BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0182.0031.p (263 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll0142 [T] COG0589 Universal stress protein UspA and related nu... 96 1e-19 RSc0185 [T] COG0589 Universal stress protein UspA and related nu... 95 2e-19 SMa1158 [T] COG0589 Universal stress protein UspA and related nu... 93 5e-19 AGc3179 [T] COG0589 Universal stress protein UspA and related nu... 85 1e-16 SMa1149 [T] COG0589 Universal stress protein UspA and related nu... 80 5e-15 >mll0142 [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins Mlo Mesorhizobium loti Length = 277 Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 68/245 (27%), Positives = 120/245 (48%), Gaps = 5/245 (2%) Query: 21 VVAIGYERTIIPLAALSGVAVTSVFEIEQARALERAEAALRVFDLRARSSGISYASRALS 80 ++ I E +P + +G T ++ + ERA+ VF R SG+S+ R+L Sbjct: 34 LIGIHAEALPVPYTSATGFPDTEFLQVSADMSRERADKLQAVFLRRIEDSGLSFEWRSLE 93 Query: 81 AVPAEARRSICASARVHDMTIVTQPQSGYESYDNVIPKDVLLQAGKPVLYLPSVIHGSFS 140 + ++ + +S R D+ I Q ++G + +V ++ AG+PVL +PS + Sbjct: 94 SFSGDSALTGISSVRAADLIIAAQRETGGDPSADV--DTLVYDAGRPVLVVPSAGPLVTT 151 Query: 141 ARRIGICWDGSRLAARALHDAMPLLREADALTIIAMT--DAHKVPAESSADHLGRYLERS 198 +R+ + W+GS+ AARA DA+P + EA+ I+ + D E++ + L R Sbjct: 152 FKRVLLAWNGSKEAARAAFDALPFIIEAEKTDILVIDPPDTFDESPEAAGAEIASALSRH 211 Query: 199 GLPAKI-VSLPAPQSVHRALLSLVADESLDLLVMGGYVRSRLQERLLGGISGNLLRANVI 257 G + V SV + + VA+ DLLV+G Y S L++ L GG++ +LR + Sbjct: 212 GANVSVSVQKSGGTSVDDMIQNRVAETGADLLVLGAYSHSWLRQLLFGGVTRTVLRTAQV 271 Query: 258 PVLMS 262 +S Sbjct: 272 AAFLS 276 >RSc0185 [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins Rso Ralstonia solanacearum Length = 279 Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 12/183 (6%) Query: 90 ICASARVHDMTIVTQ-----PQSGYESYDNVIPKDVLLQAGKPVLYLPSVIHGSFSARRI 144 + AR D+ IV Q P+S + + D V + ++L+AG+PVL +P + A+R+ Sbjct: 100 VLREAREADLLIVGQRDPDDPES-FVAADFV--ETLILEAGRPVLVVPYAGRFTTVAQRL 156 Query: 145 GICWDGSRLAARALHDAMPLLREADALTIIAMTD-AHKVPAESSADHLGRYLERSGLPAK 203 + W+G R +ARALHDA+PL++EA + + D H+ E++ + R L G+ + Sbjct: 157 LVAWNGGRESARALHDAVPLMQEATVYVLQMIDDHPHQRAEETTISQVARALLTYGIDST 216 Query: 204 IVS---LPAPQSVHRALLSLVADESLDLLVMGGYVRSRLQERLLGGISGNLLRANVIPVL 260 + + + ++ LLS AD + DL+V G Y SRL+E +LGG++ LL +PVL Sbjct: 217 VEEAHCVGSDVAIGEMLLSRAADFNADLIVTGAYGHSRLRELVLGGVTRTLLNTMTVPVL 276 Query: 261 MSH 263 MSH Sbjct: 277 MSH 279 >SMa1158 [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins Sme