BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0182.0002.p         (429 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO4021 [I] COG0439 Biotin carboxylase Ype Yersinia pestis            217   4e-56

>YPO4021 [I] COG0439 Biotin carboxylase Ype Yersinia pestis
          Length = 414

 Score =  217 bits (553), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/426 (32%), Positives = 218/426 (51%), Gaps = 18/426 (4%)

Query: 4   RNCVIVDAYSTGRFLPEEFKRYGISTVHVMSAAQIPSIFQSHFNANLYDEVIRPPERMG- 62
           +  ++VD +S+G+F+     + G   +H+ S   + S + + F     DE I   +R+  
Sbjct: 2   KKIIVVDGFSSGKFVAMTLYKMGCELIHIASRCDLDSYYYAGF-----DETIYRQQRINK 56

Query: 63  -YDEIVEYHLRALQGREL--EFVIAGCETGVELADSISERLGLP-SNGTALSAARRDKSR 118
             D+ +E+       R+L  + VIAG E+GV LAD ++  LGL   N    S+ARR+K  
Sbjct: 57  HIDDTIEF------ARQLGADAVIAGAESGVLLADRLNHELGLCYRNAFVTSSARRNKYE 110

Query: 119 LSEALASAGVRSIRQVVSDNAEVIARWKRQETFDELVIKPLNSTGTEDVFFCSTDADIQR 178
           +   LA+AG+ + RQ+ + + E  + W        +V+KPL S G++ VF C        
Sbjct: 111 MINTLANAGLSAARQIDTADWEDASAWLDVHATWPVVLKPLESAGSDGVFICQDKQSAYH 170

Query: 179 AVTAIVGKTNRVGTLNQLALGQEKINGQQYTVNAVSIDGETFVTEAWTYDTVPIEGASSV 238
           A  AI+G  N++  +N+  L QE ++G +Y VN VS+DGE  VTE   Y    +   S +
Sbjct: 171 AFLAILGTANKLSLVNESVLLQEFLDGTEYVVNFVSLDGEPLVTEIVRYHKRRLPSGSVI 230

Query: 239 CSLERLLGGKEPIVLELSDYLERALRALRITDGPAHAEIIVDDRGPVLVDFGARLQGTMS 298
             ++ LL    P    L DY ++A   L I +GP+HAE+++   GPVLV+  AR  G + 
Sbjct: 231 YDIDELLDCTSPEYQPLVDYTKQAALVLGIKNGPSHAEVMMTSGGPVLVEIAARTDGILH 290

Query: 299 AKARTMALGHNHLTLTAWRYADPKGFAGYMRRRGVYKRQAHALCVSLISDMGGVVAGYPG 358
                +  G   L   A   ADP  F   +++   Y+  AH+  V LI+   GV +    
Sbjct: 291 PDVAAVTTGFGQLVAFAQSLADPDRFRQTLKKES-YRLNAHSFNVCLINQAAGVFSAKHF 349

Query: 359 LDAIGKLPSFADAIAFVPIGQNLVPTIDLASTPGIVYLVNNDLIQLEEDYRQLRAMRMDQ 418
              + +LPS+  ++ +V  G N+  T ++ S PG VYLV+    QL +DY  +R M  D 
Sbjct: 350 ERELQRLPSYKKSVYYVNEGDNIKVTKNVFSQPGTVYLVHKSKEQLWQDYTSIRKMESDG 409

Query: 419 VFDLVP 424
            F L+P
Sbjct: 410 -FYLLP 414