BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0079.p (296 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI1301 [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneura... 392 e-109 mlr7746 [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuram... 380 e-105 AGc1883 [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuram... 370 e-102 SMc02404 [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneura... 363 e-100 CC1195 [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneurami... 356 3e-98 >BMEI1301 [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase Bme Brucella melitensis Length = 307 Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust. Identities = 190/292 (65%), Positives = 229/292 (78%), Gaps = 2/292 (0%) Query: 7 FRGSFTALVTPF-KNGSVDEAAFRSLVNWQIAEGTHGLVPVGTTGESPTLSHDEHKRVVE 65 +GS TALVTPF + G+ DE AFR+ VNWQI EGT GLVPVGTTGE+PTLSHDEHKRV+E Sbjct: 16 LKGSITALVTPFDREGAFDEKAFRAFVNWQIEEGTKGLVPVGTTGETPTLSHDEHKRVIE 75 Query: 66 WCIEEAKGRVPVIAGAGSNSTKEAIELAEHAEKAGATAVLVVTPYYNKPTQEGMYQHFKA 125 CIE A GRVPVIAGAGSN+T EAIELA+HAEKAGA AVLVVTPYYNKP Q G+Y+HF Sbjct: 76 VCIEVAAGRVPVIAGAGSNNTVEAIELAQHAEKAGADAVLVVTPYYNKPNQRGLYEHFSR 135 Query: 126 INDAIGIPIIIYNIPPRSVIDMSVDTMKRLF-ELKNIAGVKDATASMVRVSQQRAAMGED 184 + +I IP++IYNIP RS+IDM+ +TM L + KNI GVKDAT + RVS+QRA G++ Sbjct: 136 VARSISIPLVIYNIPGRSIIDMTPETMGALVRDCKNIVGVKDATGKIERVSEQRAICGKE 195 Query: 185 FNQLSGEDATIIGYMAHGGHGCISVTSNVAPRLCSEFQTAWQKGDVTTALKIHDKLMPLH 244 F QLSGEDAT +G+ AHGG GCISVTSN+APRLC+EFQ A Q G+ AL++ D+LMPLH Sbjct: 196 FIQLSGEDATALGFNAHGGVGCISVTSNIAPRLCAEFQEACQAGNFAKALELQDRLMPLH 255 Query: 245 TNLFIESNPAPVKYAMSLLGKLDEKLRLPMVPVTEATRQAVRSAMVHAGLIN 296 LF+E NP+ KYA+S LG+++ LR PMV + AT + + AM HA LIN Sbjct: 256 KALFLEPNPSGPKYALSRLGRIENVLRSPMVTIEAATAEKIDHAMKHAVLIN 307 >mlr7746 [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase Mlo Mesorhizobium loti Length = 305 Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust. Identities = 186/292 (63%), Positives = 223/292 (76%), Gaps = 2/292 (0%) Query: 7 FRGSFTALVTPF-KNGSVDEAAFRSLVNWQIAEGTHGLVPVGTTGESPTLSHDEHKRVVE 65 RGS TALVTPF K+G DE AFR+ V WQ+ EGT GLVPVGTTGESPTLSHDEH+ VV+ Sbjct: 14 LRGSLTALVTPFEKSGRFDEKAFRAFVEWQLGEGTTGLVPVGTTGESPTLSHDEHRHVVK 73 Query: 