BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0165.0013.p (214 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII0307 [R] COG2319 FOG Bme Brucella melitensis 147 1e-35 mll5154 [R] COG2319 FOG Mlo Mesorhizobium loti 147 2e-35 SMc02979 [R] COG2319 FOG Sme Sinorhizobium meliloti 146 4e-35 AGl735 [R] COG2319 FOG Atu Agrobacterium tumefaciens strain C58 ... 138 1e-32 CC0323 Non COG 122 4e-28 >BMEII0307 [R] COG2319 FOG Bme Brucella melitensis Length = 324 Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 89/192 (46%), Positives = 116/192 (60%), Gaps = 4/192 (2%) Query: 21 VKPLPLGVAVGSVHFLGDRAFFVGAEEGVAIATADGEITRTETHFGAILCA-ASDGKRLV 79 V P L F+G FF A+ G DG T T H G + A A DGK LV Sbjct: 4 VAPFDLEGHCLYARFIGGIPFFAMAD-GAVHRLDDGHQTST-VHDGLLSAAMAVDGKSLV 61 Query: 80 TGGDDGKLIAIDAKGETSVIATDAKRRWIDNVALHSDGTVAWSAGKTAFVRNPKGEEKTF 139 TGG+DG++ IDAKG + +A + R+WI VA +GTV +++GKTA+ R G+ + F Sbjct: 62 TGGEDGRVCRIDAKGVVTELA-NIPRKWITAVATGPNGTVGFASGKTAWSRAADGKVQEF 120 Query: 140 EVPSTVGGLAFAPKGLRLAIAHYNGVTLWFPNMAANPEFLEWAGSHLAVMFSPDNKFLVT 199 +V G+AFAPKG RLAIA YNG TL + AA P LEW G+H+ + FSPD +FL+T Sbjct: 121 TQERSVEGIAFAPKGQRLAIARYNGATLIWAGTAAKPVELEWKGAHIGITFSPDGRFLIT 180 Query: 200 AMHEPAMHGWRL 211 +M E A+HGWRL Sbjct: 181 SMQENALHGWRL 192 >mll5154 [R] COG2319 FOG Mlo Mesorhizobium loti Length = 324 Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/205 (44%), Positives = 117/205 (57%), Gaps = 24/205 (11%) Query: 21 VKPLPL-GVAVGSVHFLGDRAFFVGAEEGVAIATADGEITRTETHFGAILCAASDG---- 75 V PL L G V +V FLGD F A ADG I R + G A+DG Sbjct: 4 VAPLDLEGHCVAAV-FLGDVPHF---------ALADGAIHRLDN--GHKTVQANDGLLAA 51 Query: 76 ------KRLVTGGDDGKLIAIDAKGETSVIATDAKRRWIDNVALHSDGTVAWSAGKTAFV 129 RL+TGG+DGK+ A+ A GE + +A +A ++WI +VA G +A++ GKTAFV Sbjct: 52 FHDSANDRLITGGEDGKVFAVKAGGEAAEVA-NAGKKWITSVAAGPQGAIAYATGKTAFV 110 Query: 130 RNPKGEEKTFEVPSTVGGLAFAPKGLRLAIAHYNGVTLWFPNMAANPEFLEWAGSHLAVM 189 R + + F P +V GLAF+PKG+R +A YNG TL FP P LEWAG+H + Sbjct: 111 RFADDKTREFAHPRSVEGLAFSPKGMRFGVARYNGATLHFPAAEGKPVELEWAGAHTGIT 170 Query: 190 FSPDNKFLVTAMHEPAMHGWRLXCG 214 FSPD FLVT M E A+HGW+L G Sbjct: 171 FSPDGAFLVTTMQENALHGWKLADG 195 >SMc02979 [R] COG2319 FOG Sme Sinorhizobium meliloti Length = 329 Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 89/192 (46%), Positives = 110/192 (57%), Gaps = 4/192 (2%) Query: 