BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0168.0037.p (220 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr3120 [R] COG0457 FOG Mlo Mesorhizobium loti 110 2e-24 SMc03935 [R] COG0457 FOG Sme Sinorhizobium meliloti 108 1e-23 BMEII0334 [R] COG0457 FOG Bme Brucella melitensis 105 6e-23 AGl1582 [R] COG0457 FOG Atu Agrobacterium tumefaciens strain C58... 101 1e-21 FN1787 [R] COG0457 FOG Fnu Fusobacterium nucleatum 85 1e-16 >mlr3120 [R] COG0457 FOG Mlo Mesorhizobium loti Length = 280 Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 59/143 (41%), Positives = 84/143 (58%) Query: 76 HTTRAQVLARSGKLDEAMAEFEQALVADPYNIQALYGRALIYQGRGQHQQAIDDFTAASG 135 + R + ++G+ +A +F++A+ D + +A + R LIYQ +GQH+ AI+DF+ A Sbjct: 137 YIGRGNLYRKAGRTQDAFNDFQKAIQLDTTDARAYHNRGLIYQSQGQHKFAIEDFSTAIS 196 Query: 136 LSPQKAEPLVGRATSYLALDKAKQAASDLDEAVQADPSNVAAWSARGQAYERLGDKAKAA 195 L+P AEP GR SYLA A SD + A++ D N AW+ + YER GDKAKAA Sbjct: 197 LAPDAAEPYNGRGLSYLATGDEDNAFSDFNMAIKLDGQNAEAWANQALIYERRGDKAKAA 256 Query: 196 ASYNRALALRPGDGNARSGLART 218 SY A+ L P A+ GLAR Sbjct: 257 KSYKEAVRLNPNYQPAKDGLARV 279 >SMc03935 [R] COG0457 FOG Sme Sinorhizobium meliloti Length = 295 Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 3/164 (1%) Query: 54 AATADKPAADTITPQDVNSAKDHTTRAQVLARSGKLDEAMAEFEQALVADPYNIQALYGR 113 AA AD AA I P N + R + ++ +LD A +F +A+ D + +A + R Sbjct: 130 AALADYNAALQINP---NYDVAYIGRGNLYRQANQLDAAFNDFNKAIELDTADPRAYHNR 186 Query: 114 ALIYQGRGQHQQAIDDFTAASGLSPQKAEPLVGRATSYLALDKAKQAASDLDEAVQADPS 173 LIYQ R QH QAI+DF+ A LSP EP GR SY+A A SD + A+ + Sbjct: 187 GLIYQARNQHAQAIEDFSKAISLSPSSPEPYNGRGISYVAQGDDDNAFSDFNTAINLNGK 246 Query: 174 NVAAWSARGQAYERLGDKAKAAASYNRALALRPGDGNARSGLAR 217 +W+ + YER GDKAKAA SY+ AL+L P AR+GLAR Sbjct: 247 LAESWANQALIYERRGDKAKAAKSYSHALSLDPKYEPARAGLAR 290 Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 22/217 (10%) Query: 1 MTADPGSRPLFPGPAQRR--RAPHLVIIAVL-LGLPLGGCSFDLGSWGSSDDKPKPAATA 57 MTAD L A RR R P L VL L + GC DKP+ Sbjct: 6 MTADVSG--LITEEANRRHQRKPKLAAFLVLGSALLIAGCQ---------TDKPESMFRV 54 Query: 58 DKP--------AADTITPQDVNSAKDHTTRAQVLARSGKLDEAMAEFEQALVADPYNIQA 109 ++ + ++ + + + + R R+G+ A+A+F+QA+ +P QA Sbjct: 55 ERAQGSEENIASLSSVIASNPSDPEGYNVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQA 114 Query: 110 LYGRALIYQGRGQHQQAIDDFTAASGLSPQKAEPLVGRATSYLALDKAKQAASDLDEAVQ 169 RAL+ + G Q A+ D+ AA ++P +GR Y ++ A +D ++A++ Sbjct: 115 YANRALVQRNLGNQQAALADYNAALQINPNYDVAYIGRGNLYRQANQLDAAFNDFNKAIE 174 Query: 170 ADPSNVAAWSARGQAYERLGDKAKAAASYNRALALRP 206 D ++ A+ RG Y+ A+A +++A++L P Sbjct: 175 LDTADPRAYHNRGLIYQARNQHAQAIEDFSKAISLSP 211 >BMEII0334 [R] COG0457 FOG Bme Brucella melitensis Length = 255 Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 59/145 (40%), Positives = 83/145 (57%) Query: 76 HTTRAQVLARSGKLDEAMAEFEQALVADPYNIQALYGRALIYQGRGQHQQAIDDFTAASG 135 + R V ++G LD+A+ +F QA+ + +A + R LIYQ +G