BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0177.0013.p (254 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI1650 [O] COG0830 Urease accessory protein UreF Bme Brucella ... 181 2e-45 AGc4350 [O] COG0830 Urease accessory protein UreF Atu Agrobacter... 179 4e-45 mll4936 [O] COG0830 Urease accessory protein UreF Mlo Mesorhizob... 165 7e-41 SMc01831 [O] COG0830 Urease accessory protein UreF Sme Sinorhizo... 151 1e-36 alr0734 [O] COG0830 Urease accessory protein UreF Nos Nostoc sp.... 111 2e-24 >BMEI1650 [O] COG0830 Urease accessory protein UreF Bme Brucella melitensis Length = 228 Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 112/229 (48%), Positives = 145/229 (63%), Gaps = 7/229 (3%) Query: 26 MAEDEAAALYRLMTWLSPSFPVGAFAYSSGIEWAVEAGDITDAASLRDWLAAMLSDGSGF 85 + D AL RLM WLSP FPVG+F+YS G+E AV G + DAA L+DWL ++ GSG+ Sbjct: 7 ITNDPTTALLRLMAWLSPVFPVGSFSYSHGLERAVHDGLVVDAAGLQDWLQWLVRRGSGW 66 Query: 86 CDAVFLAQSFRAALQPNHAGLKEIAELAAAFVPSRERRLETTTQGRAFIEIAGAAWNSPG 145 DAV A+S+R ++ L EIAELA A SRER +ET QG AF+ A +W Sbjct: 67 NDAVLCAESWRCTMKGED--LHEIAELAEALAGSRERHMETMLQGGAFLA-AARSWPCEI 123 Query: 146 LDAMIAACDGPIVYPVAVGLVSAAHGIRLAPALHAFLHAVLSNWISAGSRLIPLGQTDSQ 205 D + C YPVAVG V+ HG+ LA AL AFL A N + A RL GQ+ Sbjct: 124 FDRLPPDC----AYPVAVGAVAGGHGVPLAQALAAFLQAFCINLLQASIRLSVTGQSGVT 179 Query: 206 RVLADLEPVVAATAARAGAASLDDLGSATFRADLASLRHETQYTRLFRS 254 ++A LEPV+ TAARA +S++DLGSATF AD+ +++HETQ++RLFRS Sbjct: 180 AIMAALEPVLGETAARAALSSMEDLGSATFIADIMAMKHETQHSRLFRS 228 >AGc4350 [O] COG0830 Urease accessory protein UreF Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 223 Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 114/228 (50%), Positives = 141/228 (61%), Gaps = 7/228 (3%) Query: 27 AEDEAAALYRLMTWLSPSFPVGAFAYSSGIEWAVEAGDITDAASLRDWLAAMLSDGSGFC 86 AE AAL RLM WLSP+FPVG F+YS G+E AVE G + DAA L W+ +L GS + Sbjct: 3 AESGVAALLRLMAWLSPAFPVGGFSYSGGLEKAVEDGRVCDAAGLGGWVETLLRHGSLWN 62 Query: 87 DAVFLAQSFRAALQPNHAGLKEIAELAAAFVPSRERRLETTTQGRAFIEIAGAAWNSPGL 146 DAVFLA ++R++ + L E A L A S ER ET G AFI A +AW L Sbjct: 63 DAVFLAHAWRSS--QDTTALSETANLGRALAGSAERYRETVLLGDAFIA-AASAWPHAVL 119 Query: 147 DAMIAACDGPIVYPVAVGLVSAAHGIRLAPALHAFLHAVLSNWISAGSRLIPLGQTDSQR 206 + + + P YPVA+G V+A HG+ L L AFLHA +S +SAG RL GQ D Sbjct: 120 ELL--PKEAP--YPVAIGAVAAGHGVPLRETLAAFLHAGVSQIVSAGIRLGVAGQKDGVA 175 Query: 207 VLADLEPVVAATAARAGAASLDDLGSATFRADLASLRHETQYTRLFRS 254 +LA E V+ AARA ++LDDLGSAT AD A++RHETQ TRLFRS Sbjct: 176 ILAASEAVIEEIAARAALSTLDDLGSATVIADTAAMRHETQGTRLFRS 223 >mll4936 [O] COG0830 Urease accessory protein UreF Mlo Mesorhizobium loti Length = 223 Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 107/222 (48%), Positives = 