BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0156.0010.p (552 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3234 [R] COG4147 Predicted symporter Pae Pseudomonas aeruginosa 659 0.0 ZyjcG [R] COG4147 Predicted symporter EcZ Escherichia coli O157:... 639 0.0 ECs5049 [R] COG4147 Predicted symporter Ecs Escherichia coli O15... 639 0.0 yjcG [R] COG4147 Predicted symporter Eco Escherichia coli K12 639 0.0 STM4273 [R] COG4147 Predicted symporter Sty Salmonella typhimuri... 636 0.0 >PA3234 [R] COG4147 Predicted symporter Pae Pseudomonas aeruginosa Length = 551 Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/527 (63%), Positives = 416/527 (78%), Gaps = 2/527 (0%) Query: 24 ADALTAATGTRRSLNATAIAMFLGFVAVSLAITWWAARRGTSTAKDFYAAGAGLTGVENG 83 ADALT R+ LN +AI MF+ FV +L IT+WA++R S A D+YAAG +TG +NG Sbjct: 20 ADALTGDV-QRQPLNVSAIVMFVAFVGATLCITYWASKRNRSAA-DYYAAGGRITGFQNG 77 Query: 84 LAIAGDYTSAATFLGVTALVYTSGYDGMIYAIGFLVGFPMILFVITEPLSNLVRYTFADV 143 LAIAGDY SAA+FLG++ALV+TSGYDG+IY+IGFLVG+P+ILF+I E L NL +YTFADV Sbjct: 78 LAIAGDYMSAASFLGISALVFTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADV 137 Query: 144 AAYRLSEVPVRAVASVNTLVIVVFYLIAQLVGAGKLIQLLFGLPYIYAVGIVGGLMMVYV 203 A+YRL + +R +++ +LV+V FYLIAQ+VGAGKLI+LLFGL Y AV +VG LM++YV Sbjct: 138 ASYRLKQKQIRTLSACGSLVVVAFYLIAQMVGAGKLIELLFGLNYHVAVVLVGILMVLYV 197 Query: 204 TFGGMLATTWVQIIKAVLLMSGSVLMSILILGHFGFSLEALFREAITLHPKADAIMAPGG 263 FGGMLATTWVQIIKAVLL+SG+ M+I++L H F + LF EAI +HPK +AIM+PGG Sbjct: 198 LFGGMLATTWVQIIKAVLLLSGASFMAIMVLKHVNFDVSTLFSEAIKVHPKGEAIMSPGG 257 Query: 264 LVKDPVSAISLGLALIFGTAGLPHILMRFFTVSDARQARTSVLVATGFISIFYSLLFVLG 323 LVKDP+SA SLG AL+FGTAGLPHILMRFFTVSDA++AR SV ATGFI FY L F++G Sbjct: 258 LVKDPISAFSLGFALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIG 317 Query: 324 FGAIAIVSANPQFRDASGGLIGGVNMVALHLADAVGGSLLLGFISAVAFATILAVVSGLT 383 FGAI +VS NP F+DA+G LIGG NM A+HLADAVGGSL LGFISAVAFATILAVV+GLT Sbjct: 318 FGAILLVSTNPDFKDATGALIGGNNMAAVHLADAVGGSLFLGFISAVAFATILAVVAGLT 377 Query: 384 LAGASAASHDLYARVVRKGRASEQEEVRVSKAAAVAISLLSMGLGVVFENQNIAFMVGLV 443 LAGASA SHDLYA V + G+A+E++E+RVSK VA+ ++++ LG++FE QNIAFMVGL Sbjct: 378 LAGASAVSHDLYASVFKGGKANEKDELRVSKMTTVALGVVAIVLGILFEKQNIAFMVGLA 437 Query: 444 