BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0031.p (198 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr0688 [S] COG0344 Predicted membrane protein Mlo Mesorhizobium... 213 2e-55 BMEII0668 [S] COG0344 Predicted membrane protein Bme Brucella me... 211 7e-55 SMc01362 [S] COG0344 Predicted membrane protein Sme Sinorhizobiu... 204 1e-52 AGc2402 [S] COG0344 Predicted membrane protein Atu Agrobacterium... 194 1e-49 CC2446 [S] COG0344 Predicted membrane protein Ccr Caulobacter vi... 173 3e-43 >mlr0688 [S] COG0344 Predicted membrane protein Mlo Mesorhizobium loti Length = 195 Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 123/188 (65%), Positives = 145/188 (77%), Gaps = 1/188 (0%) Query: 10 AFLIGYLLGSIPFGMVLTRMAGTQDLRTVGSGNIGATNVLRTGRKGLAAATLLGDMLKGT 69 A + GYLLGSIPFG++LTR AG D+R +GSGNIGATNVLRTG KGLAAATLL D LKGT Sbjct: 8 ALVFGYLLGSIPFGLLLTRAAGLGDVRKIGSGNIGATNVLRTGNKGLAAATLLLDALKGT 67 Query: 70 VAVIIAGTIDGPNAAMLAALGAFLGHLFPVWLKFRGGKGVATYLGVLLGLFWPAALIFAV 129 AV+IAG P A+ A LGAFLGHLFPVWL F+GGKGVATYLGVL+GL W ALIFAV Sbjct: 68 AAVLIAGHFA-PETAVWAGLGAFLGHLFPVWLGFKGGKGVATYLGVLIGLAWQVALIFAV 126 Query: 130 IWLGTAYTTRYSSLSALIAAFVTPLFLWWFGHNALASLFAVLTLLLFYMHRENIQRLQAG 189 IWL A+ RYSSL+AL AA + P+ L++ +A LF V+++++F HR NI RL AG Sbjct: 127 IWLAMAFLFRYSSLAALTAAVIVPIALYFLSAPQIAVLFVVMSIIVFIKHRANISRLLAG 186 Query: 190 TEGKIGER 197 TEGKIG + Sbjct: 187 TEGKIGAK 194 >BMEII0668 [S] COG0344 Predicted membrane protein Bme Brucella melitensis Length = 201 Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 118/194 (60%), Positives = 148/194 (76%), Gaps = 1/194 (0%) Query: 4 DGLLPAAFLIGYLLGSIPFGMVLTRMAGTQDLRTVGSGNIGATNVLRTGRKGLAAATLLG 63 + +L A + GY+LGSIPFG++LTR+AG D+R +GSGNIGATNVLRTG K LAAATL+ Sbjct: 8 NAMLIGALIFGYVLGSIPFGLILTRLAGLGDVRAIGSGNIGATNVLRTGNKKLAAATLIL 67 Query: 64 DMLKGTVAVIIAGTIDGPNAAMLAALGAFLGHLFPVWLKFRGGKGVATYLGVLLGLFWPA 123 D LKGT A +IA G NAA+ A GAF+GHLFPVW+ F+GGKGVATYLGVL+GL W Sbjct: 68 DALKGTAAALIAAHF-GQNAAIAAGFGAFIGHLFPVWIGFKGGKGVATYLGVLIGLAWAG 126 Query: 124 ALIFAVIWLGTAYTTRYSSLSALIAAFVTPLFLWWFGHNALASLFAVLTLLLFYMHRENI 183 AL+FA W+ TA RYSSLSAL+A+ V P+ L+ G+ ALA+LFA++T+++F HR NI Sbjct: 127 ALVFAAAWIVTALLARYSSLSALVASLVVPIALYSRGNQALAALFAIMTVIVFIKHRANI 186 Query: 184 QRLQAGTEGKIGER 197 RL GTE KIG + Sbjct: 187 SRLLNGTESKIGAK 200 >SMc01362 [S] COG0344 Predicted membrane protein Sme Sinorhizobium meliloti Length = 203 Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 117/189 (61%), Positives = 138/189 (73%), Gaps = 1/189 (0%) Query: 9 AAFLIGYLLGSIPFGMVLTRMAGTQDLRTVGSGNIGATNVLRTGRKGLAAATLLGDMLKG 68 A + GYLLGSIPFG++LTRMAG D+R +GSGNIGATNVLRTG + LAAATLL D LKG Sbjct: 15 ACLVFGYLLGSIPFGLILTRMAGLGDVRKIGSGNIGATNVLRTGNRKLAAATLLFDALKG 74 Query: 69 TVAVIIAGTIDGPNAAMLAALGAFLGHLFPVWLKFRGGKGVATYLGVLLGLFWPAALIFA 128 T A IA + G A + A AFLGHLFPVWL FRGGKGVATY+GVLLGL L+FA Sbjct: 75 TAAAAIA-SYWGVEAGIAAGFAAFLGHLFPVWLSFRGGKGVATYIGVLLGLMPVMVLLFA 133 Query: 129 VIWLGTAYTTRYSSLSALIAAFVTPLFLWWFGHNALASLFAVLTLLLFYMHRENIQRLQA 188 IWL A TRYSSLSAL+A P+ L+ G+ +A LFAV+T + + HR NIQRL + Sbjct: 134 AIWLAMAKITRYSSLSALVATAAVPIALYAAGNGKVAGLFAVMTAIAWIKHRANIQRLLS 193 Query: 189 GTEGKIGER 197 GTE +IGE+ Sbjct: 194 GTESRIGEK 202 >AGc2402 [S] COG0344 Predicted membrane protein Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 205 Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 114/185 (61%), Positives = 141/185 (76%) Query: 13 IGYLLGSIPFGMVLTRMAGTQDLRTVGSGNIGATNVLRTGRKGLAAATLLGDMLKGTVAV 72 IGYLLGSIPFG++LTRMAG D+R +GSGNIGATNVLRTG K LAAATLL D LKGT AV Sbjct: 20 IGYLLGSIPFGLILTRMAGLGDVRKIGSGNIGATNVLRTGNKKLAAATLLLDALKGTAAV 79 Query: 73 IIAGTIDGPNAAMLAALGAFLGHLFPVWLKFRGGKGVATYLGVLLGLFWPAALIFAVIWL 132 ++A + G A+++A AFLGHLFPVWL F+GGKGVA Y+GVLLG L FA+IWL Sbjct: 80 LVANALWGYEASLVAGFFAFLGHLFPVWLGFKGGKGVAVYIGVLLGAAPLMMLAFALIWL 139 Query: 133 GTAYTTRYSSLSALIAAFVTPLFLWWFGHNALASLFAVLTLLLFYMHRENIQRLQAGTEG 192 TA+ TRYSSLSAL+A + P+ LW G A L +L+++ ++ HRENI+RL AGTE Sbjct: 140 ATAFITRYSSLSALLAMLIIPVALWVLGPEKTAMLVTLLSVISWWKHRENIRRLMAGTES 199 Query: 193 KIGER 197 +IG++ Sbjct: 200 RIGQK 204 >CC2446 [S] COG0344 Predicted membrane protein Ccr Caulobacter vibrioides Length = 218 Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 103/188 (54%), Positives = 125/188 (66%), Gaps = 3/188 (1%) Query: 14 GYLLGSIPFGMVLTRMAGTQDLRTVGSGNIGATNVLRTGRKGLAAATLLGDMLKGTVAVI 73 GYLLGSIPFG++ TR+ G D+R +GSGNIGATNVLR+GRK LAA TLLGD KG VAV+ Sbjct: 19 GYLLGSIPFGLIATRLGGAGDIRQIGSGNIGATNVLRSGRKDLAAITLLGDAGKGVVAVL 78 Query: 74 IAGTIDGPNAAMLAALG--AFLGHLFPVWLKFRGGKGVATYLGVLLGLFWPAALIFAVIW 131 +A + N A++A G AFLGHLFPVWLKF+GGKGVAT+ GVLL WP + W Sbjct: 79 LARYLTNGNPAIIALAGGSAFLGHLFPVWLKFKGGKGVATFYGVLLSAAWPVGVAAGATW 138 Query: 132 LGTAYTTRYSSLSALIAAFVTPLFLWWFGHN-ALASLFAVLTLLLFYMHRENIQRLQAGT 190 L A+ R SSL+AL AA + F F L + +L+F HRENI RL G Sbjct: 139 LAMAFLFRISSLAALTAAVLAAPFALAFDQPYPFMGLCLFMAVLIFIRHRENIARLLKGE 198 Query: 191 EGKIGERK 198 E KIG++K Sbjct: 199 EPKIGKKK 206