BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0180.0007.p         (95 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEI1302 [M] COG0741 Soluble lytic murein transglycosylase and r...    92   3e-19
mll7744 [M] COG0741 Soluble lytic murein transglycosylase and re...    89   2e-18
AGc1881 [M] COG0741 Soluble lytic murein transglycosylase and re...    88   6e-18
SMc02403 [M] COG0741 Soluble lytic murein transglycosylase and r...    86   3e-17
RP400 [M] COG0741 Soluble lytic murein transglycosylase and rela...    78   4e-15

>BMEI1302 [M] COG0741 Soluble lytic murein transglycosylase and related
           regulatory proteins (some contain LysM/invasin domains)
           Bme Brucella melitensis
          Length = 685

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 51/70 (72%), Gaps = 1/70 (1%)

Query: 2   LSEYRNCHIMTFAGYNAGRGRVRDWIKAYGDPRDPKVDPV-DWVERIPISETRNYVQRVM 60
           L  +   +++TFAGYNAG  R  +W++ YGDPR   V+ V DW+ERIP SETRNYVQRVM
Sbjct: 601 LDRFNGSYVLTFAGYNAGPRRASEWVEKYGDPRGKSVEQVVDWIERIPYSETRNYVQRVM 660

Query: 61  ENFAVYQVRF 70
           EN+ VY+ R 
Sbjct: 661 ENYEVYKTRL 670


>mll7744 [M] COG0741 Soluble lytic murein transglycosylase and related
           regulatory proteins (some contain LysM/invasin domains)
           Mlo Mesorhizobium loti
          Length = 676

 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 1/71 (1%)

Query: 2   LSEYRNCHIMTFAGYNAGRGRVRDWIKAYGDPRDPKVDPV-DWVERIPISETRNYVQRVM 60
           L  +   +++TFAGYNAG  R   W+  YGDPR   +D V DW+ERIP +ETR+YVQRVM
Sbjct: 592 LDRFNGSYVLTFAGYNAGPNRASQWVAKYGDPRGKDIDAVVDWIERIPYTETRSYVQRVM 651

Query: 61  ENFAVYQVRFE 71
           EN+ VY++R  
Sbjct: 652 ENYEVYKMRIS 662


>AGc1881 [M] COG0741 Soluble lytic murein transglycosylase and related
           regulatory proteins (some contain LysM/invasin domains)
           Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 694

 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 2   LSEYRNCHIMTFAGYNAGRGRVRDWIKAYGDPRDPKVDPV-DWVERIPISETRNYVQRVM 60
           +  +   +I+TF  YNAG  RV +WI  YGDPR   +D V DW+ERIP  ETRNYVQRVM
Sbjct: 609 IDSFGGSYILTFVAYNAGPKRVPEWISRYGDPRGKPIDEVVDWIERIPFPETRNYVQRVM 668

Query: 61  ENFAVYQVRF 70
           EN+ VY+ R 
Sbjct: 669 ENYQVYKTRL 678


>SMc02403 [M] COG0741 Soluble lytic murein transglycosylase and related
           regulatory proteins (some contain LysM/invasin domains)
           Sme Sinorhizobium meliloti
          Length = 681

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)

Query: 2   LSEYRNCHIMTFAGYNAGRGRVRDWIKAYGDPRDPKVDPV-DWVERIPISETRNYVQRVM 60
           +  +   +I+TF  YNAG  RV DW+  YGDPR   +D V DW+ERIP  ETRNYVQRVM
Sbjct: 595 IDSFGGSYILTFIAYNAGPRRVPDWLARYGDPRGKPIDEVVDWIERIPFEETRNYVQRVM 654

Query: 61  ENFAVYQVRF-EDAD 74
           EN+ VY+ R  +D D
Sbjct: 655 ENYQVYKSRLGQDTD 669


>RP400 [M] COG0741 Soluble lytic murein transglycosylase and related
           regulatory proteins (some contain LysM/invasin domains)
           Rpr Rickettsia prowazekii
          Length = 651

 Score = 78.2 bits (191), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 2/70 (2%)

Query: 1   LLSEYRNCHIMTFAGYNAGRGRVRDWIKAYGDPRDPK--VDPVDWVERIPISETRNYVQR 58
           LL +++  ++++ A YNAG   V  WI+ +GDPRD K     +DW+E IP  ETRNYVQR
Sbjct: 560 LLDDHKGSYVLSIASYNAGSNNVMKWIEKFGDPRDIKDTRKIIDWIELIPYKETRNYVQR 619

Query: 59  VMENFAVYQV 68
           V+EN  +Y+V
Sbjct: 620 VLENVQIYRV 629