BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0154.0006.p (821 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc44_1 [T] COG2202 FOG Atu Agrobacterium tumefaciens strain C58... 364 e-100 SMc02756_1 [T] COG2202 FOG Sme Sinorhizobium meliloti 314 6e-85 mll5087_1 [T] COG2202 FOG Mlo Mesorhizobium loti 312 2e-84 BMEI2027_1 [T] COG2202 FOG Bme Brucella melitensis 310 9e-84 BMEI2027_2 [T] COG0642 Signal transduction histidine kinase Bme ... 273 2e-72 >AGc44_1 [T] COG2202 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 648 Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust. Identities = 218/602 (36%), Positives = 331/602 (54%), Gaps = 37/602 (6%) Query: 3 RTLLSCTSLARDGMIGLAITALLPARTS---FAAESLVTQAMSDHFGFNHQEVAVLATSL 59 R LLS T L + +A L+ A+TS F++ +T ++ V +L+ +L Sbjct: 68 RILLSGTVLTGSSTVAMAQDGLV-AKTSARLFSSGETITYSLF---------VGMLSATL 117 Query: 60 ALVGFSAVAAILLMRTRVRATRNEEQLQSEITDLQAQSD----RLRALLFVEPQVLISWA 115 FS V L+R R N E SE AQS + AL+ + + ++ W Sbjct: 118 ----FSVV---WLVRQR----GNIEAESSEYRQALAQSHHKIAKYEALISDKSRRIVIWD 166 Query: 116 AGDNRPQISGDISLVMSQEGSPQRVLAFGTWLPPEPALQMDHAVDALREKGEAFLLNLST 175 D RP+ G + + Q LAFG WL P A Q++ +++ LR ++F L + T Sbjct: 167 GVDKRPEFLGQLPAETGVPQADQDFLAFGRWLKPASAGQLEKSIEKLRSHAQSFDLTIET 226 Query: 176 SAGRAIEAMGRAIGGQAI--------VRRELAESNLRYKTLQEETELLRDFAAAAPWPIW 227 G IE GR GG A +R ELAE + + L ++ + P+W Sbjct: 227 QRGEVIEVQGRVSGGNAFARFIALNNLRAELAELQVERERLLASVSTFQELLDSIEQPVW 286 Query: 228 AKSLEGNLRYANAAYVRATEGRSVSDALQRNLELLESDQRTELTRALNDNANYAARLPIV 287 ++ EG L + N AY A + R+ A+Q ELL + R ++ A + Y R+ V Sbjct: 287 RRNGEGELTWVNHAYAHAVDARNAEQAVQEKRELLNTVTRQKIRAAATPESPYHDRISTV 346 Query: 288 VSGERRIYDVQALKLSGGSAGIAIDASEAAALRAAIARMVEAHRRTLDQLSSGVAVFDAD 347 VSG R +DV +K +GGSAGIAIDA+EA +R + R++++H TLD L++ VA+FD Sbjct: 347 VSGNRSFFDVVDIKTAGGSAGIAIDATEAETIREELKRVLKSHAETLDHLATPVAIFDGR 406 Query: 348 RRLTFYNESYRRLWGLDQAFLDGNPDDSSVLDRLRANRKLPEQPDFRAWKAKLHEAYRAV 407 +RL FYN+++ LWG D L+ PD+S +LDRLR+ KLPEQ +++ WK YR++ Sbjct: 407 QRLQFYNQAFASLWGFDLVLLESGPDNSELLDRLRSAGKLPEQLNWKNWKETALSVYRSL 466 Query: 408 ESETYTWFLPDGRAISVVTTPNLEGGVTYLFDNVTESLDLARRYDRLTRVQRETLDNLGE 467 +++T W LP+G+ + V+ T + +GG T++F+N+TE +DL RY+ L +VQ ET+D+L E Sbjct: 467 DTKTDLWHLPNGQTLRVIATAHPQGGATWVFENLTEQVDLQMRYNTLVKVQGETIDHLAE 526 Query: 468 AVAVFGSNGRAELFNPPFAKMWKLPADALQGEPHIEAVEALCRPLFDDALTWRTLREQIT 527 VAVFG++GR