21 VKPLPLGVAVGSVHFLGDRAFFVGAEEGVAIATADGEITRTETHFGAILCAASDGK-RLV 79 V PL L V V FL D FF GA I D TE H G + + L+ Sbjct: 4 VAPLDLEGHVVGVAFLKDVPFFAGAAG--TIHRLDHGHKTTEAHDGLLSFVVDEANDTLL 61 Query: 80 TGGDDGKLIAIDAKGETSVIATDAKRRWIDNVALHSDGTVAWSAGKTAFVRNPKGEEKTF 139 TGG+DGK++ I A G S++A D R+WI VA G VA++ GKT VR G + F Sbjct: 62 TGGEDGKVMRISADGTASLVA-DTGRKWISQVAAGPQGAVAYAYGKTTHVRLSDGTTREF 120 Query: 140 EVPSTVGGLAFAPKGLRLAIAHYNGVTLWFPNMAANPEFLEWAGSHLAVMFSPDNKFLVT 199 TV G+AFAPKGLR+A A YNGV+L + MA P LEW G+H V FSPD +F+VT Sbjct: 121 PEQRTVEGIAFAPKGLRIAAARYNGVSLHWVAMAGQPVDLEWKGAHTGVTFSPDGRFVVT 180 Query: 200 AMHEPAMHGWRL 211 AM E A+HGW+L Sbjct: 181 AMQENALHGWKL 192 >AGl735 [R] COG2319 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 330 Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/192 (43%), Positives = 108/192 (56%), Gaps = 4/192 (2%) Query: 21 VKPLPLGVAVGSVHFLGDRAFFVGAEEGVAIATADGEITRTETHFGAILCAASD-GKRLV 79 V PL + V S HFLGD F A I DG TE H G + C L+ Sbjct: 4 VAPLDIEGHVVSTHFLGDIPLF--ATAAGTIHRLDGGEKVTEAHDGLLTCIRDPYSATLL 61 Query: 80 TGGDDGKLIAIDAKGETSVIATDAKRRWIDNVALHSDGTVAWSAGKTAFVRNPKGEEKTF 139 +GG+DG+++ I G S IA + R+W+ VA VA+ GK++FVR K F Sbjct: 62 SGGEDGRVLRIGHDGSISEIA-NVPRKWVGVVAGGPQKAVAYGVGKSSFVRLSDCTVKEF 120 Query: 140 EVPSTVGGLAFAPKGLRLAIAHYNGVTLWFPNMAANPEFLEWAGSHLAVMFSPDNKFLVT 199 + TV +AFAPKGLR+A+A YNGVTL + A +P LEW G+H V FSPD KFLVT Sbjct: 121 KEERTVEAIAFAPKGLRIAVARYNGVTLHWVATAGDPVDLEWKGAHTGVTFSPDGKFLVT 180 Query: 200 AMHEPAMHGWRL 211 M E A+HGW++ Sbjct: 181 TMQENALHGWKM 192 >CC0323 Non COG Length = 385 Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 78/188 (41%), Positives = 108/188 (57%), Gaps = 13/188 (6%) Query: 39 RAFFVGAEEGVAIATADGEITRTETHFG----AILCAA--SDGKRLVTGGDDGKLI--AI 90 RA F + V + T +G +T E H G A+L AA G +VTGGDDG+++ I Sbjct: 61 RAMFALGDGTVRLQTDEGFVT-VEAHGGPLGGAVLAAAVHPSGAGIVTGGDDGRVVWSRI 119 Query: 91 DAKGETSVIATDAKRRWIDNVALHS-DGTVAWSAGKTAFVRNPKGEE--KTFEVPSTVGG 147 + + + + K +WI++VA + G +A++ GK VR+ +TF TV G Sbjct: 120 EGGEVVATLIAEVKNKWIEHVAASAASGLIAFTVGKEVHVRDAADPAFARTFPHEKTVSG 179 Query: 148 LAFAPKGLRLAIAHYNGVTLWFPNMA-ANPEFLEWAGSHLAVMFSPDNKFLVTAMHEPAM 206 LAF PKG RLA A Y G LW+ +A P L+WAGSH+AV FSPD KFL+++M E + Sbjct: 180 LAFEPKGRRLASATYGGAYLWYARIADQKPTVLKWAGSHIAVEFSPDGKFLISSMQENQL 239 Query: 207 HGWRLXCG 214 HGWRL G Sbjct: 240 HGWRLSDG 247