FAIAASANFPVILLSIVWPDLTTRGAVSGSLAGLLASVGLVALSPGVWTATLKLGPAPFP 503 F+IAAS NFPV+LLS+ W LTTRGA+ G GL+ +VGL+ L P +W L A +P Sbjct: 438 FSIAASCNFPVLLLSMYWKKLTTRGAMIGGWMGLITAVGLMVLGPTIWVQILGHEKAIYP 497 Query: 504 YDNPALVSVPLAFAVSWAISVLDRSAAAASVRASFGAQHVRAQTGLG 550 Y+ PAL S+ +AF W S+ D+SAAA RA F Q +R+QTGLG Sbjct: 498 YEYPALFSMIVAFVGIWFFSITDKSAAADEERARFFPQFIRSQTGLG 544 >ZyjcG [R] COG4147 Predicted symporter EcZ Escherichia coli O157:H7 EDL933 Length = 549 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/534 (61%), Positives = 410/534 (76%), Gaps = 4/534 (0%) Query: 21 PAAADALTAATG--TRRSLNATAIAMFLGFVAVSLAITWWAARRGTSTAKDFYAAGAGLT 78 P AA+A A +G R+ N AI MFL FV +L IT+WA++R + D+Y AG +T Sbjct: 13 PFAANAADAISGAVERQPTNWQAIIMFLIFVVFTLGITYWASKR-VRSRNDYYTAGGNIT 71 Query: 79 GVENGLAIAGDYTSAATFLGVTALVYTSGYDGMIYAIGFLVGFPMILFVITEPLSNLVRY 138 G +NGLAIAGDY SAA+FLG++ALV+TSGYDG+IY++GFLVG+P+ILF+I E L NL RY Sbjct: 72 GFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSLGFLVGWPIILFLIAERLRNLGRY 131 Query: 139 TFADVAAYRLSEVPVRAVASVNTLVIVVFYLIAQLVGAGKLIQLLFGLPYIYAVGIVGGL 198 TFADVA+YRL + P+R +++ +LV+V YLIAQ+VGAGKLI+LLFGL Y AV +VG L Sbjct: 132 TFADVASYRLKQGPIRILSACGSLVVVALYLIAQMVGAGKLIELLFGLNYHIAVVLVGVL 191 Query: 199 MMVYVTFGGMLATTWVQIIKAVLLMSGSVLMSILILGHFGFSLEALFREAITLHPKADAI 258 MM+YV FGGMLATTWVQIIKAVLL+ G+ M+ +++ H GFS LF EA+ +HPK I Sbjct: 192 MMMYVLFGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFSEAMAVHPKGVDI 251 Query: 259 MAPGGLVKDPVSAISLGLALIFGTAGLPHILMRFFTVSDARQARTSVLVATGFISIFYSL 318 M PGGLVKDP+SA+SLGL L+FGTAGLPHILMRFFTVSDAR+AR SV ATGF+ FY L Sbjct: 252 MKPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFYATGFMGYFYIL 311 Query: 319 LFVLGFGAIAIVSANPQFRDASGGLIGGVNMVALHLADAVGGSLLLGFISAVAFATILAV 378 F++GFGAI +V ANP+++DA+G LIGG NM A+HLA+AVGG+L LGFISAVAFATILAV Sbjct: 312 TFIIGFGAIMLVGANPEYKDAAGHLIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAV 371 Query: 379 VSGLTLAGASAASHDLYARVVRKGRASEQEEVRVSKAAAVAISLLSMGLGVVFENQNIAF 438 V+GLTLAGASA SHDLYA V +KG A+E+EE+RVSK + + ++++ LGV+FENQNIAF Sbjct: 372 VAGLTLAGASAVSHDLYANVFKKG-ATEREELRVSKITVLILGVIAIILGVLFENQNIAF 430 Query: 439 MVGLVFAIAASANFPVILLSIVWPDLTTRGAVSGSLAGLLASVGLVALSPGVWTATLKLG 498 MVGL FAIAAS NFP+ILLS+ W LTTRGA+ G GL+ +V L+ L P +W L Sbjct: 