BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0069.p (397 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMb21182 [C] COG1804 Predicted acyl-CoA transferases/carnitine d... 227 3e-59 BMEI0898 [C] COG1804 Predicted acyl-CoA transferases/carnitine d... 224 3e-58 TVN1161 [C] COG1804 Predicted acyl-CoA transferases/carnitine de... 223 4e-58 BMEII0224 [C] COG1804 Predicted acyl-CoA transferases/carnitine ... 223 5e-58 PA0446 [C] COG1804 Predicted acyl-CoA transferases/carnitine deh... 219 1e-56 >SMb21182 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase Sme Sinorhizobium meliloti Length = 394 Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 141/393 (35%), Positives = 209/393 (53%), Gaps = 24/393 (6%) Query: 8 APLAGVRVLDFSIMVAGPYCARLLADVGAEVIKIEPPEGDDMRLR-TPLREGH------S 60 APL G+RVL+ + ++AGP+ + LAD+GA+VIK+E P GDD R P G + Sbjct: 3 APLKGIRVLELARILAGPWIGQTLADLGADVIKVESPAGDDTRTWGPPFVTGEDDERLDA 62 Query: 61 TYFGQLNAGKRSLALDLKNADAIRLVHRMVAEADILVENFRPGVMDRLGLGYETLCEINP 120 YF N GKRS+ LD A+ V R+ A++D+L+ENF+ G + + GL YE+L ++NP Sbjct: 63 AYFHACNRGKRSVVLDFTTAEGQEAVRRLAAQSDVLLENFKVGGLAKYGLDYESLSKVNP 122 Query: 121 RLIYCSISGYGQSGPAAERAAYAMIVHAESGFDHSLMRYAGDRER-PAPGAIFVADILGG 179 RLIYCS++G+GQ GP A RA Y IV SG +M G+ +R P + ADI G Sbjct: 123 RLIYCSVTGFGQDGPYAHRAGYDYIVQGMSG----IMDLTGEPDREPQKIGVAFADIFTG 178 Query: 180 IFGYSAIQTAMVQRTRTGKGQRVDVALMDCMLNLLVYELQEAQFPIRSPR------PTYG 233 ++G A+Q A+ QR RTG+GQ++D+AL+DCM +L + ++PR P Sbjct: 179 LYGVIAVQAALAQRERTGEGQQIDMALLDCMTGVLANQALNFLVSGKAPRRLGNAHPNIA 238 Query: 234 PVR---ARDGDILIAPVTPRNFAALCEVTGQEELVNDPRFSTIPARGANWTAMMQVIEKW 290 P + DG +++A R F CE+ G+ +L D R+ T R + ++ + Sbjct: 239 PYQVFPTSDGHLIVAVGNDRQFVKFCELLGRPDLAADARYRTNADRVQHRDSLTPELAAE 298 Query: 291 TERHTVAECIAALDRAGVPCAEYRTPGAALTDAHLRQRGV-FGTVSDG--AGDFIGVNAP 347 T ++ + L+ +GVP T D + R + T G AG GV P Sbjct: 299 TAKYERDTLLEKLEASGVPGGPINTVADVFADPQIVHRQMRVDTPHTGAAAGTSPGVRTP 358 Query: 348 WQMSGADTPMGRQVPGIGAQRDDVLSRILGLSP 380 + SGA + R VP +G +VL+ I SP Sbjct: 359 IRFSGATLALDRGVPRLGEHTAEVLAEIGMNSP 391 >BMEI0898 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase Bme Brucella melitensis Length = 400 Score = 224 bits (571), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 135/371 (36%), Positives = 200/371 (53%), Gaps = 23/371 (6%) Query: 9 PLAGVRVLDFSIMVAGPYCARLLADVGAEVIKIEPPEGDDMRLRTP-----LREGHSTYF 63 PL G++V++ + ++AGP+ + L D+GA+VIK+E PEGDD R P E + YF Sbjct: 24 PLDGLKVVELARILAGPWVGQTLCDLGADVIKVESPEGDDTRTWGPPFIDVEGERSAAYF 83 Query: 64 GQLNAGKRSLALDLKNADAIRLVHRMVAEADILVENFRPGVMDRLGLGYETLCEINPRLI 123 N GKRS+ D + + LV R+VAEAD+++ENF+ G +D+ GL YE+L INP+LI Sbjct: 84 HACNRGKRSITADFRTEEGRELVRRLVAEADVVIENFKLGGLDKYGLDYESLKAINPQLI 143 Query: 124 YCSISGYGQSGPAAERAAYAMIVHAESGFDHSLMRYAGDRER-PAPGAIFVADILGGIFG 