BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0167.0011.p         (139 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2984 [S] COG4315 Uncharacterized protein conserved in bacteri...   132   3e-31
AGc3676 [S] COG4315 Uncharacterized protein conserved in bacteri...   125   2e-29
SMc01418 Non COG                                                      124   8e-29
PA5359 [S] COG4315 Uncharacterized protein conserved in bacteria...   121   6e-28
AGc2741 [S] COG4315 Uncharacterized protein conserved in bacteri...   117   6e-27

>RSc2984 [S] COG4315 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 148

 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/101 (63%), Positives = 75/101 (74%), Gaps = 2/101 (1%)

Query: 40  TATSAKGSVLTDAKGMTLYTFDKDS-EGKSACNGPCATNWPVLKADANDKAEGAYTIISR 98
           +A       LTDA GMTLYTFD+D+  GKSACNG CA NWP L A+  DK  G YTII R
Sbjct: 49  SAVKVTNGSLTDAHGMTLYTFDRDTMAGKSACNGNCANNWPPLTANDADKGSGDYTIIVR 108

Query: 99  DDGSKQWAYKGKPLYTFAKDQKAGDITGDGFLNGAWHLAQP 139
           DDG KQWAY+GKPLY ++KD+  GD TGDGF+N AWH+A+P
Sbjct: 109 DDGKKQWAYRGKPLYLWSKDKMPGDQTGDGFMN-AWHIAKP 148


>AGc3676 [S] COG4315 Uncharacterized protein conserved in bacteria Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 140

 Score =  125 bits (314), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/133 (50%), Positives = 81/133 (60%), Gaps = 2/133 (1%)

Query: 7   RKGDIMKTSISLALATAASLAFASAAFAAPPTKTATSAKGSVLTDAKGMTLYTFDKDSEG 66
           R  + M   I   +  A  LAFA  A+AAP  +T  + KG+VL   KGMTLYTF  D +G
Sbjct: 10  RTKEDMSMKIRF-IVPALVLAFAGTAYAAPAVETVKTDKGNVLAGEKGMTLYTFKNDKKG 68

Query: 67  KSACNGPCATNWPVLKADANDKAEGAYTIISRDDGSKQWAYKGKPLYTFAKDQKAGDITG 126
            S C   CA NWP   A A+DKAEGAY+++ R DG  QWA  G PLY + KD K GD TG
Sbjct: 69  VSNCYDKCAVNWPPFFAAASDKAEGAYSLLKRKDGKMQWAKDGMPLYYWVKDTKKGDATG 128

Query: 127 DGFLNGAWHLAQP 139
           DG +NG W  A+P
Sbjct: 129 DG-MNGVWDAAKP 140


>SMc01418 Non COG
          Length = 124

 Score =  124 bits (310), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 1/123 (0%)

Query: 17  SLALATAASLAFASAAFAAPPTKTATSAKGSVLTDAKGMTLYTFDKDSEGKSACNGPCAT 76
           +LAL  A SL  A+AAFAAPP KT  S KG VL    GMTLYT+  D +G SAC   CA 
Sbjct: 3   TLALTIAISLGTAAAAFAAPPVKTVESEKGPVLAAENGMTLYTYKDDQKGVSACYDACAK 62

Query: 77  NWPVLKADANDKAEGAYTIISRDDGSKQWAYKGKPLYTFAKDQKAGDITGDGFLNGAWHL 136
           NWP    + +  AEGAY+I+ R DG+KQWA  G PLY + KD+K GD+TGDG + G W +
Sbjct: 63  NWPPFMVEGDAAAEGAYSIVERKDGTKQWAKDGMPLYFWVKDEKMGDVTGDG-VKGEWDV 121

Query: 137 AQP 139
           A+P
Sbjct: 122 ARP 124


>PA5359 [S] COG4315 Uncharacterized protein conserved in bacteria Pae
           Pseudomonas aeruginosa
          Length = 151

 Score =  121 bits (303), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 75/97 (77%), Gaps = 1/97 (1%)

Query: 43  SAKGSVLTDAKGMTLYTFDKDSEGKSACNGPCATNWPVLKADANDKAEGAYTIISRDDGS 102
           + K  VL D KGMTLYT+DKDSEG+SAC+G CA NWP L A    +A G +++++R+DG+
Sbjct: 53  TEKDGVLVDGKGMTLYTYDKDSEGQSACSGQCAKNWPPLAAAQGAQASGDWSLVAREDGT 112

Query: 103 KQWAYKGKPLYTFAKDQKAGDITGDGFLNGAWHLAQP 139
           +QWAY GKPLYTF +D+K GD  GDG + GAWH+AQP
Sbjct: 113 QQWAYYGKPLYTFIQDKKPGDKNGDGKM-GAWHVAQP 148


>AGc2741 [S] COG4315 Uncharacterized protein conserved in bacteria Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 129

 Score =  117 bits (294), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 62/122 (50%), Positives = 81/122 (66%), Gaps = 4/122 (3%)

Query: 17  SLALATAASLAFASAAFAAPPTKTATSAKGSVLTDAKGMTLYTFDKDSEGKSACNGPCAT 76
           ++ALA+ A+LA     +A        +AKG++LTDAKGMTLYTFD D +  SAC   CA 
Sbjct: 11  AMALASTAALA---EPYAGGAVVEKATAKGTILTDAKGMTLYTFDNDGDASSACYDGCAK 67

Query: 77  NWPVLKADANDKAEGAYTIISRDDGSKQWAYKGKPLYTFAKDQKAGDITGDGFLNGAWHL 136
            WP L A   DKA+G Y  I+R DG+ QW++ GKPLY +  D+K GDITGDG + G WH+
Sbjct: 68  KWPPLAALKTDKADGDYKPIARKDGTMQWSHDGKPLYRWQMDKKPGDITGDG-VGGVWHV 126

Query: 137 AQ 138
           A+
Sbjct: 127 AK 128