BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0157.0006.p         (239 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll0820 [L] COG2818 3-methyladenine DNA glycosylase Mlo Mesorhiz...   285   7e-77
PA1193 [L] COG2818 3-methyladenine DNA glycosylase Pae Pseudomon...   177   2e-44

>mll0820 [L] COG2818 3-methyladenine DNA glycosylase Mlo Mesorhizobium loti
          Length = 238

 Score =  285 bits (728), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 137/238 (57%), Positives = 166/238 (69%)

Query: 1   VTSFKVIRSRAEKRKGGPKALEKLLRPPAGAKALAKLGDDRVLAEMTRRVFCAGFAWSVI 60
           +  F+ IR RA KRKGG   L  LL P     A+A + DDR+L+ M  R+F AGF W VI
Sbjct: 1   MADFQKIRLRAAKRKGGEAELATLLGPVPDNAAVADIPDDRILSTMAERIFAAGFVWRVI 60

Query: 61  DAKWPGFEEAFLGFQPAKLAFKPDEFWEKLVSDARIVRNGAKIMSVRDNGRFVQEIAREH 120
           + KWPGFEEAFL F+P +L F+PD+FW  L SD RIVRN  KI SVRDN  FV+ +++EH
Sbjct: 61  EQKWPGFEEAFLRFEPKRLLFQPDDFWHDLTSDQRIVRNPQKIKSVRDNAAFVERVSKEH 120

Query: 121 GSFGKFLGAWPSSDEVGLLELLAKRGSRLGGNTGQMLLRFLGWDGFVTSRDVVACLRDAG 180
           G FG+FL  WP+ D+VGL+  L K GSRLGGNTGQ  LR+LGWD FV S D+ A L DAG
Sbjct: 121 GGFGEFLANWPAGDQVGLMAYLGKHGSRLGGNTGQYFLRWLGWDAFVISADMAAALCDAG 180

Query: 181 LDIAEEVKSKRDLAKVQAQFNAWAEETGLSYLHLSRICAMSIGENHTPEEIIERTRSD 238
           LDIAE   SK+DL K+QAQ N W  +TGL   H+SRI AMSIGENH+P+ + E    D
Sbjct: 181 LDIAESPTSKKDLDKIQAQINQWVADTGLPRRHISRILAMSIGENHSPQSLREYMGDD 238


>PA1193 [L] COG2818 3-methyladenine DNA glycosylase Pae Pseudomonas
           aeruginosa
          Length = 223

 Score =  177 bits (449), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/214 (45%), Positives = 131/214 (61%), Gaps = 3/214 (1%)

Query: 13  KRKGGPKALEKLLRPPAGAKALAKLGDDRVLAEMTRRVFCAGFAWSVIDAKWPGFEEAFL 72
            R G  +ALE  L  P  A  L  +GDDR L+ ++ R+F AG   S++DAKWP FEE F 
Sbjct: 13  NRFGSREALEARLPQPKSAAELRAVGDDRYLSLISLRIFRAGLKHSLVDAKWPAFEEVFF 72

Query: 73  GFQPAKLAFKPDEFWEKLVSDARIVRNGAKIMSVRDNGRFVQEIAREHGSFGKFLGAWPS 132
           GF P K+     E  E+L+ DAR++R+  K+ SV  N + V ++AREHGSFG FL  WP 
Sbjct: 73  GFDPQKVVLMSAEHLERLMQDARLIRHLGKLKSVPRNAQMVLDLAREHGSFGNFLADWPE 132

Query: 133 SDEVGLLELLAKRGSRLGGNTGQMLLRFLGWDGFVTSRDVVACLRDAGLDIAEEVKSKRD 192
           +D VGL +LL+KRG++LGG +    LR  G D F+ S D+VA L+   + I +   S +D
Sbjct: 133 TDIVGLWKLLSKRGNQLGGLSAPRFLRMAGKDTFIPSDDMVAALKAQEI-IDKPPTSLKD 191

Query: 193 LAKVQAQFNAWAEETGLSYLHLSRICAMSIGENH 226
           LA VQA FN W EE+G     LS + A ++  NH
Sbjct: 192 LAAVQAAFNQWREESGRPLCQLSVMLAHTV--NH 223