140/222 (63%), Gaps = 7/222 (3%) Query: 33 ALYRLMTWLSPSFPVGAFAYSSGIEWAVEAGDITDAASLRDWLAAMLSDGSGFCDAVFLA 92 AL RLM WLSP+FPVG FAYS G+E AV G + DA SL +WL ++ GSG+ DAV Sbjct: 9 ALLRLMAWLSPAFPVGGFAYSHGLECAVHDGLVADATSLANWLETLVKMGSGWNDAVLFC 68 Query: 93 QSFRAALQPNHAGLKEIAELAAAFVPSRERRLETTTQGRAFIEIAGAAWNSPGLDAMIAA 152 +S+R A N L E+A LA A SRER ET QG AF++ A AAW +P L + A Sbjct: 69 ESWRRA--RNAGDLDEVAALAEALAGSRERHAETMLQGAAFLKAA-AAWPNPVLARLPAE 125 Query: 153 CDGPIVYPVAVGLVSAAHGIRLAPALHAFLHAVLSNWISAGSRLIPLGQTDSQRVLADLE 212 C Y V VG ++ +GI L AL AFL A SN + A RL +GQ+++ +LA E Sbjct: 126 C----AYCVTVGAIAGGNGIALQDALSAFLQAFFSNLVQAAIRLGVVGQSEATTLLAGFE 181 Query: 213 PVVAATAARAGAASLDDLGSATFRADLASLRHETQYTRLFRS 254 P+ +TA RA ++LDDLG F +D+ +++HETQY+RLFRS Sbjct: 182 PLALSTADRASRSTLDDLGGCAFVSDVVAMKHETQYSRLFRS 223 >SMc01831 [O] COG0830 Urease accessory protein UreF Sme Sinorhizobium meliloti Length = 223 Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 105/234 (44%), Positives = 137/234 (58%), Gaps = 16/234 (6%) Query: 26 MAED-EAAALYRLMTWLSPSFPVGAFAYSSGIEWAVEAGDITDAASLRDWLAAMLSDGSG 84 MAE + +L RL+TWLSP+FPVG+F+YS G+E A+ +T A LR W +L G+ Sbjct: 1 MAEHADTQSLLRLVTWLSPAFPVGSFSYSGGLEQAIHDRLVTGADDLRLWCETLLDHGTT 60 Query: 85 FCDAVFLAQSFRAALQPNHAGLKEIAELAAAFVPSRERRLETTTQGRAFIEIAG----AA 140 + DA+ LA+ +RA + A L +ELA A SRE +ET G AF+ AG A+ Sbjct: 61 WNDALLLAEGYRAC--DDAARLIAASELAEALAGSREWHMETMLLGEAFLAAAGHWPHAS 118 Query: 141 WNSPGLDAMIAACDGPIVYPVAVGLVSAAHGIRLAPALHAFLHAVLSNWISAGSRLIPLG 200 PG A YPVAVG V+ AH L AL AFL+A +SN +S R G Sbjct: 119 LEFPGARA---------AYPVAVGAVAGAHRTGLEAALAAFLNATISNAVSVAIRCGVTG 169 Query: 201 QTDSQRVLADLEPVVAATAARAGAASLDDLGSATFRADLASLRHETQYTRLFRS 254 Q D +LA +E + A A RA ASLDDLG+AT AD+ASLRHE ++RLFR+ Sbjct: 170 QRDGVGMLARMEKTIGAVATRATRASLDDLGAATIIADIASLRHEILHSRLFRT 223 >alr0734 [O] COG0830 Urease accessory protein UreF Nos Nostoc sp. PCC 7120 Length = 206 Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 117/208 (56%), Gaps = 2/208 (0%) Query: 47 VGAFAYSSGIEWAVEAGDITDAASLRDWLAAMLSDGSGFCDAVFLAQSFRAALQPNHAGL 106 +GA++YS G+E VE G IT ++L+ WL A LS G+ +A + ++++AA + L Sbjct: 1 MGAYSYSEGLETLVENGTITSQSTLQQWLEAELSYGAIRLEAAVMVRAYQAATMDDMETL 60 Query: 107 KEIAELAAAFVPSRERRLETTTQGRAFIEIAGAAWNSPGLDAMIAACDGPIVYPVAVGLV 166 +A ++E R + GR+ +++ G P + + A P Y +A G+ Sbjct: 61 CYWNLWLSAARETQELRNSSWQMGRSLMQLLGKI--QPEILPLANAVGNPCNYAIAFGIA 118 Query: 167 SAAHGIRLAPALHAFLHAVLSNWISAGSRLIPLGQTDSQRVLADLEPVVAATAARAGAAS 226 SA I + AL A+LH+ +N I+AG +LIPLGQT Q +L L+P+++ + Sbjct: 119 SAHWQINIQAALLAYLHSWATNLITAGVKLIPLGQTAGQELLLQLQPLISHATVEIMSLK 178 Query: 227 LDDLGSATFRADLASLRHETQYTRLFRS 254 D+L ++ LAS++HETQYTRLFRS Sbjct: 179 DDELSCCSWGLSLASMQHETQYTRLFRS 206