BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0175.0007.p (463 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEI0232 [R] COG2270 Permeases of the major facilitator superfam... 403 e-112 mll4103 [R] COG2270 Permeases of the major facilitator superfami... 392 e-108 SMc04087 [R] COG2270 Permeases of the major facilitator superfam... 371 e-102 AGc5017 [R] COG2270 Permeases of the major facilitator superfami... 333 5e-91 CC2954 Non COG 208 2e-53 >BMEI0232 [R] COG2270 Permeases of the major facilitator superfamily Bme Brucella melitensis Length = 481 Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust. Identities = 216/453 (47%), Positives = 286/453 (63%), Gaps = 3/453 (0%) Query: 6 QTGAGDAKATTKDYPGRAAVISWIFFDWAAQPYFTLITTFVFAPYFASFVAPDAASGQAL 65 + G + + + R V WIFFDWAAQP+FT++TTF+F PYF S VA GQ Sbjct: 19 EQGLTEQVMAPRRHAARRGVWGWIFFDWAAQPFFTVVTTFIFGPYFISHVAATPEEGQMA 78 Query: 66 WGFATAAAGLAIALLSPVLGAIADASGRRKPWIAGFGALLVIGSSAMWIGKPGNPDIIPM 125 WG+ A AGL IA+LSP+LG++AD +G RKPWI F L +I S +W PG + Sbjct: 79 WGYGFAVAGLLIAILSPILGSVADKTGARKPWIGFFAVLKIICLSLLWFAVPGAN--LFW 136 Query: 126 LLLAYAIASVGVEFATVFNNAMMPTLVPPDRIGRLSGTGWATGYVGGILSLVLVLGFLAA 185 +L A+AIA V EF+ VFN++MMP LV + IGR+S W GY+GG++ L+ V+ LAA Sbjct: 137 VLCAFAIAMVAAEFSIVFNDSMMPRLVAREDIGRVSNIAWGLGYLGGMIVLIFVVFCLAA 196 Query: 186 NAETGRTLFGFTPLFGLDPVMHEGDRITGPLTGLWFIIFVTPMFLFTPDYPAKRPLREAL 245 + ETGRT+ G PLFGLDP + EG RITGPL LW+ IF+ PMF FTPD PLR AL Sbjct: 197 SPETGRTIIGMKPLFGLDPQLGEGARITGPLAALWYFIFILPMFFFTPDAAKGEPLRTAL 256 Query: 246 GEGLRELRESLSSLPRQKSLARFLLANMIYTDGLVSLFAFGGIYAAGTFGWDTIRIGTFG 305 GL EL+ +L+ + + + RFL A MIY DG+ +L A GG YAA F W IG FG Sbjct: 257 RSGLSELKATLAEVRHRSGIVRFLAARMIYQDGVNALLALGGGYAAAMFHWTITEIGLFG 316 Query: 306 IILAVAGTFGGWIGGKLDDAFGPKRVITGSLVILLFAIVVILTVNKDSILFIPVAPPVPG 365 +IL V I +LD FG K+V+ G+LV+L FA + I++ +D LF + + G Sbjct: 317 MILNVMAIISCLIASRLDMRFGSKKVVIGALVLLFFASLGIISTARDYTLFGLLPFTLEG 376 Query: 366 -GALFAGAAERAYIVLGCLIGATGAPLQAASRSLLIRLAPKDRIAQYFGLFALTGKVTSF 424 G LF AAE +Y++ G +IGA P+QA+SRS R + +YFGL+AL G+ TSF Sbjct: 377 EGKLFGTAAEHSYLIYGLMIGAAFGPVQASSRSWFARSIKPEESGRYFGLYALAGRATSF 436 Query: 425 IGPLLIGAITAATASQKAGMAVLVAFFVAGLAL 457 +GP L+ +ITA + S GM+VL+ FFVAG AL Sbjct: 437 MGPFLVASITAISGSAALGMSVLLLFFVAGFAL 469 >mll4103 [R] COG2270 