Sinorhizobium meliloti Length = 304 Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 102/171 (59%), Gaps = 3/171 (1%) Query: 94 ARVHDMTIVTQPQSGYESYDNVIPKDVLLQAGKPVLYLPSVIHGSFSARRIGICWDGSRL 153 AR+HD+TIV +S + D + + +L+++G+P+L +P+ F A+RI + WDGS Sbjct: 136 ARLHDLTIV-DAESESLAIDRGLIEALLMESGRPLLVVPAT-QDVFRAKRIILAWDGSGR 193 Query: 154 AARALHDAMPLLREADALTIIAMTDAHKVPAESSADHLGRYLERSGLPAKIVSLPAPQS- 212 AAR+ DA+P LR A+A+ ++A++ +PA + +L R G+ K +LP Sbjct: 194 AARSAADALPFLRAAEAVEVVAVSGEKDLPATPTCSDAALHLSRHGVHVKAQTLPVLNGD 253 Query: 213 VHRALLSLVADESLDLLVMGGYVRSRLQERLLGGISGNLLRANVIPVLMSH 263 V L DL+VMGGYV SRL+E + GG++ +LL+ + +P+ M++ Sbjct: 254 VAETLRKHAMLIHADLIVMGGYVHSRLRELVFGGVTQSLLKQSPVPLFMAY 304 >AGc3179 [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 281 Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 10/208 (4%) Query: 62 VFDLRARSSGISYASRALSAVPAEARRSICASARVHDMTIVTQPQSGYESYDNVIPKDVL 121 +F+ ++GIS+ R+ A S SAR D+ + Q S S L Sbjct: 76 LFERTLSTNGISHEWRSFVTSVGYASASAIDSARCADLIVARQSSSSALSDSRSDIDGFL 135 Query: 122 LQAGKPVLYLPSVIHGSFSARRIGICWDGSRLAARALHDAMPLLREADALTIIAM--TDA 179 ++G+PVL +P V+ + +R+ I W+GSR A RA DA+P L+ AD++ I ++ +++ Sbjct: 136 YESGRPVLLVPHVLTVAKPIKRVLIAWNGSREATRATFDALPFLKAADSVEIFSVDQSES 195 Query: 180 HKVPAESSADHLGRYLERSGLPAKIVSLP-----APQSVHRALLSLVADESLDLLVMGGY 234 A + L L R G+ + S +PQ+ A+ + ++D S+DLLVMG Y Sbjct: 196 ETQSAGLAGAELAATLARHGVNVTVTSQEKIAGLSPQA---AIENRLSDNSIDLLVMGAY 252 Query: 235 VRSRLQERLLGGISGNLLRANVIPVLMS 262 SR E L GG++ LL + L+S Sbjct: 253 GHSRWWELLFGGVTRTLLDSMTAMTLLS 280 >SMa1149 [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins Sme Sinorhizobium meliloti Length = 277 Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 15/225 (6%) Query: 48 EQARALERAEAALRVFDLRARSS----GISYASRALSAVPAEARRSICASARVHDMTIVT 103 E+A ++ + A+R RAR++ GIS+ + + A A + + AR D+T++ Sbjct: 59 ERAEDMKHLDDAVR----RARATLKDLGISFDANGIYCETAWADDDVGSRARYADVTLIG 114 Query: 104 QPQSGYESYDNVIPKDVLLQAGKPVLYLPSVIHGSFSARRIGICWDGSRLAARALHDAMP 163 S N L + +PVL S + ++I + W+ + +ARA +AM Sbjct: 115 ASLQTDPSLRNRAIDGALFYSARPVLLATSRQSVTLRPKKILLAWNSTIESARAAREAME 174 Query: 164 LLREADALTIIAMTDAHKVPA----ESSADHLGRYLERSGLPAKIVSLP-APQSVHRALL 218 L+ A+ + ++ + D PA E AD + YL R + + LP A + V L Sbjct: 175 LMESAEEVNVV-LVDPSAAPARNGEEPGAD-IATYLARHVVNVTVDRLPSAGRRVEEVLN 232 Query: 219 SLVADESLDLLVMGGYVRSRLQERLLGGISGNLLRANVIPVLMSH 263 D S DL+VMG Y +RL+ER+ GG++ ++ ++PVLM H Sbjct: 233 QHAIDTSADLIVMGAYGHTRLRERIFGGVTKAMIERPIVPVLMVH 277