431 MVGLAFAIAASCNFPIILLSMYWSKLTTRGAMMGGWLGLITAVVLMILGPTIWVQILGHE 490 Query: 499 PAPFPYDNPALVSVPLAFAVSWAISVLDRSAAAASVRASFGAQHVRAQTGLGVE 552 A FPY+ PAL S+ +AF W S D SA A R F AQ +R+QTG GVE Sbjct: 491 KAIFPYEYPALFSITVAFLGIWFFSATDNSAEGARERELFRAQFIRSQTGFGVE 544 >ECs5049 [R] COG4147 Predicted symporter Ecs Escherichia coli O157:H7 Length = 549 Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/534 (61%), Positives = 410/534 (76%), Gaps = 4/534 (0%) Query: 21 PAAADALTAATG--TRRSLNATAIAMFLGFVAVSLAITWWAARRGTSTAKDFYAAGAGLT 78 P AA+A A +G R+ N AI MFL FV +L IT+WA++R + D+Y AG +T Sbjct: 13 PFAANAADAISGAVERQPTNWQAIIMFLIFVVFTLGITYWASKR-VRSRNDYYTAGGNIT 71 Query: 79 GVENGLAIAGDYTSAATFLGVTALVYTSGYDGMIYAIGFLVGFPMILFVITEPLSNLVRY 138 G +NGLAIAGDY SAA+FLG++ALV+TSGYDG+IY++GFLVG+P+ILF+I E L NL RY Sbjct: 72 GFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSLGFLVGWPIILFLIAERLRNLGRY 131 Query: 139 TFADVAAYRLSEVPVRAVASVNTLVIVVFYLIAQLVGAGKLIQLLFGLPYIYAVGIVGGL 198 TFADVA+YRL + P+R +++ +LV+V YLIAQ+VGAGKLI+LLFGL Y AV +VG L Sbjct: 132 TFADVASYRLKQGPIRILSACGSLVVVALYLIAQMVGAGKLIELLFGLNYHIAVVLVGVL 191 Query: 199 MMVYVTFGGMLATTWVQIIKAVLLMSGSVLMSILILGHFGFSLEALFREAITLHPKADAI 258 MM+YV FGGMLATTWVQIIKAVLL+ G+ M+ +++ H GFS LF EA+ +HPK I Sbjct: 192 MMMYVLFGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFSEAMAVHPKGVDI 251 Query: 259 MAPGGLVKDPVSAISLGLALIFGTAGLPHILMRFFTVSDARQARTSVLVATGFISIFYSL 318 M PGGLVKDP+SA+SLGL L+FGTAGLPHILMRFFTVSDAR+AR SV ATGF+ FY L Sbjct: 252 MKPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFYATGFMGYFYIL 311 Query: 319 LFVLGFGAIAIVSANPQFRDASGGLIGGVNMVALHLADAVGGSLLLGFISAVAFATILAV 378 F++GFGAI +V ANP+++DA+G LIGG NM A+HLA+AVGG+L LGFISAVAFATILAV Sbjct: 312 TFIIGFGAIMLVGANPEYKDAAGHLIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAV 371 Query: 379 VSGLTLAGASAASHDLYARVVRKGRASEQEEVRVSKAAAVAISLLSMGLGVVFENQNIAF 438 V+GLTLAGASA SHDLYA V +KG A+E+EE+RVSK + + ++++ LGV+FENQNIAF Sbjct: 372 VAGLTLAGASAVSHDLYANVFKKG-ATEREELRVSKITVLILGVIAIILGVLFENQNIAF 430 Query: 439 MVGLVFAIAASANFPVILLSIVWPDLTTRGAVSGSLAGLLASVGLVALSPGVWTATLKLG 498 MVGL FAIAAS NFP+ILLS+ W LTTRGA+ G GL+ +V L+ L P +W L Sbjct: 431 MVGLAFAIAASCNFPIILLSMYWSKLTTRGAMMGGWLGLITAVVLMILGPTIWVQILGHE 490 Query: 499 