BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0155.0010.p (394 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value STM0721 [M] COG0438 Glycosyltransferase Sty Salmonella typhimuri... 176 1e-43 PA1385 [M] COG0438 Glycosyltransferase Pae Pseudomonas aeruginosa 146 6e-35 SMb21231 [M] COG0438 Glycosyltransferase Sme Sinorhizobium meliloti 118 2e-26 NMB0218 [M] COG0438 Glycosyltransferase Nme Neisseria meningitid... 117 4e-26 NMA0048 [M] COG0438 Glycosyltransferase NmA Neisseria meningitid... 117 4e-26 >STM0721 [M] COG0438 Glycosyltransferase Sty Salmonella typhimurium LT2 Length = 377 Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 113/374 (30%), Positives = 181/374 (48%), Gaps = 5/374 (1%) Query: 11 RILYIVNEDWAFLLNRLPMARAARDAGLEVHVATNV--SSGAASIKAENFVLHQIPFQRG 68 R+ Y VN DW F L+ A AARDAG E+H+ ++ K F+ H + Sbjct: 3 RLCYFVNSDWYFDLHWTERAIAARDAGYEIHIISHFIGEEIIKKFKTLGFICHNVSLVAQ 62 Query: 69 QRAMLTAAAALKAIREVERAIKPSIVHHSGVQCCVFGSLAALDQRFPVVNAITGLGYIFT 128 M A R++ + I P ++H ++ C+ G ++A PVV + GLG IF Sbjct: 63 SFNMFVFFRAFLNARKIIKEINPDLLHCITLKPCLIGGVSARRSNSPVVISFVGLGRIFL 122 Query: 129 SSSSQSRLLKRVLTRLLPWLLNRSRSYTIVQNPDDREALMAL-GAKPDRMTLIPGSGVDD 187 ++ R+L+ + + ++ R I ++ DR + L G + +I G+G++ Sbjct: 123 YNTVPMRILRALTVLVYKYIAGNKRGVFIFEHDKDRRKISRLVGIDYHKTIVIEGAGINP 182 Query: 188 ESLQPLPEPAGPITIG-FAGRLLVDKGIRTLVRAHGLLRDQGHDINLIIAGNPDPANPSS 246 + + E I I FA R+L KG+ L+ A +LR + L +AG + + Sbjct: 183 DIYKFSIEKKHEIPIVLFASRMLWSKGLGDLIEAKKILRQKNIHFVLNVAGILAEDDKDA 242 Query: 247 VSHEEIEAWIARPGITWLGHIDNIASLWRASHIAALPS-YREGLPGALMEAAACGRPLIA 305 + E I W I WLG N+ L + S+I ALPS Y EG+P L+EA++ GR IA Sbjct: 243 IPLELIHHWHNEGLINWLGRSSNVYELIQKSNIVALPSIYPEGVPRLLLEASSVGRACIA 302 Query: 306 TDTPGCREIVLADQTGLLVPLEDPIALASAILRLAEAPELRARFGAAARRRVSERFSARI 365 DT GC +++ + GL+V LA + L + P++R GA R+RV E FS+ + Sbjct: 303 YDTGGCDSLIIHNYNGLIVKSNSAQELAVELEYLLKNPQIRLEMGANGRKRVKELFSSIL 362 Query: 366 IGYTITQLYGDILA 379 + Q+Y D + Sbjct: 363 VINKTLQIYKDTIG 376 >PA1385 [M] COG0438 Glycosyltransferase Pae Pseudomonas aeruginosa Length = 374 Score = 146 bits (369), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 96/290 (33%), Positives = 151/290 (52%), Gaps = 8/290 (2%) Query: 87 RAIKPSIVHHSGVQCCVFGSLAALDQRFPV-VNAITGLGYIFTSSSSQSRLLKRVLTRLL 145 RA+K V ++ ++G +AA + + I G G+I+ S + L+++L ++ Sbjct: 83 