BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0165.0014.p         (124 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc02979 [R] COG2319 FOG Sme Sinorhizobium meliloti                   134   6e-32
AGl735 [R] COG2319 FOG Atu Agrobacterium tumefaciens strain C58 ...   132   2e-31
mll5154 [R] COG2319 FOG Mlo Mesorhizobium loti                        132   2e-31
BMEII0307 [R] COG2319 FOG Bme Brucella melitensis                     125   3e-29
CC0323 Non COG                                                         75   3e-14

>SMc02979 [R] COG2319 FOG Sme Sinorhizobium meliloti
          Length = 329

 Score =  134 bits (336), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 64/125 (51%), Positives = 82/125 (65%), Gaps = 1/125 (0%)

Query: 1   MRMSGYPGRVRSMSWSVGGKGLATSGADTVIVWPFTSKDGPMGKEPAMLAPMPA-RVAVV 59
           MRM+GYP +V+S+SWS  GK LA+SGA   IVWPF  KDGPMGK P  L       V  V
Sbjct: 203 MRMTGYPAKVKSLSWSAKGKWLASSGAPAAIVWPFQGKDGPMGKAPLELGTRANIMVTTV 262

Query: 60  ACHPKNDIMAVGYADGTVLMVRLEDGAEILVRRNAGTAVSALGWNAKGTLLAFGTEDGDA 119
           ACHP +DI+A+GY DG +L  R  D  E+L+RR    A++A+ WN  G  LAFG+  GD 
Sbjct: 263 ACHPADDIVAIGYEDGMILAARFADSKEVLLRRPGNGAITAMAWNKSGRQLAFGSAAGDC 322

Query: 120 GIAEM 124
           G+ ++
Sbjct: 323 GVVDI 327


>AGl735 [R] COG2319 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 330

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 87/125 (69%), Gaps = 1/125 (0%)

Query: 1   MRMSGYPGRVRSMSWSVGGKGLATSGADTVIVWPFTSKDGPMGKEPAMLAPMPARVAV-V 59
           MRM+GYP +V+S+SWSV GK LA+SGA   IVWPF+ KDGPMGK P  L      +A  V
Sbjct: 204 MRMTGYPAKVKSISWSVKGKWLASSGAPAAIVWPFSGKDGPMGKAPEELGSRANIMATNV 263

Query: 60  ACHPKNDIMAVGYADGTVLMVRLEDGAEILVRRNAGTAVSALGWNAKGTLLAFGTEDGDA 119
           A HP  D++A+G+ DG +L VRL DG E L+RR    A++++ W+A G LLAF +E GD 
Sbjct: 264 AFHPVEDVLAIGFIDGMILGVRLADGKEALLRRPGKGAITSMDWSATGNLLAFASEAGDC 323

Query: 120 GIAEM 124
           GI ++
Sbjct: 324 GIIDI 328


>mll5154 [R] COG2319 FOG Mlo Mesorhizobium loti
          Length = 324

 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 62/125 (49%), Positives = 84/125 (67%), Gaps = 1/125 (0%)

Query: 1   MRMSGYPGRVRSMSWSVGGKGLATSGADTVIVWPFTSKDGPMGKEPAMLAPM-PARVAVV 59
           MRMSGYPG+V+S+SWSV GK LA+SGA   IVWPF+ KDGPMGK P  L       V  V
Sbjct: 198 MRMSGYPGKVKSLSWSVKGKWLASSGAPAAIVWPFSGKDGPMGKAPLELGTRGNTMVTCV 257

Query: 60  ACHPKNDIMAVGYADGTVLMVRLEDGAEILVRRNAGTAVSALGWNAKGTLLAFGTEDGDA 119
           ACHP  D++A+GY DG V+  R  D  E+L+RR    A++++ W+ +   +AFG+  GD 
Sbjct: 258 ACHPSQDVVAIGYEDGMVIAARFADAKEVLLRRQGKGAITSMMWDKEERRIAFGSAAGDC 317

Query: 120 GIAEM 124
           G+ ++
Sbjct: 318 GVVDI 322


>BMEII0307 [R] COG2319 FOG Bme Brucella melitensis
          Length = 324

 Score =  125 bits (313), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 61/125 (48%), Positives = 79/125 (63%), Gaps = 1/125 (0%)

Query: 1   MRMSGYPGRVRSMSWSVGGKGLATSGADTVIVWPFTSKDGPMGKEPAMLAPM-PARVAVV 59
           MRM+GYP +V+  SWS   K LATSGA   IVWPF  KDGPMGK P  L     + V  V
Sbjct: 198 MRMTGYPAKVKDWSWSAKAKWLATSGAPAAIVWPFAGKDGPMGKAPLELGLRGDSMVTSV 257

Query: 60  ACHPKNDIMAVGYADGTVLMVRLEDGAEILVRRNAGTAVSALGWNAKGTLLAFGTEDGDA 119
           ACHP  DI A+GY DG +L+VR  D  E+L+RR    A++++ W+  G  L FG++ GD 
Sbjct: 258 ACHPGEDIAAIGYNDGMILIVRFADQKEVLLRRPGKGAITSMAWDEDGYRLVFGSQAGDC 317

Query: 120 GIAEM 124
           G+  +
Sbjct: 318 GVVPL 322


>CC0323 Non COG
          Length = 385

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 7/128 (5%)

Query: 1   MRMSGYPGRVRSMSWSVGGKGLATSGADTVIVWPFTSKDGPMGKEPAMLA----PMPARV 56
           MRM GYP +++S+++   G  LAT+GA   ++WPF   +GPMGKE A +      M  RV
Sbjct: 250 MRMGGYPSKIKSVAFFDKGNLLATAGASGAVIWPFAGANGPMGKEAAEIGFSRDSMVVRV 309

Query: 57  AVVACHPKNDIMAVGYADGTVLMVRLEDGAEILVRRNAGTAVSALGWNAKGTLLAFGTED 116
           A +   P   +   G   G +    + +G    ++   G  +SAL  +A G  LA+G E 
Sbjct: 310 AGIDPQP---VCIAGQDSGKIWAAHMRNGRIETLKAEKGAPISALSVSADGKRLAWGDES 366

Query: 117 GDAGIAEM 124
           G+AG+ E+
Sbjct: 367 GEAGVLEI 374