 66 6e-11 >AGl2357 [O] COG1225 Peroxiredoxin Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 190 Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 103/173 (59%), Positives = 124/173 (71%), Gaps = 2/173 (1%) Query: 17 PTDDGGAAHLTGMTIPPVRLRATDDTAVALSALKGRTVVFAYPRTGEPGKIGLVDDWDMI 76 P DDG A HL GM +P V L ATD T V L G +VV+AYPRT PG +D W+ I Sbjct: 13 PHDDGAAKHLPGMEMPDVTLAATDGTTVDLRG-PGLSVVYAYPRTSPPGG-NAIDGWEEI 70 Query: 77 PGARGCTPQACAFRDLFAELKSAGAAQVFGLSTQSNAYQTEMASRLHLPFPVLSDDALEM 136 PGARGCTPQ+CAFRD FAEL+ GA+ +FGLSTQ++ YQ E A RLHLPFP+LSD +L + Sbjct: 71 PGARGCTPQSCAFRDHFAELRGLGASNLFGLSTQTSEYQREAAERLHLPFPLLSDHSLSL 130 Query: 137 TRTLRLPTMSVAGLTLIKRLALVIDDARITHVFYPVFPPDRNAGDVLAWLKAN 189 ++L LP GLTL+KRL +VI+D RI HVFYPV PPD+NA V+ WLK N Sbjct: 131 AKSLSLPMFEAGGLTLLKRLTMVIEDGRIKHVFYPVDPPDKNADAVIVWLKTN 183 >Ta0357 [O] COG1225 Peroxiredoxin Tac Thermoplasma acidophilum Length = 153 Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 25/146 (17%) Query: 44 VALSALKGRTVV-FAYPRTGEPGKIGLVDDWDMIPGARGCTPQACAFRDLFAELKSAGAA 102 V LS+ +G+ VV + YP+ PG CT +AC FRD F K +G Sbjct: 23 VKLSSYRGKPVVLYFYPKDNTPG----------------CTTEACNFRDNFNSFKDSG-V 65 Query: 103 QVFGLSTQSNAYQTEMASRLHLPFPVLSDDALEMTRTLRLPTMSVAGLTLIKRLALVID- 161 +V G+S S + A + +L F + SD + ++ + V GL KR+ +ID Sbjct: 66 EVIGVSVDSPESHKKFAEKYNLNFTLASDKSKDIVK-----KYGVLGLATAKRVTYIIDP 120 Query: 162 DARITHVFYPVFPPDRNAGDVLAWLK 187 D +I +V YP P +A +V+ LK Sbjct: 121 DGKIAYV-YPKVTPKDHALEVMNKLK 145