BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0168.0031.p (306 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMb20659 [G] COG1175 ABC-type sugar transport systems, permease ... 375 e-104 SMa0710 [G] COG1175 ABC-type sugar transport systems, permease c... 154 3e-37 PM1761 [G] COG1175 ABC-type sugar transport systems, permease co... 148 1e-35 mlr7001 [G] COG1175 ABC-type sugar transport systems, permease c... 148 2e-35 BH1245 [G] COG1175 ABC-type sugar transport systems, permease co... 147 3e-35 >SMb20659 [G] COG1175 ABC-type sugar transport systems, permease components Sme Sinorhizobium meliloti Length = 310 Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust. Identities = 195/303 (64%), Positives = 242/303 (79%), Gaps = 1/303 (0%) Query: 3 QPGWLARLFDYKPFLIVMCLAPAIGLLLVFLTYPLGLGIWLAFTDTTIGQRGIYIGLENF 62 +P A L L + + PA L+ FLTYPLGLG+WL FTDT IG+ G++IG+EN+ Sbjct: 9 KPSTTASLMQNNNVLGFLFMLPAAVFLICFLTYPLGLGVWLGFTDTRIGRDGVFIGIENY 68 Query: 63 QYLLKDPLWWNAVFYSIFYTAIATFGKFALGFWLALLLNNHFPFKSLIRAIVLLPWIVPT 122 ++L +D ++W +V+ ++ YT +A+ KF LG WLALLLN + PFKS RAIVLLPW+VPT Sbjct: 69 EFLARDSVFWLSVYNTLLYTFVASILKFVLGLWLALLLNENLPFKSFFRAIVLLPWVVPT 128 Query: 123 VLSALAFWWIYDPQFSIISYLLVDVLHWRDSNVDFLGSPWPARFSLIAANIWRGIPFVAI 182 VLSALAFWWIYD QFSIIS+ L+ L D ++FLG P AR S+IAAN+WRGIPFVAI Sbjct: 129 VLSALAFWWIYDSQFSIISWSLMQ-LGIIDGPINFLGDPNNARASVIAANVWRGIPFVAI 187 Query: 183 SLLAGLQTISPSLYEAAMLDGATSWQRFRYITFPMMMPILAIVMTFSIIFTFTDFQLVYA 242 SLLAGLQTI SL EAA LDGATSWQRFRY+T PM+ PI+A+VMTFS++FTFTDFQL+Y Sbjct: 188 SLLAGLQTIPASLQEAASLDGATSWQRFRYVTLPMLTPIIAVVMTFSVLFTFTDFQLIYV 247 Query: 243 ITRGGPVNSTHLLATLAFQRGIAGGELGEGAAIAVSMIPFLVFATLFSYFGLARRKWQQG 302 +T+GGPVN+THL+ATL+FQRGI GG+LGEGAAIAV+MIPFL+ A +FS+FGL RRKWQQG Sbjct: 248 LTKGGPVNATHLMATLSFQRGIPGGQLGEGAAIAVAMIPFLLAAIMFSFFGLQRRKWQQG 307 Query: 303 EAN 305 + Sbjct: 308 GQD 310 >SMa0710 [G] COG1175 ABC-type sugar transport systems, permease components Sme Sinorhizobium meliloti Length = 301 Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 85/259 (32%), Positives = 142/259 (54%), Gaps = 4/259 (1%) Query: 33 LTYPLGLGIWLAFTD---TTIGQRGIYIGLENFQYLLKDPLWWNAVFYSIFYTAIATFGK 89 + YPL + + L+F T+ LEN+ L P +WN+ + +I + + Sbjct: 33 IVYPLFVSLDLSFQKIGMATLSAPRKPFTLENYHKLFASPDFWNSCWVTIKLVVVVSAAC 92 Query: 90 FALGFWLALLLNNHFPFKSLIRAIVLLPWIVPTVLSALAFWWIYDPQFSIISYLLVDVLH 149 FA+G ALL+NN F ++L R V LPW VP V++ + F WI+D F ++++L + L Sbjct: 93 FAVGLGTALLVNNRFKGRTLARLFVALPWAVPEVIAVVIFAWIFDSSFGLMNWLFIK-LG 151 Query: 150 WRDSNVDFLGSPWPARFSLIAANIWRGIPFVAISLLAGLQTISPSLYEAAMLDGATSWQR 209 +++ P A + + IW+G PFV+I LAGLQ+I Y AA +DGA ++QR Sbjct: 152 ITSQMINWFSEPTAAFWVVAITMIWKGYPFVSIMTLAGLQSIPEDFYNAAKVDGANAFQR 211 Query: 210 FRYITFPMMMPILAIVMTFSIIFTFTDFQLVYAITRGGPVNSTHLLATLAFQRGIAGGEL 269 F YIT P++MP+L + +++ F DF ++ +T GGP+ +T L+ + + + + Sbjct: 212 FWYITIPVLMPVLGVTSVLVVLWVFRDFSIIKVLTDGGPLKATQTLSIMTYDQAFGFFNM 271 Query: 270 GEGAAIAVSMIPFLVFATL 288 G +AI + + V A+L Sbjct: 272 GYASAIGIVTLVLCVVASL 290 >PM1761 [G] COG1175 ABC-type sugar transport systems, permease components Pmu Pasteurella multocida Length = 294 Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 93/281 (33%), Positives = 157/281 (55%), Gaps = 3/281 (1%) Query: 24 PAIGLLLVFLTYPLGLGIWLAFTDTT-IGQRGIYIGLENFQYLLKDPLWWNAVFYSIFYT 82 PAI ++ V YP I+ +FT+ I ++GL N++ +L DP +W + F S+ +T Sbjct: 16 PAILVVSVLFIYPFLSSIFYSFTNKNLIMPHYSFVGLANYRAVLSDPNFWMSFFNSLKWT 75 Query: 83 AIATFGKFALGFWLALLLNNHFPFKSLIRAIVLLPWIVPTVLSALAFWWIYDPQFSIISY 142 + G+ +GF+LAL LN FK L + ++++PW PT++ A ++ WI + + + Sbjct: 76 IFSLTGQVLVGFFLALALNRVKHFKWLYKILLIIPWAFPTIVIAFSWQWILNGVYGYLPN 135 Query: 143 LLVDVLHWRDSNVDFLGSPWPARFSLIAANIWRGIPFVAISLLAGLQTISPSLYEAAMLD 202 +LV L + +FL A L+ NIW G P + +++L+ LQT+ YEAA +D Sbjct: 136 MLVQ-LGLMEIAPNFLSDRTWAFVCLVFINIWFGAPMIMVNVLSALQTVPADQYEAAKID 194 Query: 203 GATSWQRFRYITFPMMMPILAIVMTFSIIFTFTDFQLVYAITRGGPVNSTHLLATLAFQR 262 GA +WQ FRYIT P + ++ +++ ++ F +F ++Y IT GGP N+T L A+ Sbjct: 195 GANAWQIFRYITLPHIKVVVGLLVVLRTVWVFNNFDIIYLITGGGPANATMTLPIFAYDM 254 Query: 263 GIAGGELGEGAAIAVSMIPFLVFATLFSYFGLARRKWQQGE 303 G LG +A+ V + FL+ + F YF + R ++G+ Sbjct: 255 GWGSKLLGRSSAVTVLLFIFLL-SVCFIYFKIINRWEKEGK 294 >mlr7001 [G] COG1175 ABC-type sugar transport systems, permease components Mlo Mesorhizobium loti Length = 317 Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/280 (34%), Positives = 155/280 (55%), Gaps = 3/280 (1%) Query: 3 QPGWLARLFDYKPFLIVMCLAPAIGLLLVFLTYPLGLGIWLAFTD-TTIGQRGIYIGLEN 61 + G L R +M LAPA+ VF YP+ I L+F + ++GL+N Sbjct: 17 RSGQLGRKLQDPTLQGLMLLAPAVLAYAVFAFYPMIDVIQLSFMKWNGLNADKHWVGLDN 76 Query: 62 FQYLL-KDPLWWNAVFYSIFYTAIATFGKFALGFWLALLLNNHFPFKSLIRAIVLLPWIV 120 ++Y+L DP++W A+ ++ +T ++ +GF LAL LN + P +S +RA+ +P I+ Sbjct: 77 YRYVLHDDPVFWVALKNTLIWTFLSVIFPPLIGFGLALGLNQNIPGRSPLRALFYMPVII 136 Query: 121 PTVLSALAFWWIYDPQFSIISYLLVDVLHWRDSNVDFLGSPWPARFSLIAANIWRGIPFV 180 + A + W++DP F + + LL W + D+LG A +S+ A +W F Sbjct: 137 APIAVATMWRWMFDPFFGLFNSLL-SAAGWPNLIQDWLGDRNVALYSVFIAYVWEVAGFS 195 Query: 181 AISLLAGLQTISPSLYEAAMLDGATSWQRFRYITFPMMMPILAIVMTFSIIFTFTDFQLV 240 + LAGLQ +S +L EAA +DGA Q FRY+T P + P + IV+ S+I + F +V Sbjct: 196 MVLFLAGLQGVSQTLVEAARIDGAGRLQLFRYVTLPALRPTITIVLILSLINSLKAFDIV 255 Query: 241 YAITRGGPVNSTHLLATLAFQRGIAGGELGEGAAIAVSMI 280 Y +T GGP ST +LA A+ + + G+ G G+AI+V ++ Sbjct: 256 YGMTGGGPAQSTQMLAMWAYTQAMQLGDFGRGSAISVVLL 295 >BH1245 [G] COG1175 ABC-type sugar transport systems, permease components Bha Bacillus halodurans Length = 445 Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 133/222 (59%), Gaps = 1/222 (0%) Query: 56 YIGLENFQYLLKDPLWWNAVFYSIFYTAIATFGKFALGFWLALLLNNHFPFKSLIRAIVL 115 +IG ++ ++D W A+ ++F+T ++ + LG +ALL+N F + L+R VL Sbjct: 196 FIGFSHYVNYVQDSRMWAAMSNTLFFTVVSVAAELVLGLAIALLINRTFKGRGLVRVAVL 255 Query: 116 LPWIVPTVLSALAFWWIYDPQFSIISYLLVDVLHWRDSNVDFLGSPWPARFSLIAANIWR 175 +PW +PT ++A+ + ++YD QF +I++ + DS+V L + A FS+I A++W+ Sbjct: 256 IPWAIPTAVAAMMWRYLYDGQFGVIAHYFEQLGLISDSSV-LLSTGAGAMFSIIFADVWK 314 Query: 176 GIPFVAISLLAGLQTISPSLYEAAMLDGATSWQRFRYITFPMMMPILAIVMTFSIIFTFT 235 P++A+ LLAGLQTI SLYEAA +DGA Q F IT P++ + + + F + F Sbjct: 315 TTPYMALLLLAGLQTIPNSLYEAAKVDGANRIQTFFKITLPLLKSAILVALLFRTLDAFR 374 Query: 236 DFQLVYAITRGGPVNSTHLLATLAFQRGIAGGELGEGAAIAV 277 F L++ +T GGP NST ++ A++ + G G+A++V Sbjct: 375 VFDLIFVLTGGGPANSTESISIYAYRTLFSQQNFGAGSALSV 416