BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0169.0012.p         (57 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll9685 [L] COG1793 ATP-dependent DNA ligase Mlo Mesorhizobium loti    63   2e-10
mll8063 [L] COG1793 ATP-dependent DNA ligase Mlo Mesorhizobium loti    61   8e-10

>mll9685 [L] COG1793 ATP-dependent DNA ligase Mlo Mesorhizobium loti
          Length = 337

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/43 (60%), Positives = 33/43 (76%)

Query: 1   VKPKYVVEVSYDHFTGGRFRHGTTILRWRSDKKADQCTMEQMK 43
           V+P+ VVEV +DH TG RFRHGT ++RWR DK   QCT EQ++
Sbjct: 295 VRPELVVEVRFDHVTGDRFRHGTKLVRWRPDKAPLQCTFEQLE 337


>mll8063 [L] COG1793 ATP-dependent DNA ligase Mlo Mesorhizobium loti
          Length = 338

 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 32/43 (74%)

Query: 1   VKPKYVVEVSYDHFTGGRFRHGTTILRWRSDKKADQCTMEQMK 43
           V+P+ VVEV +D  TG RFRHGT +LRWR DK+  QCT  Q++
Sbjct: 296 VRPELVVEVRFDQVTGNRFRHGTKLLRWRPDKEPRQCTFGQIE 338