182 YCSI+G+G +GP AERA Y ++ G +M G+ +R P + ADI G++ Sbjct: 144 YCSITGFGHTGPYAERAGYDFMIQGMGG----IMDLTGEPDREPQKIGVAFADIFTGLYS 199 Query: 183 YSAIQTAMVQRTRTGKGQRVDVALMDCMLNLLVYELQEAQFPIRSPR------PTYGPVR 236 AIQ+A++ R RTGKGQ +D+AL DCM +L + +SP+ P P + Sbjct: 200 VIAIQSALIMRARTGKGQHIDMALFDCMSGVLANQAMNYLASGKSPKRMGNAHPNIAPYQ 259 Query: 237 A---RDGDILIAPVTPRNFAALCEVTGQEELVNDPRFSTIPARGANWTAMMQVIEKWTER 293 DG +IA F L + G EL D RF+T AR AN A+ ++E+ T++ Sbjct: 260 TLSVSDGYFIIACGNDGQFGKLSTLLGIGELAKDERFATNSARVANRAALTALLEERTKQ 319 Query: 294 HTVAECIAALDRAGVPCAEYRTPGAALTDAHLRQRGVFGTVSDGAGDFIGVNAPWQMSGA 353 + +A L + GVP T D + RG+ D G G+ P + S A Sbjct: 320 WKRDDLLAELAKIGVPAGPINTVADVFADPQFKARGM---KIDPQG-VPGLRTPIRFSDA 375 Query: 354 DTPMGRQVPGI 364 D + + P + Sbjct: 376 DLKLDSRSPKL 386 >TVN1161 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase Tvo Thermoplasma volcanium Length = 399 Score = 223 bits (569), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 133/395 (33%), Positives = 210/395 (53%), Gaps = 17/395 (4%) Query: 9 PLAGVRVLDFSIMVAGPYCARLLADVGAEVIKIEPPEGDDMRLRTP-LREGHSTYFGQLN 67 PL+G++++DF+ ++GP+ +L D+GAEVIK+E PEGD+ R P + G S YF +N Sbjct: 4 PLSGIKIIDFTRAMSGPFATMILGDLGAEVIKVESPEGDETRSWVPPMMNGQSAYFLSVN 63 Query: 68 AGKRSLALDLKNADAIRLVHRMVAEADILVENFRPGVMDRLGLGYETLCEINPRLIYCSI 127 K+S+ +DLK ++ + R++ +DI+VENFRPGV ++LG+ YE +N +IYCSI Sbjct: 64 RNKKSIVVDLKKSEGRDIALRLIEGSDIVVENFRPGVAEKLGISYEDAKRVNQNVIYCSI 123 Query: 128 SGYGQSGPAAERAAYAMIVHAESGFDHSLMRYAGDRE-RPAPGAIFVADILGGIFGYSAI 186 SGYG +GP + + + V A SG LM G+ P + + DI+ G+F +I Sbjct: 124 SGYGSTGPYMGLSGFDLSVMAFSG----LMSITGEPNGGPVKFGVPIVDIVTGMFAAISI 179 Query: 187 QTAMVQRTRTGKGQRVDVALMDCMLNLL----VYELQEAQFPIR-----SPRPTYGPVRA 237 +A+ R +TG+GQ +D A++D + +L Y + P++ S Y R Sbjct: 180 ISALRFRDKTGEGQYIDTAMIDSAVGILTHQATYFFATGKDPVKLGSAHSSIAPYQAFRT 239 Query: 238 RDGDILIAPVTPRNFAALCEVTGQEELVNDPRFSTIPARGANWTAMMQVIEKWTERHTVA 297 +DG I+I + + + LC+ EL DPRF T R N ++ VIE++ R + + Sbjct: 240 KDGYIVITAGSQKIWENLCDAIEMPELKQDPRFMTNELRVKNRYELVPVIEQYLTRLSTS 299 Query: 298 ECIAALDRAGVPCAEYRTPGAALTDAHLRQRG-VFGTVSDGAGDFIGVNAPWQMSGADTP 356 + + L + GVPC+ T AL + R V G SD G +N+P +MS Sbjct: 300 QAYSKLTKYGVPCSPVNTVSEALKSDQVNYRDMVVGVFSDIYGKVKLINSPLKMSRTPGQ 359 Query: 357 MGRQVPGIGAQRDDVLSRILGLSPDAIATLAATGT 391 + P +G DVL G + I+ L + T Sbjct: 360 IFSAPPVLGQHTIDVLKE-FGFRSEEISNLIDSKT 393 >BMEII0224 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase Bme Brucella melitensis Length = 454 Score = 223 bits (569), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 145/402 (36%), Positives = 212/402 (52%), Gaps = 18/402 (4%) Query: 9 PLAGVRVLDFSIMVAGPYCARLLADVGAEVIKIEPPEG-DDMR-LRTPLREGHSTYFGQL 66 PLAG++VLD S ++AGP+ LAD+GAEV KIE +G DD R P +G STYF Sbjct: 52 