Permeases of the major facilitator superfamily Mlo Mesorhizobium loti Length = 458 Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust. Identities = 205/434 (47%), Positives = 286/434 (65%), Gaps = 3/434 (0%) Query: 28 WIFFDWAAQPYFTLITTFVFAPYFASFVAPDAASGQALWGFATAAAGLAIALLSPVLGAI 87 W+FFDWAAQP+FT++TTF+F PYF S +A D +GQA+WG+ AAAGL IA+LSP+LG+I Sbjct: 17 WMFFDWAAQPFFTVVTTFIFGPYFVSRMAGDPNTGQAVWGYGIAAAGLVIAVLSPILGSI 76 Query: 88 ADASGRRKPWIAGFGALLVIGSSAMWIGKPGNPDIIPMLLLAYAIASVGVEFATVFNNAM 147 AD +G RKPWIA F A+ + + +W PG+ + + L +++ASV EF+TVFN++M Sbjct: 77 ADQTGPRKPWIAFFAAIKITSLALLWFAAPGSNLFLVVAL--FSLASVAAEFSTVFNDSM 134 Query: 148 MPTLVPPDRIGRLSGTGWATGYVGGILSLVLVLGFLAANAETGRTLFGFTPLFGLDPVMH 207 MP LVP IGR+S T W GY+GG+++L+ V+ LA + ETG+T+ G PLFGLDP + Sbjct: 135 MPRLVPKSEIGRISNTAWGLGYLGGMIALIFVVTCLAGSPETGKTIIGIDPLFGLDPKLG 194 Query: 208 EGDRITGPLTGLWFIIFVTPMFLFTPDYPAKRPLREALGEGLRELRESLSSLPRQKSLAR 267 E R TGPL+ W+ +F+ PMF FTPD P+ A+ EGL EL+ +L+ + R+ + R Sbjct: 195 EDARATGPLSAGWYFLFILPMFFFTPDAIKGIPIGPAVREGLLELKSTLAEVRRRGGIFR 254 Query: 268 FLLANMIYTDGLVSLFAFGGIYAAGTFGWDTIRIGTFGIILAVAGTFGGWIGGKLDDAFG 327 FL+A MIY DG+ +L A GG +AAG F W IG FGIIL V FG WI +LD A G Sbjct: 255 FLVARMIYQDGVNALLALGGTFAAGMFHWSITEIGMFGIILNVVAIFGCWIAARLDTALG 314 Query: 328 PKRVITGSLVILLFAIVVILTVNKD-SILFIPVAPPVPGGALFAGAAERAYIVLGCLIGA 386 K V+ +LV+L A + I++ ++L + P G LF AAE+AYI+ G LIG Sbjct: 315 SKAVVMIALVMLSIATIGIISTGPGFTLLGLIQLPTTDSGGLFGTAAEKAYILYGLLIGL 374 Query: 387 TGAPLQAASRSLLIRLAPKDRIAQYFGLFALTGKVTSFIGPLLIGAITAATASQKAGMAV 446 P+QA+SRS + R +YFG++AL G+ TSF+ P L+ ITA + S + GMAV Sbjct: 375 AFGPVQASSRSYMARSVTAAESGRYFGIYALAGRATSFLAPFLVATITALSDSARLGMAV 434 Query: 447 LVAFFVAGLALLAK 460 ++ F G+A+L + Sbjct: 435 IILFLGIGMAILVR 448 >SMc04087 [R] COG2270 Permeases of the major facilitator superfamily Sme Sinorhizobium meliloti Length = 463 Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust. Identities = 206/459 (44%), Positives = 281/459 (61%), Gaps = 8/459 (1%) Query: 5 MQTGAGDAKATTKDYPGRAAVISWIFFDWAAQPYFTLITTFVFAPYFASFVAPDAASGQA 64 M AG + + R + W+ FDWAAQP+FT+ITTF+FAPYF S + D A GQA Sbjct: 1 MDIAAG--RMEERPRTSRLGIAGWMLFDWAAQPFFTVITTFIFAPYFVSRLTADPAHGQA 58 Query: 65 LWGFATAAAGLAIALLSPVLGAIADASGRRKPWIAGFGALLVIGSSAMWIGKPGNPDIIP 124 +WG+ AG+ IALLSPVLGAIADASG RKPWIA F A+ +I + +W