BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0165.0015.p         (123 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1461 [S] COG1285 Uncharacterized membrane protein Rso Ralston...   135   2e-32
slr0014 [S] COG1285 Uncharacterized membrane protein Syn Synecho...   122   2e-28
BMEII0053 [S] COG1285 Uncharacterized membrane protein Bme Bruce...   122   3e-28
YPO1660 [S] COG1285 Uncharacterized membrane protein Ype Yersini...   117   6e-27
PA4635 [S] COG1285 Uncharacterized membrane protein Pae Pseudomo...   112   2e-25

>RSc1461 [S] COG1285 Uncharacterized membrane protein Rso Ralstonia
           solanacearum
          Length = 240

 Score =  135 bits (341), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/115 (66%), Positives = 90/115 (78%)

Query: 7   FQLADFIDTLVSLTTAFVLGTLIGAERQYRQRTAGLRTNVLVAVGAAAFVDLAMHLAGAD 66
           F  A  +D+ +SL  AF LG+LIG ERQ RQRTAGLRTN LVAV A+AFVD+A  +    
Sbjct: 9   FNAATLLDSFISLAAAFGLGSLIGFERQVRQRTAGLRTNALVAVSASAFVDMAAQIGSPA 68

Query: 67  GAVRVIAYVVSGIGFLGAGVIMKQGMDVRGLNTAATLWASAAVGSCAGADLVAQA 121
              RVIAYVVSG+GFLGAG IMK+G++VRGLNTAATLW SAAVG+ AG+DL+ QA
Sbjct: 69  DTTRVIAYVVSGVGFLGAGTIMKEGLNVRGLNTAATLWGSAAVGAAAGSDLLGQA 123


>slr0014 [S] COG1285 Uncharacterized membrane protein Syn Synechocystis
          Length = 234

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 82/111 (73%)

Query: 11  DFIDTLVSLTTAFVLGTLIGAERQYRQRTAGLRTNVLVAVGAAAFVDLAMHLAGADGAVR 70
           ++ ++L+ LT AFVLG+ +G ERQ+RQR AGLRTN LVA+GAA FV +++         R
Sbjct: 2   EWNESLLRLTVAFVLGSTLGIERQWRQRMAGLRTNTLVAIGAALFVIVSVLTNHDSSPTR 61

Query: 71  VIAYVVSGIGFLGAGVIMKQGMDVRGLNTAATLWASAAVGSCAGADLVAQA 121
           + A +VSGIGFL  GVI+K+G+ V+GLNTAATLW SAAVG+  G  L ++A
Sbjct: 62  IPAQIVSGIGFLAGGVILKEGLTVKGLNTAATLWCSAAVGTLCGQGLFSEA 112


>BMEII0053 [S] COG1285 Uncharacterized membrane protein Bme Brucella
           melitensis
          Length = 246

 Score =  122 bits (305), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/108 (61%), Positives = 77/108 (71%)

Query: 14  DTLVSLTTAFVLGTLIGAERQYRQRTAGLRTNVLVAVGAAAFVDLAMHLAGADGAVRVIA 73
            T   L  AF+LG LIG ERQ+R R AGLRTN LVAVGAA FV  +  ++G     RV A
Sbjct: 16  HTAACLAGAFLLGGLIGFERQFRHRLAGLRTNTLVAVGAATFVVFSSLVSGDSSPTRVAA 75

Query: 74  YVVSGIGFLGAGVIMKQGMDVRGLNTAATLWASAAVGSCAGADLVAQA 121
            +VSGIGFLGAG+I K+G +VRGLNTAATLW SAAVG   GA L++ A
Sbjct: 76  QIVSGIGFLGAGIIFKEGFNVRGLNTAATLWCSAAVGVLCGAGLISHA 123


>YPO1660 [S] COG1285 Uncharacterized membrane protein Ype Yersinia pestis
          Length = 236

 Score =  117 bits (294), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 60/99 (60%), Positives = 74/99 (74%), Gaps = 1/99 (1%)

Query: 16  LVSLTTAFVLGTLIGAERQYRQRTAGLRTNVLVAVGAAAFVDLAMHLAGADGAVRVIAYV 75
           +++L  A  LG LIGAERQ+RQR AGLRTN LVA GAA F+ L+ +    D   R+ A +
Sbjct: 11  VMNLLLAMCLGALIGAERQWRQRMAGLRTNALVATGAAVFI-LSSYATSPDSPGRIAAQI 69

Query: 76  VSGIGFLGAGVIMKQGMDVRGLNTAATLWASAAVGSCAG 114
           VSGIGFLGAGVIM++GM++RGLNTAATLW SA +G   G
Sbjct: 70  VSGIGFLGAGVIMREGMNIRGLNTAATLWCSAGIGVLCG 108


>PA4635 [S] COG1285 Uncharacterized membrane protein Pae Pseudomonas
           aeruginosa
          Length = 234

 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/112 (56%), Positives = 77/112 (68%), Gaps = 1/112 (0%)

Query: 11  DFIDTLVSLTTAFVLGTLIGAERQYRQRTAGLRTNVLVAVGAAAFVDLAMHLAGADG-AV 69
           D+   L+ +  A VLG LIGAERQ RQR  GLRTN LV+ GA  FV +   + G  G A 
Sbjct: 2   DWKVFLLRVAVALVLGALIGAERQLRQRLTGLRTNALVSTGACLFVLMTQGVPGLAGDAS 61

Query: 70  RVIAYVVSGIGFLGAGVIMKQGMDVRGLNTAATLWASAAVGSCAGADLVAQA 121
           R+ AYVVSGIGFLG GVIM+ G++VRGLNTAATLW +AA+G      L+ +A
Sbjct: 62  RIAAYVVSGIGFLGGGVIMRDGLNVRGLNTAATLWCTAAIGVLCSMGLLLEA 113