PAPFPYDNPALVSVPLAFAVSWAISVLDRSAAAASVRASFGAQHVRAQTGLGVE 552 A FPY+ PAL S+ +AF W S D SA A R F AQ +R+QTG GVE Sbjct: 491 KAIFPYEYPALFSITVAFLGIWFFSATDNSAEGARERELFRAQFIRSQTGFGVE 544 >yjcG [R] COG4147 Predicted symporter Eco Escherichia coli K12 Length = 549 Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/534 (61%), Positives = 410/534 (76%), Gaps = 4/534 (0%) Query: 21 PAAADALTAATG--TRRSLNATAIAMFLGFVAVSLAITWWAARRGTSTAKDFYAAGAGLT 78 P AA+A A +G R+ N AI MFL FV +L IT+WA++R + D+Y AG +T Sbjct: 13 PFAANAADAISGAVERQPTNWQAIIMFLIFVVFTLGITYWASKR-VRSRSDYYTAGGNIT 71 Query: 79 GVENGLAIAGDYTSAATFLGVTALVYTSGYDGMIYAIGFLVGFPMILFVITEPLSNLVRY 138 G +NGLAIAGDY SAA+FLG++ALV+TSGYDG+IY++GFLVG+P+ILF+I E L NL RY Sbjct: 72 GFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSLGFLVGWPIILFLIAERLRNLGRY 131 Query: 139 TFADVAAYRLSEVPVRAVASVNTLVIVVFYLIAQLVGAGKLIQLLFGLPYIYAVGIVGGL 198 TFADVA+YRL + P+R +++ +LV+V YLIAQ+VGAGKLI+LLFGL Y AV +VG L Sbjct: 132 TFADVASYRLKQGPIRILSACGSLVVVALYLIAQMVGAGKLIELLFGLNYHIAVVLVGVL 191 Query: 199 MMVYVTFGGMLATTWVQIIKAVLLMSGSVLMSILILGHFGFSLEALFREAITLHPKADAI 258 MM+YV FGGMLATTWVQIIKAVLL+ G+ M+ +++ H GFS LF EA+ +HPK I Sbjct: 192 MMMYVLFGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFSEAMAVHPKGVDI 251 Query: 259 MAPGGLVKDPVSAISLGLALIFGTAGLPHILMRFFTVSDARQARTSVLVATGFISIFYSL 318 M PGGLVKDP+SA+SLGL L+FGTAGLPHILMRFFTVSDAR+AR SV ATGF+ FY L Sbjct: 252 MKPGGLVKDPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFYATGFMGYFYIL 311 Query: 319 LFVLGFGAIAIVSANPQFRDASGGLIGGVNMVALHLADAVGGSLLLGFISAVAFATILAV 378 F++GFGAI +V ANP+++DA+G LIGG NM A+HLA+AVGG+L LGFISAVAFATILAV Sbjct: 312 TFIIGFGAIMLVGANPEYKDAAGHLIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAV 371 Query: 379 VSGLTLAGASAASHDLYARVVRKGRASEQEEVRVSKAAAVAISLLSMGLGVVFENQNIAF 438 V+GLTLAGASA SHDLYA V +KG A+E+EE+RVSK + + ++++ LGV+FENQNIAF Sbjct: 372 VAGLTLAGASAVSHDLYANVFKKG-ATEREELRVSKITVLILGVIAIILGVLFENQNIAF 430 Query: 439 MVGLVFAIAASANFPVILLSIVWPDLTTRGAVSGSLAGLLASVGLVALSPGVWTATLKLG 498 MVGL FAIAAS NFP+ILLS+ W LTTRGA+ G GL+ +V L+ L P +W L Sbjct: 431 MVGLAFAIAASCNFPIILLSMYWSKLTTRGAMMGGWLGLITAVVLMILGPTIWVQILGHE 490 Query: 499 PAPFPYDNPALVSVPLAFAVSWAISVLDRSAAAASVRASFGAQHVRAQTGLGVE 552 A FPY+ PAL S+ +AF W S D SA A R F AQ +R+QTG