H+QAI+DF+ A Sbjct: 111 YIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAIS 170 Query: 136 LSPQKAEPLVGRATSYLALDKAKQAASDLDEAVQADPSNVAAWSARGQAYERLGDKAKAA 195 L+ EP GR SY+AL A D + A+ D + +W+ + YE GDKAKAA Sbjct: 171 LNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGDKAKAA 230 Query: 196 ASYNRALALRPGDGNARSGLARTGG 220 SY RA+ L P A+ GLART G Sbjct: 231 NSYARAVQLDPKYKPAKDGLARTRG 255 Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 67/129 (51%) Query: 76 HTTRAQVLARSGKLDEAMAEFEQALVADPYNIQALYGRALIYQGRGQHQQAIDDFTAASG 135 + R ++G+ EAM +F+QA+ +P QA RAL+ + G + +A+ D++ A Sbjct: 43 YNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQ 102 Query: 136 LSPQKAEPLVGRATSYLALDKAKQAASDLDEAVQADPSNVAAWSARGQAYERLGDKAKAA 195 L+PQ +GR Y QA +D ++A+ ++ A+ RG Y+ G +A Sbjct: 103 LNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAI 162 Query: 196 ASYNRALAL 204 +++A++L Sbjct: 163 EDFSKAISL 171 >AGl1582 [R] COG0457 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 336 Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 82/142 (57%) Query: 79 RAQVLARSGKLDEAMAEFEQALVADPYNIQALYGRALIYQGRGQHQQAIDDFTAASGLSP 138 R + +SG+++EA +F +A+ + + +A + R LIYQ R QH QAI+DF+ A LS Sbjct: 191 RGNLYRQSGRVNEAFNDFSRAIELETTDGRAWHNRGLIYQLRNQHAQAIEDFSKAISLSS 250 Query: 139 QKAEPLVGRATSYLALDKAKQAASDLDEAVQADPSNVAAWSARGQAYERLGDKAKAAASY 198 EP GR SY+AL+ + A +D + A+ D +W+ + YER GD AKAA SY Sbjct: 251 TSPEPYNGRGLSYVALNDDENAFADFNHAISLDDKVAESWANQALVYERRGDMAKAAKSY 310 Query: 199 NRALALRPGDGNARSGLARTGG 220 + A L P A G+ART G Sbjct: 311 SHAARLDPKYKPALDGVARTRG 332 Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 17/210 (8%) Query: 2 TADPGSRPLFPGPAQRRRAPHLVIIAVLLGLPLGGCSFDLGSWGSSDD-------KPKPA 54 AD +R L P R LVI VL GL GC+ + ++D + Sbjct: 49 NADASTRRL-PLKNNRGFRASLVICTVLAGLS--GCA----TSNQTEDVFRIDRAQGSQE 101 Query: 55 ATADKPAADTITPQDVNSAKDHTTRAQVLARSGKLDEAMAEFEQALVADPYNIQALYGRA 114 A + PQD + + R R+G A+ +F +AL +P QA RA Sbjct: 102 NIASLTSVINANPQD---PEGYNVRGSAYGRAGDSRRAIEDFNKALQLNPRFYQAYANRA 158 Query: 115 LIYQGRGQHQQAIDDFTAASGLSPQKAEPLVGRATSYLALDKAKQAASDLDEAVQADPSN 174 L+Y+ GQ QQA+ D+ AA ++ L+GR Y + +A +D A++ + ++ Sbjct: 159 LVYRNSGQQQQALQDYNAALQINASYDVALIGRGNLYRQSGRVNEAFNDFSRAIELETTD 218 Query: 175 VAAWSARGQAYERLGDKAKAAASYNRALAL 204 AW RG Y+ A+A +++A++L Sbjct: 219 GRAWHNRGLIYQLRNQHAQAIEDFSKAISL 248 >FN1787 [R] COG0457 FOG Fnu Fusobacterium nucleatum Length = 628 Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 77/139 (55%) Query: 69 DVNSAKDHTTRAQVLARSGKLDEAMAEFEQALVADPYNIQALYGRALIYQGRGQHQQAID 128 D N+A ++R + ++++ ++ +A+ DP N R L Y+ ++++AI+ Sbjct: 159 DPNNAAYFSSRGDIYYYEKAYNKSIEDYNKAIKLDPNNAFYYDNRGLAYEKLKKYKEAIN 218 Query: 129 DFTAASGLSPQKAEPLVGRATSYLALDKAKQAASDLDEAVQADPSNVAAWSARGQAYERL 188 D+ A L+P A R +Y L K K+A +D D+A++ DP+N + ++ RG AY L Sbjct: 219 DYNKAIKLNPNNAFYCYNRGFTYNKLKKYKEAINDYDKAIKLDPNNASYFNNRGVAYNNL 278 Query: 189 GDKAKAAASYNRALALRPG 