RALKIDAVFSYFIKPVIYGGIAAFLTGVRLRYSMIEGAGFIY-SEEGYTHFLRKLLRHVV 141 Query: 146 PW---LLNRSRSYTIVQNPDDREALMA-LGAKPDRMTLIPGSGVDDESLQPLPEPAGPIT 201 L+ R S + N DD + ++ AK R ++PG GVD + PIT Sbjct: 142 TCSIRLVLRFSSRVFLLNQDDYDLFVSPRLAKTGRALILPGIGVDLDYFAASSPVLRPIT 201 Query: 202 IGFAGRLLVDKGIRTLVRAHGLLRDQGHDINLIIAGNPDPANPSSVSHEEIEAWIARPGI 261 F RLL +KGI V A ++R + ++ G D +NP VS EE+ W+A + Sbjct: 202 FVFVARLLKEKGIYDFVEAARIVRKRSPLARFLVLGGVD-SNPGKVSREEMNQWVAEGLL 260 Query: 262 TWLGHIDNIASLWRASHIAALPSY-REGLPGALMEAAACGRPLIATDTPGCREIVLADQT 320 W GH+ +I + + + LPSY REG+P + EA + G+P+I TD GCRE VL Sbjct: 261 EWPGHVHDIKAWVANTSVFVLPSYYREGVPRSSQEAMSLGKPVITTDWTGCRETVLDGFN 320 Query: 321 GLLVPLEDPIALASAILRLAEAPELRARFGAAARRRVSERFSARIIGYTI 370 G LVP++ P +LA+A+L+ E+P L AR G A+R +R+ I T+ Sbjct: 321 GFLVPIKSPQSLAAAMLKFIESPSLIARMGEASRSLAEQRYDVFRINNTM 370 >SMb21231 [M] COG0438 Glycosyltransferase Sme Sinorhizobium meliloti Length = 384 Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 99/318 (31%), Positives = 158/318 (49%), Gaps = 21/318 (6%) Query: 62 QIPFQRGQRAMLTAAAALKAIREVERAIKPSIVHHSGVQCCVFGSLAA----LDQRFPVV 117 QIP R L L +R ++P IV ++ ++ +AA + +R +V Sbjct: 63 QIPMARTGLNPLKDLRTLWTLRRHFARLQPDIVLPYTMKPIIYAGIAARTLGIKERCFLV 122 Query: 118 NAITGLGYIFTSS---SSQSRLLKRVLTRLLPWLLNRSRSYTIVQNPDD----REALMAL 170 TGLG+IF+ + S ++R ++ + RL L +R + + DD R ++ Sbjct: 123 ---TGLGHIFSEAAGASLKARAIRYLCVRLYRSALRGARVVFVYNDADDDDIRRYRMLQG 179 Query: 171 GAKPDRMTLIPGSGVDDESLQ-PLPEPAGPITIGFAGRLLVDKGIRTLVRAHGLLRDQGH 229 P T+I GSGVD + + P +GP T RLL DKG+ V A ++R Sbjct: 180 DLSP---TMISGSGVDLDHFEFSTPPRSGP-TFLMVARLLRDKGVFEYVEAARIVRRSFP 235 Query: 230 DINLIIAGNPDPANPSSVSHEEIEAWIARPGITWLGHIDNIASLWRASHIAALPSY-REG 288 + G+ D +NP+++S EEI+ W+ + +LG ++ A ++ LPSY REG Sbjct: 236 HARFQLLGHFD-SNPTAISREEIDGWVREGILDYLGTTVDVRPYLAACNVFVLPSYYREG 294 Query: 289 LPGALMEAAACGRPLIATDTPGCREIVLADQTGLLVPLEDPIALASAILRLAEAPELRAR 348 +P +++EA A GRP+I TD PGCR+ V G++V D ALA A+ A+ P+L Sbjct: 295 IPRSILEALATGRPVITTDLPGCRDTVQPGTNGMIVKPRDVAALADAMAAFAQDPDLAET 354 Query: 349 FGAAARRRVSERFSARII 366 FG +R +F +I Sbjct: 355 FGKRSRELAEAKFDVHMI 372 >NMB0218 [M] COG0438 Glycosyltransferase Nme Neisseria meningitidis MC58 Length = 376 Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 94/313 (30%), Positives = 148/313 (47%), Gaps = 20/313 (6%) Query: 67 