GVE Sbjct: 491 KAIFPYEYPALFSITVAFLGIWFFSATDNSAEGARERELFRAQFIRSQTGFGVE 544 >STM4273 [R] COG4147 Predicted symporter Sty Salmonella typhimurium LT2 Length = 549 Score = 636 bits (1640), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/528 (61%), Positives = 407/528 (77%), Gaps = 3/528 (0%) Query: 25 DALTAATGTRRSLNATAIAMFLGFVAVSLAITWWAARRGTSTAKDFYAAGAGLTGVENGL 84 DA++ A R+ N AI MFL FV +L IT+WA++R + D+Y AG +TG +NGL Sbjct: 20 DAISGAV-ERQPTNWQAIIMFLIFVVFTLGITYWASKR-VRSRSDYYTAGGNITGFQNGL 77 Query: 85 AIAGDYTSAATFLGVTALVYTSGYDGMIYAIGFLVGFPMILFVITEPLSNLVRYTFADVA 144 AIAGDY SAA+FLG++ALV+TSGYDG+IY++GFLVG+P+ILF+I E L NL RYTFADVA Sbjct: 78 AIAGDYMSAASFLGISALVFTSGYDGLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVA 137 Query: 145 AYRLSEVPVRAVASVNTLVIVVFYLIAQLVGAGKLIQLLFGLPYIYAVGIVGGLMMVYVT 204 +YRL + P+R +++ +LV+V YLIAQ+VGAGKLI+LLFGL Y AV +VG LMM+YV Sbjct: 138 SYRLKQGPIRILSACGSLVVVALYLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVL 197 Query: 205 FGGMLATTWVQIIKAVLLMSGSVLMSILILGHFGFSLEALFREAITLHPKADAIMAPGGL 264 FGGMLATTWVQIIKAVLL+ G+ M+ +++ H GFS LF EA+ +HPK AIM+PGGL Sbjct: 198 FGGMLATTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFTEAMAVHPKGTAIMSPGGL 257 Query: 265 VKDPVSAISLGLALIFGTAGLPHILMRFFTVSDARQARTSVLVATGFISIFYSLLFVLGF 324 V+DP+SA+SLGL L+FGTAGLPHILMRFFTVSDAR+AR SV ATGF+ FY L F++GF Sbjct: 258 VQDPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGF 317 Query: 325 GAIAIVSANPQFRDASGGLIGGVNMVALHLADAVGGSLLLGFISAVAFATILAVVSGLTL 384 GAI +V ANP ++DA+G LIGG NM A+HLA+AVGG+L LGFISAVAFATILAVV+GLTL Sbjct: 318 GAIMLVGANPAYKDAAGALIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTL 377 Query: 385 AGASAASHDLYARVVRKGRASEQEEVRVSKAAAVAISLLSMGLGVVFENQNIAFMVGLVF 444 AGASA SHDLYA V RKG A+E+EE++VSK + + ++++ LGV+FENQNIAFMVGL F Sbjct: 378 AGASAVSHDLYANVFRKG-ATEREELKVSKITVLVLGVIAIILGVLFENQNIAFMVGLAF 436 Query: 445 AIAASANFPVILLSIVWPDLTTRGAVSGSLAGLLASVGLVALSPGVWTATLKLGPAPFPY 504 AIAAS NFP+ILLS+ W LTTRGA+ G GLL +V L+ L P +W L A FPY Sbjct: 437 AIAASCNFPIILLSMYWSKLTTRGAMLGGWLGLLTAVVLMILGPTIWVQILGHEKAIFPY 496 Query: 505 DNPALVSVPLAFAVSWAISVLDRSAAAASVRASFGAQHVRAQTGLGVE 552 + PAL S+ +AF W S D SA R F AQ +R+QTG GV+ Sbjct: 497 EYPALFSISVAFLGIWFFSATDNSAEGNREREQFRAQFIRSQTGFGVQ 544