207 G+ +KA Y++A+ L P Sbjct: 279 GEYSKALEDYDKAIKLNPN 297 Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 65/121 (53%) Query: 88 KLDEAMAEFEQALVADPYNIQALYGRALIYQGRGQHQQAIDDFTAASGLSPQKAEPLVGR 147 K +EA+ ++ +A+ + N Y RA Y ++ +AI+D+ A L+P A R Sbjct: 42 KYEEAINDYNRAIELNLNNASYYYNRACSYYCSNKYDKAIEDYDKAIKLNPNDACYFNNR 101 Query: 148 ATSYLALDKAKQAASDLDEAVQADPSNVAAWSARGQAYERLGDKAKAAASYNRALALRPG 207 SY AL+K +A D D+A++ DP+N + + RG +Y L KA YN+A+ L P Sbjct: 102 GHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLDPN 161 Query: 208 D 208 + Sbjct: 162 N 162 Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 73/140 (52%) Query: 69 DVNSAKDHTTRAQVLARSGKLDEAMAEFEQALVADPYNIQALYGRALIYQGRGQHQQAID 128 ++N+A + RA S K D+A+ ++++A+ +P + R Y ++ +AI+ Sbjct: 57 NLNNASYYYNRACSYYCSNKYDKAIEDYDKAIKLNPNDACYFNNRGHSYFALNKYSEAIE 116 Query: 129 DFTAASGLSPQKAEPLVGRATSYLALDKAKQAASDLDEAVQADPSNVAAWSARGQAYERL 188 D+ A L P A R SY AL+K +A D ++A++ DP+N A +S+RG Y Sbjct: 117 DYDKAIKLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYE 176 Query: 189 GDKAKAAASYNRALALRPGD 208 K+ YN+A+ L P + Sbjct: 177 KAYNKSIEDYNKAIKLDPNN 196 Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 3/154 (1%) Query: 55 ATADKPAADTITPQDVNSAKDHTTRAQVLARSGKLDEAMAEFEQALVADPYNIQALYGRA 114 A D A + P D A R K EA+ ++++A+ DP N Y R Sbjct: 80 AIEDYDKAIKLNPND---ACYFNNRGHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRG 136 Query: 115 LIYQGRGQHQQAIDDFTAASGLSPQKAEPLVGRATSYLALDKAKQAASDLDEAVQADPSN 174 Y ++ +AI+D+ A L P A R Y ++ D ++A++ DP+N Sbjct: 137 FSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAYNKSIEDYNKAIKLDPNN 196 Query: 175 VAAWSARGQAYERLGDKAKAAASYNRALALRPGD 208 + RG AYE+L +A YN+A+ L P + Sbjct: 197 AFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNN 230 Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 71/139 (51%) Query: 69 DVNSAKDHTTRAQVLARSGKLDEAMAEFEQALVADPYNIQALYGRALIYQGRGQHQQAID 128 D N+A + R + K EA+ ++ +A+ +P N Y R Y ++++AI+ Sbjct: 193 DPNNAFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLKKYKEAIN 252 Query: 129 DFTAASGLSPQKAEPLVGRATSYLALDKAKQAASDLDEAVQADPSNVAAWSARGQAYERL 188 D+ A L P A R +Y L + +A D D+A++ +P+ A++ +G ++ L Sbjct: 253 DYDKAIKLDPNNASYFNNRGVAYNNLGEYSKALEDYDKAIKLNPNYTFAYNNKGITFDNL 312 Query: 189 GDKAKAAASYNRALALRPG 207 G+ +A +YN+A+ L P Sbjct: 313 GEFEEAIMNYNKAIELDPS 331 Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 67/140 (47%) Query: 69 DVNSAKDHTTRAQVLARSGKLDEAMAEFEQALVADPYNIQALYGRALIYQGRGQHQQAID 128 D N+A + R K D+A+ ++ +A+ DP N R IY + ++I+ Sbjct: 125 DPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAYNKSIE 184 Query: 129 DFTAASGLSPQKAEPLVGRATSYLALDKAKQAASDLDEAVQADPSNVAAWSARGQAYERL 188 D+ A L P A R +Y L K K+A +D ++A++ +P+N RG Y +L Sbjct: 185 DYNKAIKLDPNNAFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKL 244 Query: 189 GDKAKAAASYNRALALRPGD 208 +A Y++A+ L P + Sbjct: 245 KKYKEAINDYDKAIKLDPNN 264