BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0161.0003.p         (132 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMb20182 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate tran...    80   2e-15

>SMb20182 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport
           system, permease component Sme Sinorhizobium meliloti
          Length = 259

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 47/69 (68%), Gaps = 2/69 (2%)

Query: 1   VLAYIWAGLTEVAAIAAIAINKLPTAVVTLREGARALDPALDEMATAFSF-PRGRAFRHV 59
           VL YIW GL E AAI A+ +NK+P     LREGARALDP LD MA  +   P  R  RHV
Sbjct: 117 VLCYIWIGLNETAAITAVVLNKIPNVATLLREGARALDPDLDSMAAVYRMRPLAR-LRHV 175

Query: 60  ILPQLAPYI 68
           I+PQLAP+I
Sbjct: 176 IMPQLAPFI 184