BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0158.0011.p         (99 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA1037 [S] COG2860 Predicted membrane protein Pae Pseudomonas ae...    91   7e-19
HI1240 [S] COG2860 Predicted membrane protein Hin Haemophilus in...    86   2e-17
PM0935 [S] COG2860 Predicted membrane protein Pmu Pasteurella mu...    78   5e-15
Cj0593c [S] COG2860 Predicted membrane protein Cje Campylobacter...    63   2e-10
VC2382 [S] COG2860 Predicted membrane protein Vch Vibrio cholerae      62   3e-10

>PA1037 [S] COG2860 Predicted membrane protein Pae Pseudomonas aeruginosa
          Length = 206

 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 65/97 (67%)

Query: 1   VASQVDVPLPIVIVAGMISGCAGGVLRDILCNEVPLLFRSELYASVSVVTGLFYVAGSGL 60
           V+ ++   L I  ++G+I+G  GG+LRDILCN+VPL+FR ELYASVS  +   Y+    L
Sbjct: 107 VSLEMGHSLLIAAISGVITGVFGGILRDILCNDVPLIFRRELYASVSFASAWCYLICVEL 166

Query: 61  QVNAQLWTALTFALGLTFRMLAIRYRWEMPKFVFNGE 97
           ++ ++    +T   G  FR+LAIR+ WEMPKFV+  +
Sbjct: 167 ELPSEQAMLITLFSGFLFRLLAIRFHWEMPKFVYQDD 203


>HI1240 [S] COG2860 Predicted membrane protein Hin Haemophilus influenzae
          Length = 220

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 61/98 (62%), Gaps = 2/98 (2%)

Query: 1   VASQVDVPLPIVIVAGMISGCAGGVLRDILCNEVPLLFRSELYASVSVVTGLFYVAGSGL 60
           +A  +   L IV +AG I+G  GGVLRD+LCN +PL+F+ ELYAS+++   L Y A S L
Sbjct: 111 IAMDMGHSLTIVCIAGCITGAFGGVLRDMLCNRIPLVFQKELYASIALFATLTYYALSTL 170

Query: 61  QVNAQLWTALTFALGLTFRMLAIRYRWEMPKFVFNGEE 98
           QV   L   LT     T R+LAI + W +P  VFN +E
Sbjct: 171 QVEHTLAVLLTLINSFTLRLLAIHFEWGLP--VFNYQE 206


>PM0935 [S] COG2860 Predicted membrane protein Pmu Pasteurella multocida
          Length = 226

 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 58/98 (59%)

Query: 1   VASQVDVPLPIVIVAGMISGCAGGVLRDILCNEVPLLFRSELYASVSVVTGLFYVAGSGL 60
           VA  +     I ++A +I+G  GGVLRD+LCN +PL+F+ ELYAS++++    Y+    L
Sbjct: 111 VALDMGYGFTIAVIAAIITGAFGGVLRDLLCNRIPLVFQKELYASIALIATAIYIGLQQL 170

Query: 61  QVNAQLWTALTFALGLTFRMLAIRYRWEMPKFVFNGEE 98
            ++  L   +T   G   R+LAI + W +P F +  +E
Sbjct: 171 NIDHNLVIIITLISGFIARLLAIYFEWGLPVFDYQEQE 208


>Cj0593c [S] COG2860 Predicted membrane protein Cje Campylobacter jejuni
          Length = 210

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 61/89 (68%), Gaps = 1/89 (1%)

Query: 11  IVIVAGMISGCAGGVLRDILCNEVPLLFRSELYASVSVVTGLFYVA-GSGLQVNAQLWTA 69
           I + A +I+G  GG+LRDILC  +PL+F+ E+YA ++++ G  Y +    L++NA + T 
Sbjct: 122 IAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAIIAGAIYYSLIIWLELNALVCTL 181

Query: 70  LTFALGLTFRMLAIRYRWEMPKFVFNGEE 98
           LT  +G+  R+LAI+Y+W +P F +N E+
Sbjct: 182 LTLFIGVFARLLAIKYQWSLPIFSYNEEK 210


>VC2382 [S] COG2860 Predicted membrane protein Vch Vibrio cholerae
          Length = 239

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 4/87 (4%)

Query: 11  IVIVAGMISGCAGGVLRDILCNEVPLLFRSELYASVSVVTGLFYVAGSGLQVNAQLWTAL 70
           I I+ G+I+GC GG++RD+L  E+P++ RSE+YA+  ++ G+F+     +  ++   TAL
Sbjct: 154 IAIIMGVITGCGGGIIRDVLAREIPMVLRSEVYATACIIGGIFHTTALAMGYSSS--TAL 211

Query: 71  TFAL--GLTFRMLAIRYRWEMPKFVFN 95
              +   L  R+ AIR+   +P F   
Sbjct: 212 LSGVFSTLLIRLGAIRWHLSLPTFALT 238