PG+ I Sbjct: 59 VWGYTLTVAGIVIALLSPVLGAIADASGPRKPWIAFFAAVKIISLALLWNAAPGSSLI-- 116 Query: 125 MLLLAYAIASVGVEFATVFNNAMMPTLVPPDRIGRLSGTGWATGYVGGILSLVLVLGFLA 184 L A+A+V EF+ VFN++MM LV +GR+S W GY+GG++ L+ V+ +A Sbjct: 117 YTALLLALATVAAEFSIVFNDSMMTRLVSEKEVGRISNIAWGLGYLGGMIVLIAVVALIA 176 Query: 185 ANAETGRTLFGFTPLFGLDPVMHEGDRITGPLTGLWFIIFVTPMFLFTPDYP-AKRPLRE 243 + +TG+T G PLFGLDP E RITGP++ W+++F+ PMFLFTPD A+ + + Sbjct: 177 GSPQTGKTAIGLEPLFGLDPAKGEDARITGPISAAWYLVFILPMFLFTPDATRARMSMAK 236 Query: 244 ALGEGLRELRESLSSLPRQKSLARFLLANMIYTDGLVSLFAFGGIYAAGTFGWDTIRIGT 303 A G EL+ +L+ L + + RFL+A MI+ DG+ L A GG +AAG FGW T+ +G Sbjct: 237 ATARGFEELKGTLAELKERAGILRFLIARMIFQDGVNGLLALGGTFAAGMFGWQTMELGL 296 Query: 304 FGIILAVAGTFGGWIGGKLDDAFGPKRVITGSLVILLFAIVVILTVNKDSILF--IPVAP 361 +GIIL V FG +LD G K ++ SLV L A + I++ LF +P+ Sbjct: 297 YGIILNVVAIFGCLYASRLDARLGSKTIVVASLVSLTIATLGIVSTGPGFTLFGLVPLGS 356 Query: 362 PVPGGALFAGAAERAYIVLGCLIGATGAPLQAASRSLLIRLAPKDRIAQYFGLFALTGKV 421 GG LF AAE+AYI+ G L+G P+QA+SRS L R D +YFGL+AL+G+ Sbjct: 357 TDSGG-LFGTAAEKAYILYGLLVGVAFGPVQASSRSYLARSVSPDEAGRYFGLYALSGRA 415 Query: 422 TSFIGPLLIGAITAATASQKAGMAVLVAFFVAGLALLAK 460 TSF+ P + IT T S + GM LVAF GL +L + Sbjct: 416 TSFLAPASVATITLVTGSARIGMMALVAFLAVGLVILLR 454 >AGc5017 [R] COG2270 Permeases of the major facilitator superfamily Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 458 Score = 333 bits (854), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 190/437 (43%), Positives = 262/437 (59%), Gaps = 3/437 (0%) Query: 28 WIFFDWAAQPYFTLITTFVFAPYFASFVAPDAASGQALWGFATAAAGLAIALLSPVLGAI 87 W+ FDWAAQP+FT++TTF+F PYF + + D S QA W + + IAL SP+LG+I Sbjct: 20 WVMFDWAAQPFFTVVTTFIFGPYFVARLTDDPISAQATWSNMATVSSIIIALFSPILGSI 79 Query: 88 ADASGRRKPWIAGFGALLVIGSSAMWIGKPGNPDIIPMLLLAYAIASVGVEFATVFNNAM 147 AD SG RKPWIA F + ++ +W PG+P I+P++ + +AS+ EF+ VFN++M Sbjct: 80 ADQSGARKPWIAFFAVIKIVSLFFLWFAAPGSPIILPIICMI--LASIAAEFSIVFNDSM 137 Query: 148 MPTLVPPDRIGRLSGTGWATGYVGGILSLVLVLGFLAANAETGRTLFGFTPLFGLDPVMH 207 MP L P +GR+S W GY+GG++ L+ V+ LA+N +TG T+ G PLFGLDP Sbjct: 138 MPRLTNPQNVGRISNLAWGLGYLGGMVVLIAVVTLLASNPQTGLTIAGVKPLFGLDPATG 197 Query: 208 EGDRITGPLTGLWFIIFVTPMFLFTPDYPAKRPLREALGEGLRELRESLSSLPRQKSLAR 267 E RITGPL LW+++F+ PMFL T D P A+ GL EL+ +L L + L R Sbjct: 198 EDARITGPLAALWYLVFILPMFLLTSDAEKGLPFAAAIRSGLGELKITLRELRYRPVLLR 