PLAGIKVLDLSRVLAGPWATMSLADMGAEVWKIENIQGGDDTRAWSVPNYKGASTYFLCA 111 Query: 67 NAGKRSLALDLKNADAIRLVHRMVAEADILVENFRPGVMDRLGLGYETLCEINPRLIYCS 126 N GK+SLALDLK+ + + ++H + +AD++VENFR G ++RL + YE+L +NP ++YCS Sbjct: 112 NRGKKSLALDLKSREGLEIIHELAKQADVVVENFRSGTVERLKIDYESLKALNPGIVYCS 171 Query: 127 ISGYGQSGPAAERAAYAMIVHAESGFDHSLMRYAGDRE-RPAPGAIFVADILGGIFGYSA 185 ISGYGQ+GP A+R Y +V AESG LM G + P + + DI+ G+ + Sbjct: 172 ISGYGQTGPEAQRPGYDFVVQAESG----LMSITGQIDGEPTRIGVAMTDIVAGMVATQS 227 Query: 186 IQTAMVQRTRTGKGQRVDVALMDCMLNLLVY----ELQEAQFPIR--SPRPTYGPVR--- 236 + A+ QR TG GQ +DV+L +C LN L+ L P R + PT P + Sbjct: 228 VLAALYQRKTTGLGQYIDVSLYECALNTLINVGSAHLNGGHVPARFGNAHPTVVPYQIFE 287 Query: 237 ARDGDILIAPVTPRNFAALCE-VTGQEELVNDPRFSTIPARGANWTAMMQVIEKWTERHT 295 DG +A R FA LCE + EL D RF T R N A++ + + +T Sbjct: 288 CSDGAFALAVGNDRQFAILCERIIDLPELAADERFKTASGRALNRAALIPPMAERFRTNT 347 Query: 296 VAECIAALDRAGVPCAEYRTPGAALTDAHLRQRGVFGTVSDGAGDFIGVNAPWQ-MSGAD 354 ++A + GVP + +T A +++ R V + I + P Q + + Sbjct: 348 RQHWMSACLKMGVPAGQVKTVPEAFESPNVKARQVVQKLESAHLGPISLVRPAQGLKAQE 407 Query: 355 TPMGRQVPGIGAQRDDVLSRILGLSPDAIATLAATGTFGKVQ 396 + P +G VL +LGL + +A L A G + Q Sbjct: 408 NAAYKAPPMLGEDSASVLGDVLGLDGNKLADLIAAGVIYQYQ 449 >PA0446 [C] COG1804 Predicted acyl-CoA transferases/carnitine dehydratase Pae Pseudomonas aeruginosa Length = 407 Score = 219 bits (557), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 145/398 (36%), Positives = 213/398 (53%), Gaps = 22/398 (5%) Query: 10 LAGVRVLDFSIMVAGPYCARLLADVGAEVIKIEPP-EGDDMRLRTP--LR--EGHST--- 61 L+ +RVLD S ++AGP+ ++LAD+GAEVIKIE P GDD R P L+ EG+ T Sbjct: 5 LSHIRVLDLSRVLAGPWAGQILADLGAEVIKIERPGSGDDTRAWGPPFLKDAEGNDTSEA 64 Query: 62 -YFGQLNAGKRSLALDLKNADAIRLVHRMVAEADILVENFRPGVMDRLGLGYETLCEINP 120 Y+ N K+S+ +D + R+V + A+ADIL+ENF+ G + GL YE+L ++NP Sbjct: 65 AYYLSANRNKKSVTVDFTQPEGQRIVRELAAKADILLENFKVGGLKAYGLDYESLKQVNP 124 Query: 121 RLIYCSISGYGQSGPAAERAAYAMIVHAESGFDHSLMRYAGDRERPAPGAIFVA--DILG 178 +LIYCSI+G+GQSGP A+RA Y ++ G SL A + E P + VA DIL Sbjct: 125 KLIYCSITGFGQSGPYAKRAGYDFMIQGLGGL-MSLTGRADNEEGAGPVKVGVALTDILT 183 Query: 179 GIFGYSAIQTAMVQRTRTGKGQRVDVALMD----CMLNLLVYELQEAQFPIR--SPRPTY 232 G++ +A+ A+ R +G GQ +D+AL+D C+ N + L P R + P Sbjct: 184 GLYSSTAVLAALAHRDVSGIGQHIDMALLDVQVACLANQTLNYLTTGVPPRRLGNAHPNI 243 Query: 233 GPVR---ARDGDILIAPVTPRNFAALCEVTGQEELVNDPRFSTIPARGANWTAMMQVIEK 289 P + DGD+++ F E+ E +DPRF+T AR AN ++ +I + Sbjct: 244 VPYQDFPTADGDMILTVGNDSQFRKFAELADHPEWADDPRFATNKARVANREVLIPLIRQ 303 Query: 290 WTERHTVAECIAALDRAGVPCAEYRTPGAALTDAHLRQRGVFGTVSDG-AGDFIGVNAPW 348 T HT AE I +L+RAGVPC D ++ RG+ + AG V +P Sbjct: 304 ATVLHTTAEWILSLERAGVPCGPINDLAQVFADPQVQARGLRVELPHPLAGTVPQVASPI 363 Query: 349 QMSGADTPMGRQVPGIGAQRDDVLSRILGLSPDAIATL 386 ++S P +G D+VL +LGL A+ L Sbjct: 364 RLSETPVEYRNPPPTLGQHTDEVLETLLGLDAAALERL 401