BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0161.0024.p         (133 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC1011 [S] COG3339 Uncharacterized conserved protein Cac Clostr...   111   3e-25
SMb20260 [S] COG3339 Uncharacterized conserved protein Sme Sinor...    99   2e-21
RSc2183 [S] COG3339 Uncharacterized conserved protein Rso Ralsto...    59   2e-09

>CAC1011 [S] COG3339 Uncharacterized conserved protein Cac Clostridium
           acetobutylicum
          Length = 138

 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 58/106 (54%), Positives = 70/106 (66%), Gaps = 2/106 (1%)

Query: 15  NLKRDSVALYLASRDPRVPWYAKALAVAVAAYALSPIDLIPDFIPVIGYLDDLILLPLGI 74
            LKR    LYLA R   VPWYAK +A+ V  Y LSPIDLIPDFIP IGYLDDLI++P+GI
Sbjct: 20  GLKRKLEILYLAYRRKDVPWYAKLIAIVVVGYVLSPIDLIPDFIPFIGYLDDLIIVPIGI 79

Query: 75  WLAISLVPDEVMAECRAKASAVVQ--RPTSRAGMIAIVVLWIAGAA 118
            LAI L+P EV  EC  +A  V +  +P S    + I++ WI  AA
Sbjct: 80  SLAIRLIPKEVFYECSKEAEEVFKEGKPKSWFFGVLIIIFWIVVAA 125


>SMb20260 [S] COG3339 Uncharacterized conserved protein Sme Sinorhizobium
           meliloti
          Length = 130

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/105 (60%), Positives = 83/105 (79%)

Query: 6   LSSIKVWARNLKRDSVALYLASRDPRVPWYAKALAVAVAAYALSPIDLIPDFIPVIGYLD 65
           L   + WAR ++RD V L+LA+RD RVPWYAK  A AVAAYALSPIDLIPDFIPV+GYLD
Sbjct: 4   LDRARRWARGIRRDVVVLWLAARDRRVPWYAKLAAGAVAAYALSPIDLIPDFIPVLGYLD 63

Query: 66  DLILLPLGIWLAISLVPDEVMAECRAKASAVVQRPTSRAGMIAIV 110
           DLI++P+GI + + L+P +V+A+ RA A    +RP SRAG++A++
Sbjct: 64  DLIIVPVGIIVVLKLIPVDVLADLRAAAMKHTERPVSRAGLVAVI 108


>RSc2183 [S] COG3339 Uncharacterized conserved protein Rso Ralstonia
           solanacearum
          Length = 98

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%)

Query: 16  LKRDSVALYLASRDPRVPWYAKALAVAVAAYALSPIDLIPDFIPVIGYLDDLILLPLGIW 75
           ++ D   L+ A R P  PW+    A+ +A Y +SP+DLIPD IPVIG++DD++L+PL + 
Sbjct: 12  VRNDVRLLWFALRHPEAPWWLTPAALLLAGYVVSPVDLIPDVIPVIGWVDDIVLVPLALH 71

Query: 76  LAISLVPDEVMAECRAKASAVVQRPTSR 103
             +  +P+ V  E R  A+  V RP+ R
Sbjct: 72  ALLRALPERVREEARFAAARRV-RPSGR 98