257 Query: 268 FLLANMIYTDGLVSLFAFGGIYAAGTFGWDTIRIGTFGIILAVAGTFGGWIGGKLDDAFG 327 FL+A M+Y DG+ + GG +AAG FGW T+ IG FGI+L V G + G+LD G Sbjct: 258 FLIARMLYQDGVNGVIILGGAFAAGMFGWATMEIGLFGILLNVVAIAGCFAAGRLDQKLG 317 Query: 328 PKRVITGSLVILLFAIVVILTVNKDSILFIPVA-PPVPGGALFAGAAERAYIVLGCLIGA 386 + I SL +LL A V I++ K S LF + +FA AE+AY++ G LIG Sbjct: 318 SRITILISLALLLLATVGIVSTEKGSTLFGWIQLSTADNDRIFATGAEKAYLLYGVLIGL 377 Query: 387 TGAPLQAASRSLLIRLAPKDRIAQYFGLFALTGKVTSFIGPLLIGAITAATASQKAGMAV 446 P+QA+SRS L R +YFG++AL+G+ TSF+ L T + S GMA Sbjct: 378 AFGPVQASSRSYLARNITVAEAGRYFGIYALSGRATSFMATLSFSIATTISGSAHIGMAT 437 Query: 447 LVAFFVAGLALLAKVRE 463 L+ F AG LL +V E Sbjct: 438 LIVFLGAGFLLLLRVPE 454 >CC2954 Non COG Length = 488 Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 144/425 (33%), Positives = 217/425 (51%), Gaps = 10/425 (2%) Query: 26 ISWIFFDWAAQPYFTLITTFVFAPYFASFVAPDAASGQALWGFATAAAGLAIALLSPVLG 85 +SWI PY L+T +VFAPYF+ + D GQA + GL ALL+P+LG Sbjct: 42 LSWILHQGTRDPYVILVTIYVFAPYFSRVLIGDPVKGQATVADISTTYGLLTALLAPILG 101 Query: 86 AIADASGRRKPWIAGFGALLVIGSSAMWIGKPGNPDIIPMLLLAYAIASVGVEFAT--VF 143 A + G RKP +A A++V +W PG +P+ L+ + +GV + V Sbjct: 102 ASIERYGPRKPLMALGLAIMVPLLFGLWWATPGG---LPVGLIGVFLIILGVVYNCGDVL 158 Query: 144 NNAMMPTLVPPDRIGRLSGTGWATGYVGGILSLVLVLGFLAANAETGRTLFGFTPLFGLD 203 N+++ + LSG G+AT + L+ V+ + + PLFGL Sbjct: 159 QNSLLSRAAEKGQEPVLSGLGYATANGLSVALLIFVMWAFVLPGQVSWSFVPAGPLFGLS 218 Query: 204 PVMHEGDRITGPLTGLWFIIFVTPMFLFTPDYPAK-RPLREALGEGLRELRESLSSLPRQ 262 HE RI GPL + ++ P FL+T D P P AL EG + L ++ +L Sbjct: 219 QADHEPSRIVGPLAAVVMLLGAIPFFLWTRDAPRTGLPFAAALKEGFKLLIDTFGNLKGH 278 Query: 263 KSLARFLLANMIYTDGLVSLFAFGGIYAAGTFGWDTIRIGTFGIILAVAGTFGGWIGGKL 322 +A+FL A M+Y DG+ +L FGG++AAG W + + +GI L++ G GG I L Sbjct: 279 ADVAKFLGARMLYCDGMTALLIFGGLFAAGLMQWGELEMLAYGISLSIFGVLGGLIAPWL 338 Query: 323 DDAFGPKRVITGSLVILLFAIVVILTVNKDSILFIPVAPPVPG----GALFAGAAERAYI 378 D GP+R I + + + ++ +L + ++ IL++ G G +F E Y+ Sbjct: 339 DRVLGPRRAIQLEVGMCILILIAMLGMTREQILYVWPWDASQGVLWNGPIFRTLPEVIYL 398 Query: 379 VLGCLIGATGAPLQAASRSLLIRLAPKDRIAQYFGLFALTGKVTSFIGPLLIGAITAATA 438 LG LI A+SR+LL+RLAP DR+A +FGLF+L+G T ++G LL+ T A Sbjct: 399 GLGLLIAVFVTAQYASSRTLLVRLAPPDRMAAFFGLFSLSGTATMWVGSLLVALATKVFA 458 Query: 439 SQKAG 443 SQ AG Sbjct: 459 SQVAG 463