RGQRAMLTAAAALKA----IREVERAIKPSIVHHSGVQCCVFGSLAALDQRFP-VVNAIT 121 R R+ L + +K+ +E+++ I P +V + +FG+ AA P +V + Sbjct: 57 RSNRSGLNPFSDIKSTFLIFKELKK-ISPDLVFPYFAKPVIFGTFAAKLAGVPRIVGMLE 115 Query: 122 GLGYIFTSSSS----QSRLLKRVLTRLLPWLLNRSRSYTIVQNPDDREALM-ALGAKPDR 176 GLG+ FT +++++K +L L L S IV NPDD++ L G K Sbjct: 116 GLGFAFTPQPEGIPLKTKIIKGILIALYRIALPMLES-LIVLNPDDKDELTDKYGIKIKN 174 Query: 177 MTLIPGSGVD----DESLQPLPEPAGPITIGFAGRLLVDKGIRTLVRAHGLLRDQGHDIN 232 + ++ G G+D S +P+ P+ F GR L +KGI +RA ++D+ D Sbjct: 175 IHILGGIGLDLRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDDFIRAAEQVKDKYPDTV 234 Query: 233 LIIAGNPDPANPSSVSHEEIEAWIARPGITWLGHIDNIASLWRASHIAALPSY-REGLPG 291 G D S ++E AR I + G ++N++ + + HI LPSY REG+P Sbjct: 235 FTALGAIDK---SRGGGGDLERLAARDIIRFPGFVNNVSEVIKEHHIFVLPSYYREGVPR 291 Query: 292 ALMEAAACGRPLIATDTPGCREIVLADQTGLLVPLEDPIALASAILRLAEAPELRARFGA 351 + EA A GR +I TD PGCRE V G L+ +P LA ++ E E G Sbjct: 292 STQEAMAVGRAVITTDVPGCRETVADKVNGFLIEPWNPRILAEKMIYFIENREAVRLMGN 351 Query: 352 AARRRVSERFSAR 364 A+ ++F A Sbjct: 352 ASYAIAKDKFDAE 364 >NMA0048 [M] COG0438 Glycosyltransferase NmA Neisseria meningitidis Z2491 Length = 377 Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 93/313 (29%), Positives = 148/313 (47%), Gaps = 19/313 (6%) Query: 67 RGQRAMLTAAAALKA----IREVERAIKPSIVHHSGVQCCVFGSLAALDQRFP-VVNAIT 121 R R+ L + +K+ +E+++ I P +V + +FG+ AA P +V + Sbjct: 57 RSNRSGLNPFSDIKSTFLIFKELKK-ISPDLVFPYFAKPVIFGTFAAKLAGVPRIVGMLE 115 Query: 122 GLGYIFTSSSS----QSRLLKRVLTRLLPWLLNRSRSYTIVQNPDDREALM-ALGAKPDR 176 GLG+ FT +++++K +L L L S IV NPDD++ L G K Sbjct: 116 GLGFAFTPQPEGIPLKTKIIKGILITLYRIALPMLES-LIVLNPDDKDELTDKYGIKIKN 174 Query: 177 MTLIPGSGVD----DESLQPLPEPAGPITIGFAGRLLVDKGIRTLVRAHGLLRDQGHDIN 232 + ++ G G+D S +P+ P+ F GR L +KGI +RA ++D+ D Sbjct: 175 IHILGGIGLDLRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDDFIRAAEQVKDKYPDTV 234 Query: 233 LIIAGNPDPANPSSVSHEEIEAWIARPGITWLGHIDNIASLWRASHIAALPSY-REGLPG 291 G D + ++E AR I + G ++N++ + + HI LPSY REG+P Sbjct: 235 FTALGAIDKSRGGGGG--DLERLAARDIIRFPGFVNNVSEVIKEHHIFVLPSYYREGVPR 292 Query: 292 ALMEAAACGRPLIATDTPGCREIVLADQTGLLVPLEDPIALASAILRLAEAPELRARFGA 351 + EA A GR +I TD PGCRE V G L+ +P LA ++ E E G Sbjct: 293 STQEAMAVGRAVITTDVPGCRETVADKVNGFLIEPWNPRILAEKMIYFIENREAIRLMGN 352 Query: 352 AARRRVSERFSAR 364 A+ ++F A Sbjct: 353 ASYAIAKDKFDAE 365