L NP F +W + AD + HI A+E C +D WR + IT Sbjct: 527 GVAVFGADGRIRLSNPAFRALWGVTADEAETGTHIRAIETACAQSYDGPDGWRAFSQFIT 586 Query: 528 AIEN-RAQVALKLERKDGSVLNCMTIPLPDGKTLLAFQDITDTENVERALRERNEALEAA 586 + ++ R LE G VL+ IPLPD +T+L F ++TD+ ERAL+E+N+AL A Sbjct: 587 SFDDERPSRQGTLELLSGLVLDYAIIPLPDAQTMLTFVNMTDSVRAERALKEKNDALLKA 646 Query: 587 DQ 588 D+ Sbjct: 647 DE 648 >SMc02756_1 [T] COG2202 FOG Sme Sinorhizobium meliloti Length = 530 Score = 314 bits (804), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 173/485 (35%), Positives = 266/485 (54%), Gaps = 14/485 (2%) Query: 47 FNHQEVAVLATSLALVGFSAVAAILLMRTRVRATRNEEQLQSEITDLQAQSDRLRALLFV 106 F EV + + ++ + ++AI L+R R +L+S ++D + R +AL+ Sbjct: 46 FGTSEVVTFSVLIGVISAAMISAIWLIRQRGNIEAENRELRSNLSDANQRISRFQALIAD 105 Query: 107 EPQVLISWAAGDNRPQISGDISLVMSQEGSPQR---VLAFGTWLPPEPALQMDHAVDALR 163 + + ++ W RP+ G + ++ G+PQ LAFG W+ P+ A Q++ A++ALR Sbjct: 106 KNRRIVIWDGLAERPEFLGQLP---AETGAPQDDRDFLAFGRWIKPQSAGQLEKAIEALR 162 Query: 164 EKGEAFLLNLSTSAGRAIEAMGRAIGGQAIVR--------RELAESNLRYKTLQEETELL 215 + ++F L L T +EA GR GG+A VR ELAE L L Sbjct: 163 AQAQSFDLVLETQRNEVLEAQGRVSGGRAFVRFIALNNLRAELAELKLERDQLHASLSTF 222 Query: 216 RDFAAAAPWPIWAKSLEGNLRYANAAYVRATEGRSVSDALQRNLELLESDQRTELTRALN 275 R A P W + +G L++ NAAY A E +S S A+ ELL + R + Sbjct: 223 RTLLDAVDLPAWQRGGDGRLQWVNAAYANAVETQSASTAVAEERELLATTARERIRAVST 282 Query: 276 DNANYAARLPIVVSGERRIYDVQALKLSGGSAGIAIDASEAAALRAAIARMVEAHRRTLD 335 + ++ VV G R +DV + GSAGIAID S A+R +AR +++H TL+ Sbjct: 283 LQTPFRDKVSTVVRGNRTFFDVVDARTPAGSAGIAIDVSGIEAVREELARTLKSHAETLE 342 Query: 336 QLSSGVAVFDADRRLTFYNESYRRLWGLDQAFLDGNPDDSSVLDRLRANRKLPEQPDFRA 395 L++ VA+FD ++RL FYN++++RLW LD FL+ PD+ VLDRLRA KLPEQ +++ Sbjct: 343 HLATPVAIFDGNQRLQFYNQAFQRLWDLDMGFLERKPDNGEVLDRLRAGGKLPEQLNWKQ 402 Query: 396 WKAKLHEAYRAVESETYTWFLPDGRAISVVTTPNLEGGVTYLFDNVTESLDLARRYDRLT 455 WK Y+A+++++ W LP+G+ + V T +GG T++F+N+TE +DL RY+ L Sbjct: 403 WKTSALSVYQAIDTQSDLWHLPNGQTLRVFATARPQGGATWVFENLTERVDLETRYNTLV 462 Query: 456 RVQRETLDNLGEAVAVFGSNGRAELFNPPFAKMWKLPADALQGEPHIEAVEALCRPLFDD 515 +VQ ET+D+L E VAVFG +GR L NP F +W + Q HI A+E C +D Sbjct: 463 QVQGETIDHLAEGVAVFGPDGRIRLSNPAFRAIWGISETEAQPGTHIRAIEQACLASYDQ 522 Query: 516 ALTWR 520 W+ Sbjct: 523 PDGWK 527 >mll5087_1 [T] COG2202 FOG Mlo Mesorhizobium loti Length = 554 Score = 312 bits (800), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 179/474 (37%), Positives = 261/474 (55%), Gaps = 14/474 (2%) Query: 47 FNHQEVAVLATSLALVGFSAVAAILLMRTRVRATRNEEQLQSEITDLQAQSDRLRALLFV 106 N EV LA + + G + ++AI+L+R R R + +L+S + D+ A R ALL + Sbjct: 70 INTVEVMQLAVFVGVTGAAFLSAIVLIRERARTSAENVELRSRVADINAALRRSEALLNL 129 Query: 107 EPQVLISWAAGDNRPQISGDISLVMSQEGSPQR---VLAFGTWLPPEPALQMDHAVDALR 163 Q ++ WA+ + +P++ G + + + G+P+ LAFG WL P A ++HA+ LR Sbjct: 130 RDQRVVVWASENKKPELIGTLPV---ESGAPEERSAFLAFGRWLMPRSAAALEHAIAGLR 186 Query: 164 EKGEAFLLNLSTSAGRAIEAMGRAIGGQAIVR----RELAESNLRYKT----LQEETELL 215 EK F L + + AG +E GR +VR E S R K L + + + Sbjct: 187 EKARPFDLVIESQAGAPLEVHGRKSAAHILVRFVSLSETQRSQARLKIDNQRLAADHDTM 246 Query: 216 RDFAAAAPWPIWAKSLEGNLRYANAAYVRATEGRSVSDALQRNLELLESDQRTELTRALN 275 A P W + G L++ N AY A E S A++ E L R + Sbjct: 247 IGLLEALKMPAWLRDEHGRLKWVNRAYADAVEAESAEAAVRDAREFLGGQAREAIDAQHK 306 Query: 276 DNANYAARLPIVVSGERRIYDVQALKLSGGSAGIAIDASEAAALRAAIARMVEAHRRTLD 335 + + L V+ G+RR++ V GSAG+A D S A+R R V +H TLD Sbjct: 307 THPVFEQSLSTVIEGDRRVFAVTDFASPDGSAGLAADTSAIEAIRGEYERTVRSHADTLD 366 Query: 336 QLSSGVAVFDADRRLTFYNESYRRLWGLDQAFLDGNPDDSSVLDRLRANRKLPEQPDFRA 395 QL++ VA+FD D +L F+N+++++LWGLD FL PD++ +LDRLR+ K+ EQP++R Sbjct: 367 QLNTAVAIFDTDEKLRFFNQAFQKLWGLDSGFLHSAPDNALLLDRLRSEGKIAEQPEWRR 426 Query: 396 WKAKLHEAYRAVESETYTWFLPDGRAISVVTTPNLEGGVTYLFDNVTESLDLARRYDRLT 455 WK L AYRAVES+ + W LPDG+ I VV P +GGVT++F+N+TE +DL RY Sbjct: 427 WKEGLLGAYRAVESQEHWWHLPDGKTIRVVANPQPKGGVTWVFENLTEKMDLESRYRTAV 486 Query: 456 RVQRETLDNLGEAVAVFGSNGRAELFNPPFAKMWKLPADALQGEPHIEAVEALC 509 RVQ ETLDNL E VAVFG +GR L NP FA +W L +A + H+ + LC Sbjct: 487 RVQGETLDNLAEGVAVFGPDGRLRLSNPAFATLWGLSGEAAKPNVHVSTIRDLC 540 >BMEI2027_1 [T] COG2202 FOG Bme Brucella melitensis Length = 481 Score = 310 bits (794), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 177/494 (35%), Positives = 268/494 (54%), Gaps = 24/494 (4%) Query: 62 VGFSAVAAILLMRTRVRATRNEEQLQSEITDLQAQSDRLRALLFVEPQVLISWAAGDNRP 121 +G + ++A L+R R + +L+S+ DL + R ALL ++ Q ++ W + R Sbjct: 1 MGAALLSAGWLIRDRSKIANENNELRSKFADLNLIAQRNEALLNMKDQRIVVWDGHNVRA 60 Query: 122 QISGDISLVMSQEGSPQR---VLAFGTWLPPEPALQMDHAVDALREKGEAFLLNLSTSAG 178 + G + G+PQ LAFG WL P+ ++ A+ LRE+ AF L + T G Sbjct: 61 DVVGQLPDAC---GAPQDRPAFLAFGRWLRPQSVTALERAISTLREQARAFDLTVETVNG 117 Query: 179 RAIEAMGRAIGGQAI--------VRRELAESNLRYKTLQEETELLRDFAAAAPWPIWAKS 230 ++ GR GG A+ V+ E A + + L + EL+R P W + Sbjct: 118 