BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0152.0033.p (318 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MA4250 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel trans... 183 5e-46 BH1797 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel trans... 164 4e-40 BMEII0209 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tr... 162 8e-40 PAB0092 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran... 160 3e-39 mlr6289 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran... 158 2e-38 >MA4250 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Mac Methanosarcina acetivorans str.C2A Length = 315 Score = 183 bits (464), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 111/305 (36%), Positives = 176/305 (57%), Gaps = 13/305 (4%) Query: 22 VVWAAATFAFLTQC------LLPGDRAQIIINVRSGNVGPAPPAELAAVNAQYGFDQPLV 75 +V+ A F F++ + PGD A+II+ SG PA E + GFD+PL Sbjct: 9 IVFMAPVFLFISIVSFSLIYVTPGDPAEIILTSSSGGADPAAVEEF---RIKEGFDKPLY 65 Query: 76 VQYANYIWRILHGDLGESYQQHRPVVGIIAEQIGPTIVLAIAALLTAWAIAILATLLIAG 135 VQY N++ +LHG+LG SY RPV I + T+ LAIA+ L + I+I A +L A Sbjct: 66 VQYLNWLGDVLHGELGYSYMSERPVSEAILQAFSATLKLAIASFLVSLVISIPAGILAAL 125 Query: 136 RDNIWSKLLSGAQIFLA-TVPPYWLATILLVVFAVNLRIFPVVG---ESTAMGLVLPSLA 191 + + W LS L ++P +W ++++VFAV LRI P G + L+LP L Sbjct: 126 KRDTWIDDLSRLFALLGVSMPNFWQGYLMILVFAVFLRILPAGGFGENGDFLHLILPMLT 185 Query: 192 LALELSGFFGQVVLNEFTRVLEQPFVTSARARGMSDFGVRLHHVLRHAALPGITLSGWAL 251 L + ++ + F VL++ ++ +ARA+G+S+ V H L++A +P IT++G Sbjct: 186 LGTSSAAITMRLTRSSFLEVLQEDYIYAARAKGLSEKVVIGKHALKNAMIPVITMAGLNF 245 Query: 252 GKLLSGAILIEIVFARQGLGGVLVAATSSRDVPIVSGAVLISAGLFVLLSVIVDLAYRML 311 G LL+G+ ++E VFA GLG ++V + +RD P++ G +L A LFV ++++VDL+Y L Sbjct: 246 GYLLNGSAVVETVFAWPGLGNLIVNSIYNRDYPMIQGTLLFVAVLFVTINLLVDLSYSYL 305 Query: 312 DPRMK 316 DPR++ Sbjct: 306 DPRIR 310 >BH1797 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Bha Bacillus halodurans Length = 315 Score = 164 bits (414), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 104/307 (33%), Positives = 170/307 (55%), Gaps = 4/307 (1%) Query: 12 FARRILSGVVVVWAAATFAFLTQCLLPGDRAQIIINVRSGNVGPAPPAELAAVNAQYGFD 71 F RR+L + V +FL L PGD I+NV +V E+ + GF+ Sbjct: 5 FIRRLLEVALFVLFVTFVSFLFVRLAPGDPVLTILNVDELSVSQE---EVETLREDMGFN 61 Query: 72 QPLVVQYANYIWRILHGDLGESYQQHRPVVGIIAEQIGPTIVLAIAALLTAWAIAILATL 131 +PL+VQY +++ + D G SY +PV+ +I + + T+ L + +L+ ++I Sbjct: 62 KPLLVQYGHWLLDFVRLDFGVSYVTGQPVMDMIMKGLPATLELTVGSLIVMLIVSIPLGS 121 Query: 132 LIAGRDNIWSKLLSGAQIFL-ATVPPYWLATILLVVFAVNLRIFPVVGESTAMGLVLPSL 190 L A N W LS L A +P +WL I + +FAV L P +G + L+LPS+ Sbjct: 122 LAALYRNRWIDHLSRILAILGAAIPSFWLGLIFIDLFAVRLNWLPTMGRDGFVSLILPSV 181 Query: 191 ALALELSGFFGQVVLNEFTRVLEQPFVTSARARGMSDFGVRLHHVLRHAALPGITLSGWA 250 L L +S + +++ + L Q F+ +ARARG+S+ + + H LRH+ P IT+ G + Sbjct: 182 TLGLAISSVYVRLLRSSLLDSLSQEFIRAARARGLSEKRIFVAHALRHSLPPVITVFGVS 241 Query: 251 LGKLLSGAILIEIVFARQGLGGVLVAATSSRDVPIVSGAVLISAGLFVLLSVIVDLAYRM 310 LG L+ G ++IE++FA G+G ++V A RD P++ G +L+ A + +++ VDL+YR Sbjct: 242 LGSLIGGVVVIEVLFAYPGIGKLVVDAIRQRDYPLIQGYILVMALIVFVINTSVDLSYRY 301 Query: 311 LDPRMKL 317 L+P MKL Sbjct: 302 LNPEMKL 308 >BMEII0209 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Bme Brucella melitensis Length = 315 Score = 162 bits (411), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 176/312 (56%), Gaps = 15/312 (4%) Query: 14 RRILSGVVVVWAAATFAFLTQCLLPGDRAQIIINVRSGNVGPAPPAELAAVNAQYGFDQP 73 +R+ + V+ A FL LLPGD A +I +G+ A P + + + G DQP Sbjct: 8 KRVAQAIPVMLIVAILTFLLMKLLPGDPAILI----AGD--GASPETVERIRVELGLDQP 61 Query: 74 LVVQYANYIWRILHGDLGESYQQHRPVVGIIAEQIGPTIVLAIAALLTAWAIAILATLLI 133 VVQ ++W + H DLG S+ +PV IAE++ TI LA+ A + I+ ++ Sbjct: 62 TVVQLGQWLWNLFHFDLGRSFLLSQPVSQAIAERLPVTISLALLAFAITIPVGIIMGVVA 121 Query: 134 AG-RDNIWSKLLSGAQIFLATVPPYWLATILLVVFAVNLRIFPVVGE----STAMG---- 184 A RD+ + + + +VP +WLA + +++F+V L FP G + +G Sbjct: 122 AYLRDSWFDTGVMSLALLGVSVPSFWLAILAVILFSVTLGWFPSAGYVPFLDSPLGWLRS 181 Query: 185 LVLPSLALALELSGFFGQVVLNEFTRVLEQPFVTSARARGMSDFGVRLHHVLRHAALPGI 244 L+LP+ LAL G+ ++ +E V++Q ++ +AR++G+S++ V H R+A + + Sbjct: 182 LILPASILALFQIGYLARMTRSEMLEVMDQDYIRTARSKGVSEYSVLSTHAFRNALVSVL 241 Query: 245 TLSGWALGKLLSGAILIEIVFARQGLGGVLVAATSSRDVPIVSGAVLISAGLFVLLSVIV 304 T+SG+ L+ G+++IE +FA GLG +LV A +RD+P+V G +L LFV ++V+V Sbjct: 242 TVSGYIFSLLIGGSVVIEQIFALPGLGRLLVQAILARDLPVVQGTMLFLGFLFVAINVLV 301 Query: 305 DLAYRMLDPRMK 316 D+ Y + DPR++ Sbjct: 302 DILYTIADPRVR 313 >PAB0092 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Pab Pyrococcus abyssi Length = 310 Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 166/308 (53%), Gaps = 7/308 (2%) