BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0163.0004.p (308 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc02241 [R] COG4976 Predicted methyltransferase (contains TPR r... 179 7e-45 AGc866 [R] COG4976 Predicted methyltransferase (contains TPR rep... 161 2e-39 mlr5485 [R] COG4976 Predicted methyltransferase (contains TPR re... 142 7e-34 AGc3455 [R] COG4976 Predicted methyltransferase (contains TPR re... 139 7e-33 BMEI0923 [R] COG4976 Predicted methyltransferase (contains TPR r... 131 2e-30 >SMc02241 [R] COG4976 Predicted methyltransferase (contains TPR repeat) Sme Sinorhizobium meliloti Length = 312 Score = 179 bits (454), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 117/309 (37%), Positives = 162/309 (52%), Gaps = 12/309 (3%) Query: 7 LSSGDLVADRRYEFARDLQLKGDLPAAAELLEQAIELVPKFPSAWYTLGKIRLELGQREA 66 LSSGDL+ADRR ++A+ L GD P AAEL+ QA+EL P + + W+ L + G+ EA Sbjct: 6 LSSGDLIADRRADYAKMLAEAGDAPGAAELMAQALELAPDWAAGWFRLADYEEKSGRIEA 65 Query: 67 AIAAFRDARDADPEDRHGAGLHLMQLGVEAVSAMPPG-YVQTLFDQYAPRFEAALVGDLG 125 A+ A R+ +PED GA L L LG PP YV+ LFD YA RF+ ALV LG Sbjct: 66 AVDALRNTLRLNPEDIFGASLKLALLGATETPEQPPSVYVERLFDDYAERFDHALVEKLG 125 Query: 126 YRGPALLFKAVLSVRAGAKQPAFFKRAIDLGCGTGLAAGAFARHVDRFIGIDLSPRMIDK 185 Y P L + V G + F+ DLGCGTGL D G DLS M+ K Sbjct: 126 YSVPEKLAAVIGRVNGGGR----FRHVTDLGCGTGLFGERIRDRADFLEGFDLSANMLAK 181 Query: 186 AHATGLYAELEVDDMLKA------ISARREASAELILAADAMVYVADLAPVLAEANRVLV 239 A A G+Y L D+ A A + A+L+ AAD ++Y+ +L V A+R+L Sbjct: 182 AEAKGVYDRLAQADLSLAPEDSGVFGALEQRRADLVSAADVLMYLGNLEGVFVIADRLLA 241 Query: 240 AGGVLAFTTETHDGED-VIIGEGLRYAHSAAYVRASVAAAGLTLALLDDLSARNEDNIPA 298 GG+ AF+ E G D ++ LRYAH A + + +GL++ + R + P Sbjct: 242 PGGLFAFSVEDACGADGFVLRPSLRYAHPEASIASLCKESGLSMIATERTIIRRDAGEPV 301 Query: 299 PGLVAVAVK 307 G++ +A K Sbjct: 302 AGILFLACK 310 >AGc866 [R] COG4976 Predicted methyltransferase (contains TPR repeat) Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 314 Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 113/318 (35%), Positives = 159/318 (50%), Gaps = 22/318 (6%) Query: 1 MAPRLFLSSGDLVADRRYEFARDLQLKGDLPAAAELLEQAIELVPKFPSAWYTLGKIRLE 60 MAP F SSGD++ADRR ++AR L GD PAAAEL+EQA+EL P++ + W+ G+ + Sbjct: 2 MAPNQF-SSGDVIADRRADYARMLAESGDYPAAAELMEQALELAPRWTAGWFRFGEYHEK 60 Query: 61 LGQREAAIAAFRDARDADPEDRHGAGLHLMQLGVEAVSAMPPG-YVQTLFDQYAPRFEAA 119 G+ A+AA+ + D E A L L LG PP YV+ LFD YA RFE + Sbjct: 61 AGETAKAVAAYEKVAELDAEGLFAAELKLAVLGAAETPEQPPSRYVEGLFDDYADRFETS 120 Query: 120 LVGDLGYRGPALLFKAVLSVRAGAKQPAFFKRAIDLGCGTGLAAGAFARHVDRFIGIDLS 179 LV L Y P L + + G F +D+GCGTGL R G D+S Sbjct: 121 LVEKLDYSVPQKLAELIGKAATGDA----FDTIVDIGCGTGLLGIEIRSLAKRLEGFDIS 176 Query: 180 PRMIDKAHATGLYAELEVDDMLKAISARREAS-----------AELILAADAMVYVADLA 228 M+ KA LY L D+ S EAS A+L+ AAD M+Y+ L Sbjct: 177 QNMLAKADEKSLYDHLGQADL----SLDAEASGLFTPVLTQHRADLVAAADVMMYLGSLE 232 Query: 229 PVLAEANRVLVAGGVLAFTTE-THDGEDVIIGEGLRYAHSAAYVRASVAAAGLTLALLDD 287 V+ + +L G AF+ E D + ++ E LRYAHS +YV + +G + + Sbjct: 233 TVMPLVSALLKPSGFFAFSVEDAGDEQGFVLRESLRYAHSKSYVIDLLERSGFSPMEIRK 292 Query: 288 LSARNEDNIPAPGLVAVA 305 + R + P G++ +A Sbjct: 293 TTIRKDAGKPLSGILFLA 310 >mlr5485 [R] COG4976 Predicted methyltransferase (contains TPR repeat) Mlo Mesorhizobium