BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0030.p (237 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA2698 [Q] COG1335 Amidases related to nicotinamidase Pae Pseudo... 211 1e-54 SMa0376 [Q] COG1335 Amidases related to nicotinamidase Sme Sinor... 199 3e-51 RSc0242 [Q] COG1335 Amidases related to nicotinamidase Rso Ralst... 199 3e-51 SMa1821 [Q] COG1335 Amidases related to nicotinamidase Sme Sinor... 189 4e-48 AGl1749 [Q] COG1335 Amidases related to nicotinamidase Atu Agrob... 187 1e-47 >PA2698 [Q] COG1335 Amidases related to nicotinamidase Pae Pseudomonas aeruginosa Length = 226 Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 106/199 (53%), Positives = 135/199 (67%), Gaps = 2/199 (1%) Query: 25 LDMLTPDNSAIALIDYQPAMFQGVQSHDRLVTVNNVQILAKAAKLFKIPTVLTTVARDSF 84 L++LTP NS I ID QP M GVQS DR NNV LAKAAK+F IP +TTV DSF Sbjct: 5 LEVLTPQNSQIIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKVFDIPVTITTVETDSF 64 Query: 85 SGPFMPEVTSLFPKHDVIDRTSMNSWLDANFRKAVAATGRKKFVLAGLWTEAC-VIFPTL 143 SGP PE+ ++FP+ +++RTSMNSW D N R ++AA GRKK V+AGLWTE C F Sbjct: 65 SGPTYPELLAVFPEQKILERTSMNSWDDQNVRDSLAAAGRKKVVVAGLWTEVCNTTFALC 124 Query: 144 DMLKEGYEIYIAADACGDLSLEAHNRAMERAIQAGAVPITSSQYAYELQQDWARSETYEG 203 ML+ GYEIY+ ADA G S +AH AM+R +QAG VP+T Q E Q+DWAR +TY+ Sbjct: 125 AMLEGGYEIYMVADASGGTSSDAHKYAMDRMVQAGVVPVTWQQVLLEWQRDWARRDTYDA 184 Query: 204 MMDIQRAHS-PYGIQIRFS 221 +M I + HS YG+ + ++ Sbjct: 185 VMAIAKEHSGAYGMGVDYA 203 >SMa0376 [Q] COG1335 Amidases related to nicotinamidase Sme Sinorhizobium meliloti Length = 229 Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 142/222 (63%), Gaps = 8/222 (3%) Query: 22 MSKLDMLTPDNSAIALIDYQPAMFQGVQSHDRLVTVNNVQILAKAAKLFKIPTVLTTVAR 81 MSKL++LTP NS + ID QP M GVQS DR NNV LAKAAK+F +PT +TTV Sbjct: 1 MSKLEVLTPANSQLIFIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKIFNVPTTITTVET 60 Query: 82 DSFSGPFMPEVTSLFPKHDVIDRTSMNSWLDANFRKAV---AATGRKKFVLAGLWTEACV 138 SFSG PE+ ++FP++D+++RTSMNSW D N R A+ AA GRKK V++GLWTE C Sbjct: 61 QSFSGNTFPELLAVFPENDLLERTSMNSWDDQNVRDALAKNAANGRKKIVVSGLWTEVCN 120 Query: 139 IFPTLDMLKE--GYEIYIAADACGDLSLEAHNRAMERAIQAGAVPITSSQYAYELQQDWA 196 L L + YEIY+ ADA G S +AH AM+R +QAG +P+T Q E Q+DWA Sbjct: 121 TTFALSALHDVPEYEIYMVADASGGTSSDAHKYAMDRMVQAGVIPVTWQQVLLEWQRDWA 180 Query: 197 RSETYEGMMDIQRAHS-PYGIQIRFSKWALGEHASEGGAKAG 237 R ETY+ + + + HS YG+ I ++ + H +E K G Sbjct: 181 RKETYDAVTTLVKEHSGAYGMGIDYAYTMV--HGAEERVKHG 220 >RSc0242 [Q] COG1335 Amidases related to nicotinamidase Rso Ralstonia solanacearum Length = 228 Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 101/204 (49%), Positives = 133/204 (65%), Gaps = 2/204 (0%) Query: 20 FSMSKLDMLTPDNSAIALIDYQPAMFQGVQSHDRLVTVNNVQILAKAAKLFKIPTVLTTV 79 S KL++LTP N + ID+QP M GVQS DR V NN LAKAA++F IPT +TTV Sbjct: 1 MSNPKLEVLTPQNCQLIFIDHQPQMAFGVQSIDRQVLKNNTVGLAKAARIFDIPTTITTV 60 Query: 80 ARDSFSGPFMPEVTSLFPKHDVIDRTSMNSWLDANFRKAVAATGRKKFVLAGLWTEAC-V 138 + FSG PE+ +FP ++++RTSMNSW D R +A GRKK V++GLWTE C Sbjct: 61 ETEGFSGYTYPELLDVFPGKELLERTSMNSWDDQKVRDVLARNGRKKVVVSGLWTEVCNT 120 Query: 139 IFPTLDMLKEGYEIYIAADACGDLSLEAHNRAMERAIQAGAVPITSSQYAYELQQDWARS 198 F M + GYEIY+ ADA G S EAH+ AM+R IQAGAVP+T Q E Q+DWAR Sbjct: 121 TFALCAMAEGGYEIYMVADASGGTSKEAHDYAMQRLIQAGAVPVTWQQVLLEWQRDWARR 180 Query: 199 ETYEGMMDIQRAHS-PYGIQIRFS 221 +TY+ +M + + HS YG+ + ++ Sbjct: 181 DTYDAVMQLVKEHSGAYGMGVDYA 204 >SMa1821 [Q] COG1335 Amidases related to nicotinamidase Sme Sinorhizobium meliloti Length = 236 Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 96/207 (46%), Positives = 135/207 (65%), Gaps = 3/207 (1%) Query: 27 MLTPDNSAIALIDYQPAMFQGVQSHDRLVTVNNVQILAKAAKLFKIPTVLTTVARDSFSG 86 +++P + A+ +ID+Q M +S D + NN ++A AA F +PT+LTTVA SFSG Sbjct: 31 LVSPKDHALIMIDFQSQMSFATKSIDAVQLRNNAALVASAAAGFGVPTILTTVAEKSFSG 90 Query: 87 PFMPEVTSLFPKHDVIDRTSMNSWLDANFRKAVAATGRKKFVLAGLWTEACVIFPTLDML 146 P E+T FP+ ++DRTSMN+W DA + V G+K+ V GLWT C++ PTL L Sbjct: 91 PMFAEITDAFPEQPLLDRTSMNTWEDAAVIEEVNRIGKKRLVFCGLWTSVCIVGPTLSAL 150 Query: 147 KEGYEIYIAADACGDLSLEAHNRAMERAIQAGAVPITSSQYAYELQQDWARSETYEGMMD 206 +G+E Y+ ADACGD+S EAH RAM+R +QAG P+TS QY ELQ+DWAR++TY+ Sbjct: 151 DQGFEAYVIADACGDVSDEAHERAMDRMVQAGVRPMTSLQYMLELQRDWARTDTYDMTTG 210 Query: 207 I-QRAHSPYGIQIRFSKWALGEHASEG 232 I ++ YG+ I ++K G ASEG Sbjct: 211 IAKKFGGAYGLGIIYAKTMFG--ASEG 235 >AGl1749 [Q] COG1335 Amidases related to nicotinamidase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 216 Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 97/191 (50%), Positives = 127/191 (66%), Gaps = 6/191 (3%) Query: 37 LIDYQPAMFQGVQSHDRLVTVNNVQILAKAAKLFKIPTVLTTVARDSFSGPFMPEVTSLF 96 ID QP M GVQS DR NNV LAKAAK+F IPT +TTV +SFSG PE+ ++F Sbjct: 3 FIDQQPQMAFGVQSIDRQTLKNNVVGLAKAAKIFNIPTTITTVETESFSGNTFPELLAVF 62 Query: 97 PKHDVIDRTSMNSWLDANFRKAV---AATGRKKFVLAGLWTEACVIFPTLDMLKE--GYE 151 P++D+++RTSMNSW D N R A+ AATGR+K V++GLWTE C L L + YE Sbjct: 63 PENDILERTSMNSWDDQNVRDALAKNAATGRRKIVVSGLWTEVCNTTFALSALHDVADYE 122 Query: 152 IYIAADACGDLSLEAHNRAMERAIQAGAVPITSSQYAYELQQDWARSETYEGMMDIQRAH 211 IY+ ADA G SL+AH AM+R +QAG +P+T Q E Q+DWAR ETY+ + + + H Sbjct: 123 IYMVADASGGTSLDAHKYAMDRMVQAGVIPVTWQQVLLEWQRDWARKETYDAVTSLVKEH 182 Query: 212 S-PYGIQIRFS 221 S YG+ I ++ Sbjct: 183 SGAYGMGIDYA 193