BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0168.0038.p         (91 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc04320 [J] COG0828 Ribosomal protein S21 Sme Sinorhizobium mel...   117   5e-27
AGl1581 [J] COG0828 Ribosomal protein S21 Atu Agrobacterium tume...   114   4e-26
SMc03934 [J] COG0828 Ribosomal protein S21 Sme Sinorhizobium mel...   114   6e-26
msr3117 [J] COG0828 Ribosomal protein S21 Mlo Mesorhizobium loti      112   1e-25
AGl2379 [J] COG0828 Ribosomal protein S21 Atu Agrobacterium tume...   110   5e-25

>SMc04320 [J] COG0828 Ribosomal protein S21 Sme Sinorhizobium meliloti
          Length = 78

 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 64/69 (92%)

Query: 1  VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60
          +QVLVRDNN+DQAL+ LKKKMQREG+FREMK+R  YEKPSEK+ REKAEAVRR RKLARK
Sbjct: 1  MQVLVRDNNIDQALRVLKKKMQREGVFREMKMRSAYEKPSEKRVREKAEAVRRTRKLARK 60

Query: 61 KLQREGLLP 69
          KLQREGLLP
Sbjct: 61 KLQREGLLP 69


>AGl1581 [J] COG0828 Ribosomal protein S21 Atu Agrobacterium tumefaciens
          strain C58 (Cereon)
          Length = 75

 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/68 (83%), Positives = 65/68 (95%)

Query: 1  VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60
          +QVLVRDNNVDQAL+ALKKKMQREGIFREMK+R +YEKPS+K+AREKAEAVRR RKLARK
Sbjct: 1  MQVLVRDNNVDQALRALKKKMQREGIFREMKMRDYYEKPSQKRAREKAEAVRRVRKLARK 60

Query: 61 KLQREGLL 68
          + QREGL+
Sbjct: 61 RAQREGLI 68


>SMc03934 [J] COG0828 Ribosomal protein S21 Sme Sinorhizobium meliloti
          Length = 84

 Score =  114 bits (285), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 64/69 (92%)

Query: 1  VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60
          VQVLVRDNNVDQAL+ALKKKMQREGIFREMK+R  YEKPS+K+AREKAEAVRR RKLARK
Sbjct: 15 VQVLVRDNNVDQALRALKKKMQREGIFREMKMRDFYEKPSQKRAREKAEAVRRVRKLARK 74

Query: 61 KLQREGLLP 69
          + QREG++ 
Sbjct: 75 RAQREGIVA 83


>msr3117 [J] COG0828 Ribosomal protein S21 Mlo Mesorhizobium loti
          Length = 88

 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 65/73 (89%), Positives = 71/73 (97%)

Query: 1  VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60
          +QVLVRDNNVDQAL+ALKKKMQREGIFREMK+RGHYEKPSEK+AREKAEAVRRARKLARK
Sbjct: 1  MQVLVRDNNVDQALRALKKKMQREGIFREMKMRGHYEKPSEKRAREKAEAVRRARKLARK 60

Query: 61 KLQREGLLPMKPK 73
          + QREGLLPM P+
Sbjct: 61 RAQREGLLPMTPR 73


>AGl2379 [J] COG0828 Ribosomal protein S21 Atu Agrobacterium tumefaciens
          strain C58 (Cereon)
          Length = 91

 Score =  110 bits (276), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 66/73 (90%)

Query: 1  VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60
          +QVLVRDNNVDQAL+ LKKK+QREG+FREM+LR  +EKPS KKAREKAEA+ R RKLARK
Sbjct: 16 MQVLVRDNNVDQALRILKKKLQREGVFREMRLREAFEKPSIKKAREKAEAIGRQRKLARK 75

Query: 61 KLQREGLLPMKPK 73
          ++QREGLLP KP+
Sbjct: 76 QMQREGLLPTKPR 88