BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0177.0016.p         (99 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

lin0150 [S] COG1359 Uncharacterized conserved protein Lin Lister...    64   6e-11
SMc01833 [S] COG1359 Uncharacterized conserved protein Sme Sinor...    63   1e-10
BS_ycnE [S] COG1359 Uncharacterized conserved protein Bsu Bacill...    62   5e-10
NMA1764 [S] COG1359 Uncharacterized conserved protein NmA Neisse...    60   9e-10
NMB1575 [S] COG1359 Uncharacterized conserved protein Nme Neisse...    60   1e-09

>lin0150 [S] COG1359 Uncharacterized conserved protein Lin Listeria
          innocua
          Length = 96

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%)

Query: 1  VIYVVATLTIKPETRAEFIAAATACIKETRKEPGNIAYDLHESVTDHSKMVFVEQWENAD 60
          ++++ A +TIK E    F+ AA   I  ++ E GN  Y+L +S  + +    +E+W + D
Sbjct: 1  MLHIEAQMTIKKEQIEAFLQAAKEVIAASQAETGNHGYELVQSTENETVFYMLEKWADMD 60

Query: 61 ALVPHRTAEHMKTFGRVAVKCMAAPPKIEVITP 93
          A+  H  +EH K F   A   +A P +I V+TP
Sbjct: 61 AIQQHNESEHFKKFQNAATNFVAKPLEISVLTP 93


>SMc01833 [S] COG1359 Uncharacterized conserved protein Sme Sinorhizobium
          meliloti
          Length = 98

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 1  VIYVVATLTIKPETRAEFIAAATACIKETRKEPGNIAYDLHESVTDHSKMVFVEQWENAD 60
          ++Y++A LT       E +A  T  I+ T KE G ++Y+L+   TD   +VFVE W++  
Sbjct: 1  MVYIIAYLTAHAGKGDEVVALTTPLIEATLKEAGCVSYELYRKPTDPDALVFVETWKDRA 60

Query: 61 ALVPHRTAEHMKTFGRVAVKCMAAPPKIEVITPEKVDV 98
          A+  H    H+K F   A   +A+  ++E++ PEK++V
Sbjct: 61 AIDAHFAEPHLKAFQTAAANLLAS-ARVEIVHPEKIEV 97


>BS_ycnE [S] COG1359 Uncharacterized conserved protein Bsu Bacillus
          subtilis
          Length = 95

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%)

Query: 1  VIYVVATLTIKPETRAEFIAAATACIKETRKEPGNIAYDLHESVTDHSKMVFVEQWENAD 60
          +I + A + +KPE R EF++ A + ++ +R E GN  YDL E V + +  V +E+W++  
Sbjct: 1  MIVLQAYIKVKPEKREEFLSEAQSLVQHSRAEEGNAQYDLFEKVGEENTFVMLEKWKDEA 60

Query: 61 ALVPHRTAEHMKTFGRVAVKCMAAP 85
          A+  H    H + F     + ++AP
Sbjct: 61 AMKFHNETAHFQGFVAKGKELLSAP 85


>NMA1764 [S] COG1359 Uncharacterized conserved protein NmA Neisseria
          meningitidis Z2491
          Length = 97

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%)

Query: 2  IYVVATLTIKPETRAEFIAAATACIKETRKEPGNIAYDLHESVTDHSKMVFVEQWENADA 61
          I +VA +T+KPE      A     +K +R E GNI+YDLH+ +   ++ VFVE W++  A
Sbjct: 4  IKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYDLHQEIGKPNRFVFVENWKSQAA 63

Query: 62 LVPHRTAEHMKTF 74
          +  H  + H + F
Sbjct: 64 IDEHNASAHFQAF 76


>NMB1575 [S] COG1359 Uncharacterized conserved protein Nme Neisseria
          meningitidis MC58
          Length = 97

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%)

Query: 2  IYVVATLTIKPETRAEFIAAATACIKETRKEPGNIAYDLHESVTDHSKMVFVEQWENADA 61
          I +VA +T+KPE      A     +K +R E GNI+YDLH+ +   ++ VFVE W++  A
Sbjct: 4  IKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYDLHQEIGKPNRFVFVENWKSQAA 63

Query: 62 LVPHRTAEHMKTF 74
          +  H  + H + F
Sbjct: 64 IDEHNASAHFQAF 76