BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0156.0011.p         (99 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM4274 [S] COG3162 Predicted membrane protein Sty Salmonella ty...    81   5e-16
yjcH [S] COG3162 Predicted membrane protein Eco Escherichia coli...    81   7e-16
YPO0252 [S] COG3162 Predicted membrane protein Ype Yersinia pestis     81   8e-16
ZyjcH [S] COG3162 Predicted membrane protein EcZ Escherichia col...    80   1e-15
ECs5050 [S] COG3162 Predicted membrane protein Ecs Escherichia c...    80   1e-15

>STM4274 [S] COG3162 Predicted membrane protein Sty Salmonella typhimurium
           LT2
          Length = 104

 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 60/96 (62%)

Query: 4   KTIQDHPAFRQLARERACLGVGMSMVMAAAYFAYILTIAFRPRLLGHPLWHGTVISWGVL 63
           + I+D   FR+L  +R      +S++M A Y ++IL IAF P  LG PL  GT ++ G+ 
Sbjct: 7   QRIEDSARFRELVEKRQRFATILSVIMLAVYISFILLIAFAPGWLGTPLHAGTSVTRGIP 66

Query: 64  IGVGLIALGFVLTAAYVRRANSRFDQLGQLLLEDLQ 99
           IGVG+I + FVLT  Y+ RAN  FD+L   +L +++
Sbjct: 67  IGVGVIVISFVLTGIYIWRANGEFDRLNNAVLHEVK 102


>yjcH [S] COG3162 Predicted membrane protein Eco Escherichia coli K12
          Length = 104

 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 59/96 (61%)

Query: 4   KTIQDHPAFRQLARERACLGVGMSMVMAAAYFAYILTIAFRPRLLGHPLWHGTVISWGVL 63
           + I+D+  FR+L  +R      +S++M A Y  +IL IAF P  LG PL   T ++ G+ 
Sbjct: 7   QRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIP 66

Query: 64  IGVGLIALGFVLTAAYVRRANSRFDQLGQLLLEDLQ 99
           IGVG+I + FVLT  Y+ RAN  FD+L   +L ++Q
Sbjct: 67  IGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQ 102


>YPO0252 [S] COG3162 Predicted membrane protein Ype Yersinia pestis
          Length = 103

 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 62/96 (64%)

Query: 4   KTIQDHPAFRQLARERACLGVGMSMVMAAAYFAYILTIAFRPRLLGHPLWHGTVISWGVL 63
           + I+D+P F++L ++R+     +S++    Y A+I  IAF P+ LG P++ G+ ++ G+ 
Sbjct: 7   QEIEDNPRFQELVKKRSRFAWLLSLITLTMYVAFIFLIAFEPQWLGTPIYTGSSVTRGIP 66

Query: 64  IGVGLIALGFVLTAAYVRRANSRFDQLGQLLLEDLQ 99
           +GVGLI   F+LT  YV RAN  FD+L   ++ +++
Sbjct: 67  VGVGLIVTSFILTGIYVIRANGEFDRLTAEIIREVK 102


>ZyjcH [S] COG3162 Predicted membrane protein EcZ Escherichia coli O157:H7
           EDL933
          Length = 104

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 59/96 (61%)

Query: 4   KTIQDHPAFRQLARERACLGVGMSMVMAAAYFAYILTIAFRPRLLGHPLWHGTVISWGVL 63
           + I+D+  FR+L  +R      +S++M A Y  +IL IAF P  LG PL   T ++ G+ 
Sbjct: 7   QRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIP 66

Query: 64  IGVGLIALGFVLTAAYVRRANSRFDQLGQLLLEDLQ 99
           +GVG+I + FVLT  Y+ RAN  FD+L   +L ++Q
Sbjct: 67  VGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQ 102


>ECs5050 [S] COG3162 Predicted membrane protein Ecs Escherichia coli O157:H7
          Length = 104

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 59/96 (61%)

Query: 4   KTIQDHPAFRQLARERACLGVGMSMVMAAAYFAYILTIAFRPRLLGHPLWHGTVISWGVL 63
           + I+D+  FR+L  +R      +S++M A Y  +IL IAF P  LG PL   T ++ G+ 
Sbjct: 7   QRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIP 66

Query: 64  IGVGLIALGFVLTAAYVRRANSRFDQLGQLLLEDLQ 99
           +GVG+I + FVLT  Y+ RAN  FD+L   +L ++Q
Sbjct: 67  VGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQ 102