BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0170.0014.p         (62 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEI0518 [K] COG1278 Cold shock proteins Bme Brucella melitensis       92   3e-19
AGl3376 [K] COG1278 Cold shock proteins Atu Agrobacterium tumefa...    89   2e-18
SMc01428 [K] COG1278 Cold shock proteins Sme Sinorhizobium meliloti    89   2e-18
SMc04318 [K] COG1278 Cold shock proteins Sme Sinorhizobium meliloti    89   3e-18
msr2529 [K] COG1278 Cold shock proteins Mlo Mesorhizobium loti         85   4e-17

>BMEI0518 [K] COG1278 Cold shock proteins Bme Brucella melitensis
          Length = 101

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/61 (68%), Positives = 52/61 (85%), Gaps = 2/61 (3%)

Query: 1  VKWFNPTKGYGFIQPDSGGNDVFVHISAVEKAGFTSLAEGAKVSFDIVKNR--GKESAEN 58
          VKWFN TKG+GFIQPD GG DVFVHISAV++AG T+L EG KVS++IV++R  G+ SA+N
Sbjct: 38 VKWFNTTKGFGFIQPDQGGTDVFVHISAVQRAGLTTLDEGQKVSYEIVQDRRSGRSSADN 97

Query: 59 L 59
          L
Sbjct: 98 L 98


>AGl3376 [K] COG1278 Cold shock proteins Atu Agrobacterium tumefaciens
          strain C58 (Cereon)
          Length = 98

 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 53/62 (85%), Gaps = 2/62 (3%)

Query: 1  VKWFNPTKGYGFIQPDSGGNDVFVHISAVEKAGFTSLAEGAKVSFDIVKNR--GKESAEN 58
          VKWFN TKG+GFIQPD+GG DVFVHISAVE+AG  SL +G K+S++IV++R  GK SA+N
Sbjct: 35 VKWFNATKGFGFIQPDNGGTDVFVHISAVERAGMRSLNDGQKISYEIVQDRRSGKSSADN 94

Query: 59 LR 60
          L+
Sbjct: 95 LQ 96


>SMc01428 [K] COG1278 Cold shock proteins Sme Sinorhizobium meliloti
          Length = 69

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 41/62 (66%), Positives = 51/62 (82%), Gaps = 2/62 (3%)

Query: 1  VKWFNPTKGYGFIQPDSGGNDVFVHISAVEKAGFTSLAEGAKVSFDIVKNR--GKESAEN 58
          VKWFN TKG+GFIQPD G  DVFVHISAVE+AG ++L +G KVSF++ ++R  GK SA+N
Sbjct: 6  VKWFNSTKGFGFIQPDDGAADVFVHISAVERAGLSTLKDGQKVSFELTQDRRSGKTSADN 65

Query: 59 LR 60
          LR
Sbjct: 66 LR 67


>SMc04318 [K] COG1278 Cold shock proteins Sme Sinorhizobium meliloti
          Length = 69

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/62 (67%), Positives = 49/62 (79%), Gaps = 2/62 (3%)

Query: 1  VKWFNPTKGYGFIQPDSGGNDVFVHISAVEKAGFTSLAEGAKVSFDIVKN--RGKESAEN 58
          VKWFN TKG+GFIQPD G  DVFVH SAVE+AG  SL EG KV++DIV++   GK SA+N
Sbjct: 6  VKWFNSTKGFGFIQPDDGATDVFVHASAVERAGMRSLVEGQKVTYDIVRDTKSGKSSADN 65

Query: 59 LR 60
          LR
Sbjct: 66 LR 67


>msr2529 [K] COG1278 Cold shock proteins Mlo Mesorhizobium loti
          Length = 70

 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 40/61 (65%), Positives = 51/61 (83%), Gaps = 2/61 (3%)

Query: 1  VKWFNPTKGYGFIQPDSGGNDVFVHISAVEKAGFTSLAEGAKVSFDIVKNR--GKESAEN 58
          VKWFN TKG+GFIQPD+GG DVFVHISAVE+AG ++L EG K++F+I ++R  GK SA +
Sbjct: 6  VKWFNATKGFGFIQPDAGGADVFVHISAVERAGLSTLVEGQKINFEIEQDRRTGKSSAGS 65

Query: 59 L 59
          L
Sbjct: 66 L 66