BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0183.0008.p (262 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC2064 [N] COG4786 Flagellar basal body rod protein Ccr Caulobac... 260 3e-69 TM1542 [N] COG4786 Flagellar basal body rod protein Tma Thermoto... 260 3e-69 STM1179 [N] COG4786 Flagellar basal body rod protein Sty Salmone... 257 2e-68 RSp0347 [N] COG4786 Flagellar basal body rod protein Rso Ralston... 257 2e-68 flgG [N] COG4786 Flagellar basal body rod protein Eco Escherichi... 254 9e-68 >CC2064 [N] COG4786 Flagellar basal body rod protein Ccr Caulobacter vibrioides Length = 262 Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 138/260 (53%), Positives = 181/260 (69%) Query: 1 MRALYTAATGMAAQELSVQVISNNIANLRTTGYKKQRAAFQDLIYDHVRRVGAQASDQNT 60 M+AL TAA+GMAAQ+L+V+VISNNIAN+ T G+K+QRA FQDL+Y + R G+Q+S Sbjct: 1 MQALRTAASGMAAQQLNVEVISNNIANMNTVGFKRQRAEFQDLLYQTIERAGSQSSSDGN 60 Query: 61 IMPMGIDLGGGVKTVGTPRMMTQGTLSPTGNDLDIAIRGEGFFKILMPDGTFTYTRDGSF 120 I+P G+ +GGGVK R+ QGT + T + LD+AI+G+G+ IL+P G YTR G+F Sbjct: 61 IVPTGVQVGGGVKAGSVYRITEQGTPTLTDSPLDLAIQGKGYMPILLPSGETAYTRAGNF 120 Query: 121 QMDNQGRIVNAQGNLLQPTITIPQNASGLTINAQGQVSVTLPGQTASTNIGQIGLTRFIN 180 ++QG+IV G L+QP ITIPQNA+ +TI+ G V V L GQ +GQI L F+N Sbjct: 121 STNDQGQIVTEDGYLVQPGITIPQNATDITISKSGLVQVKLDGQPQPQTVGQIQLANFLN 180 Query: 181 KAGLMPIGDNLFVETPASGQPQDGTANTDGYGDMQQSNLEQANVEVVSEISDLIAAQRAY 240 + GL IGDNLF+ET ASG G+G + Q E +NV+ VSEI+ LI AQRAY Sbjct: 181 EGGLEAIGDNLFLETAASGAATLAAPGEPGFGMLLQHYTEASNVDAVSEITALITAQRAY 240 Query: 241 EMNSKVVSAADQMMQSTSNL 260 EMNSKV+S ADQM+Q+TS L Sbjct: 241 EMNSKVISTADQMLQATSQL 260 >TM1542 [N] COG4786 Flagellar basal body rod protein Tma Thermotoga maritima Length = 261 Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 129/262 (49%), Positives = 182/262 (69%), Gaps = 2/262 (0%) Query: 1 MRALYTAATGMAAQELSVQVISNNIANLRTTGYKKQRAAFQDLIYDHVRRVGAQASDQNT 60 M +LY+AATGM+AQ+ + I+NN+AN+ TTGYKK RA FQDL+Y +V+ G + ++ Sbjct: 2 MISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQDLLYQYVKNAGTPTAATSS 61 Query: 61 IMPMGIDLGGGVKTVGTPRMMTQGTLSPTGNDLDIAIRGEGFFKILMPDGTFTYTRDGSF 120 +P G+ +G GV+T T R+ T G TGN LD+AI G+GFF+I + DG YTRDGSF Sbjct: 62 -LPTGLYVGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQLQDGRIAYTRDGSF 120 Query: 121 QMDNQGRIVNAQGNLLQPTITIPQNASGLTINAQGQVSVTLPGQTASTNIGQIGLTRFIN 180 +MD++GRIV + G LL P ITIP+NA + ++ G VS L T +G I L RF+N Sbjct: 121 KMDSEGRIVTSNGLLLVPEITIPENAVSINVSPDGIVSAELQDGTIQ-ELGTITLVRFVN 179 Query: 181 KAGLMPIGDNLFVETPASGQPQDGTANTDGYGDMQQSNLEQANVEVVSEISDLIAAQRAY 240 +GL IGDNL++ TPASG P +G DG+G ++Q LE++NV+VV E+ D+I AQRAY Sbjct: 180 PSGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVDMITAQRAY 239 Query: 241 EMNSKVVSAADQMMQSTSNLFR 262 E NS+V+ AD+M+++ +N+ R Sbjct: 240 EFNSRVIQTADEMLRTATNVKR 261 >STM1179 [N] COG4786 Flagellar basal body rod protein Sty Salmonella typhimurium LT2 Length = 260 Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 127/260 (48%), Positives = 181/260 (69%), Gaps = 1/260 (0%) Query: 1 MRALYTAATGMAAQELSVQVISNNIANLRTTGYKKQRAAFQDLIYDHVRRVGAQASDQNT 