loti Length = 284 Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 96/265 (36%), Positives = 138/265 (52%), Gaps = 9/265 (3%) Query: 45 PKFPSAWYTLGKIRLELGQREAAIAAFRDARDADPEDRHGAGLHLMQLG-VEAVSAMPPG 103 P++ W+ LG+++ G+ + A A+ + DP DR GA L L +G +A P Sbjct: 23 PQWAMGWFRLGEMQEASGKLDLAAQAWTTSLKLDPADRQGAALKLQLIGKAPVAAAPPSA 82 Query: 104 YVQTLFDQYAPRFEAALVGDLGYRGPALLFKAVLSVRAGAKQPAFFKRAIDLGCGTGLAA 163 +V+ LFD YA FE LVG L YR P L + + R P F+ A+DLGCGTGL Sbjct: 83 FVEALFDHYAETFEEMLVGKLDYRLPEFLEQMIRKAR-----PGRFRLALDLGCGTGLMG 137 Query: 164 GAFARHVDRFIGIDLSPRMIDKAHATGLYAELEVDDMLKAISARREASAELILAADAMVY 223 VDR G+D+S RM+ KA A G+Y L D L+ S E +L+ +AD ++Y Sbjct: 138 ERLRPLVDRLEGVDISARMLKKARAKGIYDTLTKAD-LQGFSHSGE-KPDLVTSADVLIY 195 Query: 224 VADLAPVLAEANRVLVAGGVLAFTTETHDGE-DVIIGEGLRYAHSAAYVRASVAAAGLTL 282 + L ++ +L GG+ AF+ ET G+ D + RYAHS YV ++ A GL + Sbjct: 196 IGALDGLVGTVAGLLAEGGLFAFSIETLAGDGDFALQPSRRYAHSQPYVGRTLEAKGLAI 255 Query: 283 ALLDDLSARNEDNIPAPGLVAVAVK 307 L+ + R + P GL VA K Sbjct: 256 LALEPTTIRQDRREPVKGLGVVAWK 280 >AGc3455 [R] COG4976 Predicted methyltransferase (contains TPR repeat) Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 274 Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 87/250 (34%), Positives = 130/250 (52%), Gaps = 11/250 (4%) Query: 62 GQREAAIAAFRDARDADPEDRHGAGLHLMQLGV-EAVSAMPPGYVQTLFDQYAPRFEAAL 120 G +AA+ A+ + DP+D GA + + +G E S P YV+TLFDQ+A FE L Sbjct: 26 GDVDAAVKAYEEVLAIDPDDHGGAAVRIAAMGRGEQPSKAPDAYVETLFDQHAEAFEDIL 85 Query: 121 VGDLGYRGPALLFKAVLSVRAGAKQPAFFKRAIDLGCGTGLAAGAFARHVDRFIGIDLSP 180 V LGY P ++ + + ++ G FKR +DLGCGTGL A D GID+S Sbjct: 86 VEQLGYAVPMMVRQRLQTLNLGP-----FKRLLDLGCGTGLTGEALRDMADDITGIDISE 140 Query: 181 RMIDKAHATGLYAELEVDDMLKAISARREASAELILAADAMVYVADLAPVLAEANRVLVA 240 M++ AH LY L V + + + ++I A D + Y+ L P+ A L A Sbjct: 141 NMVEIAHEKDLYETLYVAEAEDFLEDNDDEPFDIITATDVLPYLGALEPLFFGAAENLNA 200 Query: 241 GGVLAFTTET-----HDGEDVIIGEGLRYAHSAAYVRASVAAAGLTLALLDDLSARNEDN 295 GG+L F++ET G ++G R+AH+ YVR +AA G + + D++ R +D Sbjct: 201 GGLLIFSSETLPADIMAGRPYMVGPHQRFAHAETYVRDRLAATGFEVVEVTDINVRMQDG 260 Query: 296 IPAPGLVAVA 305 P PG + +A Sbjct: 261 NPTPGHLVIA 270 >BMEI0923 [R] COG4976 Predicted methyltransferase (contains TPR repeat) Bme Brucella melitensis Length = 276 Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 86/251 (34%), Positives = 133/251 (52%), Gaps = 12/251 (4%) Query: 62 GQREAAIAAFRDARDADPEDRHGAGLHLMQLGVEAVS-AMPPGYVQTLFDQYAPRFEAAL 120 G +AA A+ + DP+D GA + L +G AV P YV TLFDQ+A F+ L Sbjct: 28 GDFDAAAKAYEEVLQIDPDDHGGAAVRLASMGRGAVPLKAPDAYVATLFDQHAEMFDTIL 87 Query: 121 VGDLGYRGPALLFKAVLSVRAGAKQPAFF-KRAIDLGCGTGLAAGAFARHVDRFIGIDLS 179 V LGY P L + +L + AF +R +DLGCGTGL+A A G+D+S Sbjct: 88 VDQLGYDVPLQLREMLLEM-----DDAFNAERMLDLGCGTGLSADALDDMAAHKTGVDIS 142 Query: 180 PRMIDKAHATGLYAELEVDDMLKAISARREASAELILAADAMVYVADLAPVLAEANRVLV 239 MI+ A+ G Y L V + ++ + + E + +LI+A D + Y+ +L A L Sbjct: 143 ENMIEVAYEKGDYDALFVGEAVRFLESTEEENWDLIVATDVLPYMGELERFFAGVAEHLN 202 Query: 240 AGGVLAFTTETHD-----GEDVIIGEGLRYAHSAAYVRASVAAAGLTLALLDDLSARNED 294 +GG F++ET D G ++G+ R+AH+ +YVRA + + G+ +D++ R+E Sbjct: 203 SGGHFGFSSETLDDNRLAGRAFVVGDYQRFAHAQSYVRAMLDSHGMDCIRCEDITVRSEQ 262 Query: 295 NIPAPGLVAVA 305 P PG + +A Sbjct: 263 GAPVPGHLYIA 273