66 WCIEEAKGRVPVIAGAGSNSTKEAIELAEHAEKAGATAVLVVTPYYNKPTQEGMYQHFKA 125 CIE A GR PV+AGAGSN+T EA+ L ++AEKAGA A LVVTPYYNKPTQ G+Y+HF A Sbjct: 74 VCIEVANGRAPVVAGAGSNNTAEAVGLVQYAEKAGADAALVVTPYYNKPTQRGLYEHFAA 133 Query: 126 INDAIGIPIIIYNIPPRSVIDMSVDTMKRL-FELKNIAGVKDATASMVRVSQQRAAMGED 184 + A +PIIIYNIPPRSVIDM +TM RL + KNI GVKDAT + RVS+QR G+D Sbjct: 134 VARATKLPIIIYNIPPRSVIDMMPETMGRLAHDFKNIVGVKDATGKVERVSEQRMTCGKD 193 Query: 185 FNQLSGEDATIIGYMAHGGHGCISVTSNVAPRLCSEFQTAWQKGDVTTALKIHDKLMPLH 244 F QLSGEDA+ +G+ AHGG GCISVTSNVAPRLC+EFQ A GD AL++ D+L+PLH Sbjct: 194 FIQLSGEDASALGFNAHGGVGCISVTSNVAPRLCAEFQEATLSGDSVKALELQDRLLPLH 253 Query: 245 TNLFIESNPAPVKYAMSLLGKLDEKLRLPMVPVTEATRQAVRSAMVHAGLIN 296 +F+E + KYA+S LGK++ LR P+V V E+T + +AM HAGLIN Sbjct: 254 KAIFLEPGVSGAKYALSKLGKVENVLRSPLVTVEESTAAKIDAAMKHAGLIN 305 >AGc1883 [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 294 Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/293 (62%), Positives = 225/293 (76%), Gaps = 3/293 (1%) Query: 7 FRGSFTALVTPF-KNGSVDEAAFRSLVNWQIAEGTHGLVPVGTTGESPTLSHDEHKRVVE 65 F+GS AL+TPF NGSVDE AF + V WQIAEG++GLVPVGTTGESPTLSHDEHKRVVE Sbjct: 2 FKGSIPALITPFTDNGSVDEKAFAAHVEWQIAEGSNGLVPVGTTGESPTLSHDEHKRVVE 61 Query: 66 WCIEEAKGRVPVIAGAGSNSTKEAIELAEHAEKAGATAVLVVTPYYNKPTQEGMYQHFKA 125 CIE A RVPVIAGAGSN+T EAIELA HA++AGA A+LVVTPYYNKPTQ+G++ HF A Sbjct: 62 LCIEVAAKRVPVIAGAGSNNTDEAIELALHAQEAGADALLVVTPYYNKPTQKGLFAHFSA 121 Query: 126 INDAIGIPIIIYNIPPRSVIDMSVDTMKRLFEL-KNIAGVKDATASMVRVSQQRAAMGED 184 + +A+ +PI+IYNIPPRSV+DMS +TM L + KNI GVKDAT + RVS+QR + G+D Sbjct: 122 VAEAVKLPIVIYNIPPRSVVDMSPETMGALVKAHKNIIGVKDATGKLDRVSEQRISCGKD 181 Query: 185 FNQLSGEDATIIGYMAHGGHGCISVTSNVAPRLCSEFQTAWQKGDVTTALKIHDKLMPLH 244 F QLSGED T +G+ AHGG GCISVT+NVAPRLCSEFQ A GD AL+ D+LMPLH Sbjct: 182 FVQLSGEDGTALGFNAHGGVGCISVTANVAPRLCSEFQAAMLAGDYAKALEYQDRLMPLH 241 Query: 245 TNLFIESNPAPVKYAMSLLGKLDEKLRLPMVPVTE-ATRQAVRSAMVHAGLIN 296 +F+E KYA+S + ++R P++ E AT A+ +A+ HAGL+N Sbjct: 242 RAIFMEPGVCGTKYALSKTRGGNRRVRSPLMSTLEPATEAAIDAALKHAGLMN 294 >SMc02404 [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase Sme Sinorhizobium meliloti Length = 294 Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust. Identities = 180/293 (61%), Positives = 224/293 (76%), Gaps = 3/293 (1%) Query: 7 FRGSFTALVTPFKN-GSVDEAAFRSLVNWQIAEGTHGLVPVGTTGESPTLSHDEHKRVVE 65 F+GS ALVTPF GSVD +F + V WQI EG+HGLVPVGTTGESPTLSHDEHK+VVE Sbjct: 2 FKGSIPALVTPFTAAGSVDADSFVAHVEWQIKEGSHGLVPVGTTGESPTLSHDEHKKVVE 61 Query: 66 WCIEEAKGRVPVIAGAGSNSTKEAIELAEHAEKAGATAVLVVTPYYNKPTQEGMYQHFKA 125 C+E + RVPVIAGAGSN+T EAIELA+HAEKAGA A+LVVTPYYNKPTQ+G++ HF A Sbjct: 62 LCVEASARRVPVIAGAGSNNTIEAIELAQHAEKAGADAILVVTPYYNKPTQKGLFAHFAA 121 Query: 126 INDAIGIPIIIYNIPPRSVIDMSVDTMKRLFELK-NIAGVKDATASMVRVSQQRAAMGED 184 I +++ +PI+IYNIP RSV+DMSV+TM L + I GVKDAT + RVS+QR A G+ Sbjct: 122 IAESVKLPIVIYNIPGRSVVDMSVETMAALAKAHPTIVGVKDATGRIERVSEQRMACGKA 181 Query: 185 FNQLSGEDATIIGYMAHGGHGCISVTSNVAPRLCSEFQTAWQKGDVTTALKIHDKLMPLH 244 F QLSGEDAT +G+ AHGG GCISVT+NVAPRLC+EFQ A G+ AL++ DKLMPLH Sbjct: 182 FVQLSGEDATALGFNAHGGVGCISVTANVAPRLCAEFQEATLAGNYAKALELQDKLMPLH 241 Query: 245 TNLFIESNPAPVKYAMSLLGKLDEKLRLPMVPVTE-ATRQAVRSAMVHAGLIN 296 +F+E KYA++ LG++ +R P++ E AT A+ +A+ HAGL+N Sbjct: 242 KAIFLEPGVCGAKYALNRLGRMSFTVRSPLLSALEPATASAIDAALRHAGLMN 294 >CC1195 [EM] COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase Ccr Caulobacter vibrioides Length = 294 Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 170/291 (58%), Positives = 214/291 (73%) Query: 4 KTKFRGSFTALVTPFKNGSVDEAAFRSLVNWQIAEGTHGLVPVGTTGESPTLSHDEHKRV 63 ++ F+G ALVTPF++G VDE AF +LV QIA G HGLVPVGTTGE+ TLSH+EH+RV Sbjct: 3 QSHFKGVIPALVTPFRDGEVDEKAFVALVERQIAGGVHGLVPVGTTGETSTLSHEEHRRV 62 Query: 64 VEWCIEEAKGRVPVIAGAGSNSTKEAIELAEHAEKAGATAVLVVTPYYNKPTQEGMYQHF 123 VE C++ GRVPVIAGAGSNST EAIELA HA+ GA A LVVTPYYN+P+QEGMYQH+ Sbjct: 63 VELCVKTTAGRVPVIAGAGSNSTDEAIELARHAKTVGADACLVVTPYYNRPSQEGMYQHY 122 Query: 124 KAINDAIGIPIIIYNIPPRSVIDMSVDTMKRLFELKNIAGVKDATASMVRVSQQRAAMGE 183 KAINDA+ +PI +YN+P R+ +D+S DT++RL +L NI G+KDAT + R+S QR G Sbjct: 123 KAINDAVELPIFVYNVPGRTGVDISNDTLERLAKLPNIVGIKDATGDLTRISFQRLMCGP 182 Query: 184 DFNQLSGEDATIIGYMAHGGHGCISVTSNVAPRLCSEFQTAWQKGDVTTALKIHDKLMPL 243 ++ LSG+D T +GYMAHGGHG ISVTSNVAP CS F A +G+ L D+L+ L Sbjct: 183 EWVMLSGDDPTALGYMAHGGHGVISVTSNVAPDACSAFMNACMQGEWEKGLYWQDRLVRL 242 Query: 244 HTNLFIESNPAPVKYAMSLLGKLDEKLRLPMVPVTEATRQAVRSAMVHAGL 294 H LF++S+PAP K+AM+ LG E +RLP+ E R A+ AM AGL Sbjct: 243 HKALFLDSSPAPTKFAMAQLGLCTEDVRLPITACAEGVRPAILEAMREAGL 293