60 + +L+ A TG+ AQ+ ++ VI+NN+AN+ T G+K+QRA F+DL+Y +R+ GAQ+S+Q T Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTT 61 Query: 61 IMPMGIDLGGGVKTVGTPRMMTQGTLSPTGNDLDIAIRGEGFFKILMPDGTFTYTRDGSF 120 +P G+ +G GV+ V T R+ +QG LS T N D+AI+G+GFF++++PDGT YTRDGSF Sbjct: 62 -LPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGTSAYTRDGSF 120 Query: 121 QMDNQGRIVNAQGNLLQPTITIPQNASGLTINAQGQVSVTLPGQTASTNIGQIGLTRFIN 180 Q+D G++V A G +QP ITIP NA +TI G VSVT GQ A +GQ+ LT F+N Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 181 KAGLMPIGDNLFVETPASGQPQDGTANTDGYGDMQQSNLEQANVEVVSEISDLIAAQRAY 240 GL IG+NL++ET +SG P + T +G G + Q +E +NV V E+ ++I QRAY Sbjct: 181 DTGLESIGENLYIETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 241 EMNSKVVSAADQMMQSTSNL 260 E+NSK VS DQM+Q + L Sbjct: 241 EINSKAVSTTDQMLQKLTQL 260 >RSp0347 [N] COG4786 Flagellar basal body rod protein Rso Ralstonia solanacearum Length = 260 Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 127/260 (48%), Positives = 177/260 (68%), Gaps = 1/260 (0%) Query: 1 MRALYTAATGMAAQELSVQVISNNIANLRTTGYKKQRAAFQDLIYDHVRRVGAQASDQNT 60 +R+L+ + TGM AQ+ + VISNN+AN+ TTG+K+ RA F+DL+Y +VR GAQ+S Q T Sbjct: 2 IRSLWISKTGMDAQQSQLDVISNNLANVNTTGFKRSRAVFEDLLYQNVREPGAQSSQQ-T 60 Query: 61 IMPMGIDLGGGVKTVGTPRMMTQGTLSPTGNDLDIAIRGEGFFKILMPDGTFTYTRDGSF 120 +P G+ +G G + V T R+ TQG L TGN D+AI G GFF++ MPDGT YTRDGSF Sbjct: 61 TLPSGMQIGTGTRIVATERLHTQGNLQQTGNSTDVAINGNGFFQVQMPDGTLAYTRDGSF 120 Query: 121 QMDNQGRIVNAQGNLLQPTITIPQNASGLTINAQGQVSVTLPGQTASTNIGQIGLTRFIN 180 Q++ QG++V + G +QP IT+PQNA+ LT+ G V+VT PG ST +G L FIN Sbjct: 121 QINAQGQLVTSSGYPVQPAITVPQNATSLTVAKDGTVTVTTPGAVNSTQVGTFQLANFIN 180 Query: 181 KAGLMPIGDNLFVETPASGQPQDGTANTDGYGDMQQSNLEQANVEVVSEISDLIAAQRAY 240 AGL +G+NL+ ET ASG ++G G + Q+ +E +NV VV E+ ++I QRAY Sbjct: 181 PAGLRSMGENLYAETEASGTANLAAPGSNGIGVLNQNYVETSNVNVVEEMVNMIQTQRAY 240 Query: 241 EMNSKVVSAADQMMQSTSNL 260 E+NSK V +DQM++ + L Sbjct: 241 EINSKAVQTSDQMLEKLAQL 260 >flgG [N] COG4786 Flagellar basal body rod protein Eco Escherichia coli K12 Length = 260 Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 126/260 (48%), Positives = 180/260 (69%), Gaps = 1/260 (0%) Query: 1 MRALYTAATGMAAQELSVQVISNNIANLRTTGYKKQRAAFQDLIYDHVRRVGAQASDQNT 60 + +L+ A TG+ AQ+ ++ VI+NN+AN+ T G+K+QRA F+DL+Y +R+ GAQ+S+Q T Sbjct: 2 ISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTT 61 Query: 61 IMPMGIDLGGGVKTVGTPRMMTQGTLSPTGNDLDIAIRGEGFFKILMPDGTFTYTRDGSF 120 +P G+ +G GV+ V T R+ +QG LS T N D+AI+G+GFF++++PDG+ YTRDGSF Sbjct: 62 -LPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSF 120 Query: 121 QMDNQGRIVNAQGNLLQPTITIPQNASGLTINAQGQVSVTLPGQTASTNIGQIGLTRFIN 180 Q+D G++V A G +QP ITIP NA +TI G VSVT GQ A +GQ+ LT F+N Sbjct: 121 QVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQGQAAPVQVGQLNLTTFMN 180 Query: 181 KAGLMPIGDNLFVETPASGQPQDGTANTDGYGDMQQSNLEQANVEVVSEISDLIAAQRAY 240 GL IG+NL+ ET +SG P + T +G G + Q +E +NV V E+ ++I QRAY Sbjct: 181 DTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240 Query: 241 EMNSKVVSAADQMMQSTSNL 260 E+NSK VS DQM+Q + L Sbjct: 241 EINSKAVSTTDQMLQKLTQL 260