BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0164.0001.p (224 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SA1437 [E] COG2049 Allophanate hydrolase subunit 1 Sau Staphyloc... 153 2e-37 PH0987 [E] COG2049 Allophanate hydrolase subunit 1 Pho Pyrococcu... 145 6e-35 BS_ycsJ_1 [E] COG2049 Allophanate hydrolase subunit 1 Bsu Bacill... 145 6e-35 PAB1713 [E] COG2049 Allophanate hydrolase subunit 1 Pab Pyrococc... 143 3e-34 BH1817 [E] COG2049 Allophanate hydrolase subunit 1 Bha Bacillus ... 142 5e-34 >SA1437 [E] COG2049 Allophanate hydrolase subunit 1 Sau Staphylococcus aureus N315 Length = 244 Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 79/220 (35%), Positives = 122/220 (55%), Gaps = 3/220 (1%) Query: 1 VEFSRTIDDAANRRVLALDRVIAAEPIAGITETVPTYRSLLVHYDPVQISFDAL--GAQL 58 + F I + R V A+ R I + I I + VP+YR++L+++D I+ L +L Sbjct: 13 IYFENKISEETYRNVTAMVRWIREKEILEIQDIVPSYRAVLIYFDEQAITSSKLIENLEL 72 Query: 59 LARAAKAPPSETGTRRW-RIPVTYGGEHGIDLEDVAKALQTTPDQIVARHVAGDYRVAMI 117 K + T R +IPV YGG +G D+E+VAK + T +Q++ +H + Y + M+ Sbjct: 73 NKFNEKNVHAVNQTNRIIKIPVQYGGTYGPDIEEVAKHNRITVEQVIEKHTSKPYLIYML 132 Query: 118 GFTPGWSYLSGLERFLHMPRRKDPRLLTPAGTISIGGIQTGVQCLAGPSGWHLLGRTPVR 177 GF PG+ YL GL+ LH PRR PRL AG++ I QTG+ P GW ++GRTP++ Sbjct: 133 GFMPGFPYLGGLDEQLHTPRRNQPRLKIHAGSVGIANNQTGLYPSDSPGGWQIIGRTPLK 192 Query: 178 TYQLHRDPTFLLEPGDAITFTAVDAKTFAEQDRAAEAGEF 217 + R+P + E G+ I F A+D + F + +R G F Sbjct: 193 VFSSEREPMSMYEAGEWIQFYAIDEQKFIQIERDISDGNF 232 >PH0987 [E] COG2049 Allophanate hydrolase subunit 1 Pho Pyrococcus horikoshii Length = 225 Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 115/207 (55%), Gaps = 1/207 (0%) Query: 1 VEFSRTIDDAANRRVLALDRVIAAEPIAGITETVPTYRSLLVHYDPVQISFDALGAQLLA 60 + F I + N RV +L + I E + E VP Y SLLV YDP++ S++ + + L Sbjct: 13 ISFGDEISEEINDRVHSLAKAIEKESPEWLVELVPAYSSLLVIYDPLKASYEEVESYLKR 72 Query: 61 RAAKAPPSETGTRRWRIPVTYGGEHGIDLEDVAKALQTTPDQIVARHVAGDYRVAMIGFT 120 +A+ G + IPV YGGE G D+E VA+ + D ++ H YRV +GF Sbjct: 73 ISAREVERIKG-KTIEIPVAYGGEFGPDIEFVAQYNGLSVDDVIEIHSKPLYRVYFLGFL 131 Query: 121 PGWSYLSGLERFLHMPRRKDPRLLTPAGTISIGGIQTGVQCLAGPSGWHLLGRTPVRTYQ 180 PG++YL G++ + PR + PRL PAG++ I G QTG + P GW ++GR P+RT+ Sbjct: 132 PGFAYLGGMDERIATPRLEKPRLKVPAGSVGIAGKQTGWYAIESPGGWRIIGRIPLRTFN 191 Query: 181 LHRDPTFLLEPGDAITFTAVDAKTFAE 207 + P ++ PGD + F +D K F E Sbjct: 192 PGKVPPSIVLPGDYVKFVPIDEKEFWE 218 >BS_ycsJ_1 [E] COG2049 Allophanate hydrolase subunit 1 Bsu Bacillus subtilis Length = 273 Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 117/215 (54%), Gaps = 11/215 (5%) Query: 1 VEFSRTIDDAANRRVLALDRVIAAEPIAGITETVPTYRSLLVHYD--------PVQIS-- 50 + F I++ N V A I +P G E +P + SL V YD P IS Sbjct: 17 IRFGEEINEQVNGIVHAAAAYIEEQPFPGFIECIPAFTSLTVFYDMYEVYKHLPQGISSP 76 Query: 51 FDALGAQLLARAAK-APPSETGTRRWRIPVTYGGEHGIDLEDVAKALQTTPDQIVARHVA 109 F+++ + R A+ A E R IPV YGGE G DLE+VAK Q +P++++ H Sbjct: 77 FESVKRDVEERLAEIAEDYEVNRRIVEIPVCYGGEFGPDLEEVAKINQLSPEEVIDIHTN 136 Query: 110 GDYRVAMIGFTPGWSYLSGLERFLHMPRRKDPRLLTPAGTISIGGIQTGVQCLAGPSGWH 169 G+Y V M+GF PG+ +L G+ + + PR+ PR PAG++ I G+QTGV ++ P GW Sbjct: 137 GEYVVYMLGFAPGFPFLGGMSKRIAAPRKSSPRPSIPAGSVGIAGLQTGVYPISTPGGWQ 196 Query: 170 LLGRTPVRTYQLHRDPTFLLEPGDAITFTAVDAKT 204 L+G+TP+ ++ +P LL GD + F + KT Sbjct: 197 LIGKTPLALFRPQENPPTLLRAGDIVKFVRISEKT 231 >PAB1713 [E] COG2049 Allophanate hydrolase subunit 1 Pab Pyrococcus abyssi Length = 225 Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 114/210 (54%), Gaps = 1/210 (0%) Query: 1 VEFSRTIDDAANRRVLALDRVIAAEPIAGITETVPTYRSLLVHYDPVQISFDALGAQLLA 60 + F I + N RV AL R I + + E VP Y SLLV YDP++ S++ + + Sbjct: 13 ISFGDVISEEINDRVHALARAIERDSPEWLVEVVPAYSSLLVIYDPLKASYEEV-ESYVR 71 Query: 61 RAAKAPPSETGTRRWRIPVTYGGEHGIDLEDVAKALQTTPDQIVARHVAGDYRVAMIGFT 120 R + + + IPV YGGE G D+E VA+ + D ++ H YRV +GF Sbjct: 72 RISTQEVEKIKGKTVEIPVAYGGEFGPDIEFVAEYNGLSVDDVIEIHSKPLYRVYFLGFL 131 Query: 121 PGWSYLSGLERFLHMPRRKDPRLLTPAGTISIGGIQTGVQCLAGPSGWHLLGRTPVRTYQ 180 PG++YL G++ + PR + PR+ PAG++ I G QTG + P GW ++GRTP+RT+ Sbjct: 132 PGFAYLGGMDERIATPRLEKPRVKVPAGSVGIAGKQTGWYAIESPGGWRIIGRTPLRTFN 191 Query: 181 LHRDPTFLLEPGDAITFTAVDAKTFAEQDR 210 + P ++ PGD + F +D F E R Sbjct: 192 PGKVPPSIVLPGDYVKFVPIDEMEFWEIYR 221 >BH1817 [E] COG2049 Allophanate hydrolase subunit 1 Bha Bacillus halodurans Length = 225 Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 121/215 (56%), Gaps = 10/215 (4%) Query: 1 VEFSRTIDDAANRRVLALDRVIAAEPIAGITETVPTYRSLLVHYDPVQIS----FDALGA 56 V+F + I R+V A ++ EP G+ E VP+Y S+ V+YD ++I+ Sbjct: 3 VQFGKEIGPHVQRKVDAFMTLLETEPFLGMLECVPSYTSVAVYYDILKIAPMIDHGTTAF 62 Query: 57 QLLAR--AAKAPPSETGTRRWR----IPVTYGGEHGIDLEDVAKALQTTPDQIVARHVAG 110 Q++ + + K GT + R IPV YGG +G DLE+VA+ Q + +++V H + Sbjct: 63 QVVRKLVSEKLEQMNEGTVKERNVIEIPVCYGGSYGPDLEEVAQHNQLSLEEVVNIHASK 122 Query: 111 DYRVAMIGFTPGWSYLSGLERFLHMPRRKDPRLLTPAGTISIGGIQTGVQCLAGPSGWHL 170 +Y V MIGF PG+ YL G+ + + PRRK+PR L PAG++ I G QTGV + P GW + Sbjct: 123 EYLVYMIGFAPGFPYLGGMPKRIAAPRRKEPRTLIPAGSVGIAGEQTGVYSIDTPGGWQI 182 Query: 171 LGRTPVRTYQLHRDPTFLLEPGDAITFTAVDAKTF 205 +G+TP+ ++ LL+ GD + F + K F Sbjct: 183 IGKTPLSLFRPTAKHPSLLQAGDFVRFQPITEKEF 217