BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0153.0007.p         (211 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

aq_903 [FJ] COG0590 Cytosine/adenosine deaminases Aae Aquifex ae...    89   9e-18
NMA1129 [FJ] COG0590 Cytosine/adenosine deaminases NmA Neisseria...    86   6e-17
NMB0933_2 [FJ] COG0590 Cytosine/adenosine deaminases Nme Neisser...    85   1e-16
VC0864 [FJ] COG0590 Cytosine/adenosine deaminases Vch Vibrio cho...    83   5e-16
MA3407 [FJ] COG0590 Cytosine/adenosine deaminases Mac Methanosar...    81   2e-15

>aq_903 [FJ] COG0590 Cytosine/adenosine deaminases Aae Aquifex aeolicus
          Length = 151

 Score = 88.6 bits (218), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)

Query: 13  FMQRCVSLAHSGMAKGEYPFAAVISRKGRFVCEAHNMVRCEGDVTRHAEMVALSEAQRTL 72
           F++  +  A     KGE P  A+I ++G  + +AHN V    D T HAEM+A+ EA R L
Sbjct: 6   FLKVALREAKRAFEKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRL 65

Query: 73  KTTSLEDCTLYSTVEPCAMCAYAIRESRVGRVI-SGLRSPVMGGHSRWDILTDSGLS 128
            T  LE C LY T+EPC MC+YA+  SR+ +VI S L     G  S ++IL +  L+
Sbjct: 66  NTKYLEGCELYVTLEPCIMCSYALVLSRIEKVIFSALDKKHGGVVSVFNILDEPTLN 122


>NMA1129 [FJ] COG0590 Cytosine/adenosine deaminases NmA Neisseria
           meningitidis Z2491
          Length = 148

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 1/118 (0%)

Query: 13  FMQRCVSLAHSGMAKGEYPFAAVISRKGRFVCEAHNMVRCEGDVTRHAEMVALSEAQRTL 72
           FM   +  A    A GE P  AVI   G+ +  AHN    + +V+RHAE+ AL++A R +
Sbjct: 4   FMCEALRQAEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGREM 63

Query: 73  KTTSLEDCTLYSTVEPCAMCAYAIRESRVGRVISGLRSPVMGGH-SRWDILTDSGLSS 129
           +   L+ C +Y T+EPCAMCA A+ ++RV RVI G   P  G   S  ++  D  L++
Sbjct: 64  QNYRLDGCDIYITLEPCAMCASALIQARVKRVIYGAGEPKTGAAGSIVNLFADKRLNT 121


>NMB0933_2 [FJ] COG0590 Cytosine/adenosine deaminases Nme Neisseria
           meningitidis MC58
          Length = 152

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 1/118 (0%)

Query: 13  FMQRCVSLAHSGMAKGEYPFAAVISRKGRFVCEAHNMVRCEGDVTRHAEMVALSEAQRTL 72
           FM   +  A    A GE P  AVI   G+ +  AHN    + +V+RHAE+ AL++A R +
Sbjct: 8   FMCEALRQAEQSSADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGREI 67

Query: 73  KTTSLEDCTLYSTVEPCAMCAYAIRESRVGRVISGLRSPVMGGH-SRWDILTDSGLSS 129
           +   L+ C +Y T+EPCAMCA A+ ++R+ RVI G   P  G   S  ++  D  L++
Sbjct: 68  QNYRLDGCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNT 125


>VC0864 [FJ] COG0590 Cytosine/adenosine deaminases Vch Vibrio cholerae
          Length = 193

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 57/102 (55%)

Query: 6   FTAPDIGFMQRCVSLAHSGMAKGEYPFAAVISRKGRFVCEAHNMVRCEGDVTRHAEMVAL 65
           F+A D  FM+R + LA    A+GE P  AV+ R G  + E  N      D T HAE+  +
Sbjct: 24  FSAQDEQFMRRAIVLAAQAEAQGEVPVGAVLVRDGEIIAEGWNGSITNHDATAHAEIEVI 83

Query: 66  SEAQRTLKTTSLEDCTLYSTVEPCAMCAYAIRESRVGRVISG 107
            +A + L    L D TLY T+EPC MCA A+  SRV R++ G
Sbjct: 84  RKAGKALSNYRLLDTTLYVTLEPCPMCAGALLHSRVKRIVYG 125


>MA3407 [FJ] COG0590 Cytosine/adenosine deaminases Mac Methanosarcina
           acetivorans str.C2A
          Length = 162

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 59/105 (56%)

Query: 1   MTSLDFTAPDIGFMQRCVSLAHSGMAKGEYPFAAVISRKGRFVCEAHNMVRCEGDVTRHA 60
           M   + +  D  FM+R + L+   + KG  PF AVI++ G+ + E+ N V    D T HA
Sbjct: 1   MREKNMSEKDTLFMRRAIELSLESVKKGGGPFGAVITKNGKIISESCNQVTVLNDPTAHA 60

Query: 61  EMVALSEAQRTLKTTSLEDCTLYSTVEPCAMCAYAIRESRVGRVI 105
           E+ A+ EA R L    L+ C +Y++ EPC MC  AI  +R+ RV 
Sbjct: 61  EISAIREAARKLNAPDLKGCEIYASCEPCPMCLGAIYWARIDRVF 105