SLLDVHGRTSGGFAVACFQSLQGVQAERASLEAQNRELADRIELMRRLLDRIEQPAWLRD 177 Query: 231 LEGNLRYANAAYVRATEGRSVSDALQRNLELLESDQRTELTRALNDNANYAARLPIVVSG 290 G + + N AY +A + + S + EL + R L R +L VV G Sbjct: 178 GNGRIEWVNLAYAQAVDMANASQVISEGRELFGAQARQRLERDRFAEPVVQEQLTAVVHG 237 Query: 291 ERRIYDVQALKLSGGSAGIAIDASEAAALRAAIARMVEAHRRTLDQLSSGVAVFDADRRL 350 +RR++DV + GS G+ D +E A+R ++R +++H TLDQLS+ VA+FD + +L Sbjct: 238 DRRVFDVIDVSAESGSVGLGFDLTEVQAVRDELSRTLKSHAETLDQLSTAVAIFDPEMKL 297 Query: 351 TFYNESYRRLWGLDQAFLDGNPDDSSVLDRLRANRKLPEQPDFRAWKAKLHEAYRAVESE 410 F+N+++ +LWGLD A+L+ P ++ + DRLRA KLPEQP++R WK L AYRAVE E Sbjct: 298 QFFNQAFVKLWGLDVAWLETRPSNTLIFDRLRAEGKLPEQPEWRKWKDSLLSAYRAVEPE 357 Query: 411 TYTWFLPDGRAISVVTTPNLEGGVTYLFDNVTESLDLARRYDRLTRVQRETLDNLGEAVA 470 + W LPD R + VV P+ +GGVT+ F+N+TE +L RY+ L +VQ ETLD+L EAVA Sbjct: 358 EHMWHLPDTRTMRVVANPHPQGGVTWFFENMTEKFELEGRYNTLIKVQGETLDHLAEAVA 417 Query: 471 VFGSNGRAELFNPPFAKMWKLPADALQGEPHIEAVEALCRPLFDDALTWRTLREQITAIE 530 VFGS+GR L NP FA +W LP++ ++ HI + LC D L W +T Sbjct: 418 VFGSDGRLRLSNPSFAALWSLPSEMVREGTHISIIAKLCNQRGGDGL-WEDFVSTVTGF- 475 Query: 531 NRAQVALKLERKDG 544 L+++DG Sbjct: 476 --------LDQRDG 481 >BMEI2027_2 [T] COG0642 Signal transduction histidine kinase Bme Brucella melitensis Length = 287 Score = 273 bits (697), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 150/284 (52%), Positives = 201/284 (70%) Query: 538 KLERKDGSVLNCMTIPLPDGKTLLAFQDITDTENVERALRERNEALEAADQMKVDFVHHV 597 ++E DG++L+ +PLP G+T+L F D+TDT VERAL+E+NEALE ADQ+K DFV HV Sbjct: 4 QVELSDGAILSFAVVPLPKGQTMLTFIDVTDTVRVERALKEKNEALELADQIKNDFVQHV 63 Query: 598 SYELRAPLTTIIGFAHFLSDPSTGPLTPKQAEYLDYVTKSTNALLALTNNILDLATIDAG 657 SYELR+PLT IIGF L P+ G L +Q EYLD+++ S++ LL + N+ILDLAT+DAG Sbjct: 64 SYELRSPLTNIIGFTELLQTPAFGSLNERQLEYLDHISTSSSVLLTIVNDILDLATVDAG 123 Query: 658 AMKLELGPVNIGQAIEAAAEGIQDRLATDRITLKVDIEPDIGAFVGDERRVVQVLYNLLA 717 M+LE+G V++ +AI AAA + +RL I L VDI D+ F D RV QVL+NLL+ Sbjct: 124 IMELEIGDVSVVEAISAAASRVSERLRDHNIGLDVDIADDVDVFKADANRVRQVLFNLLS 183 Query: 718 NAVGFSPHDATVTISAHRTEHSVVFAVTDAGPGIPAEMRDKVFNWFESHSHGSRHRGAGL 777 NAV ++P + + + R VVFAV D G G+P+E+ D VF F+S+ +G R RGAGL Sbjct: 184 NAVNYAPEGSNIVLQVARDGADVVFAVHDDGHGMPSEVLDTVFKRFQSYPNGGRRRGAGL 243 Query: 778 GLSLVRSFVELHGGRVRVDSTVGRGTTVTCDFPIDQTAHRNAAE 821 GL++V+SFVELHGGRV +D+ RGTTV C FP + + R AAE Sbjct: 244 GLAIVKSFVELHGGRVEIDTGEERGTTVICRFPSEARSFRAAAE 287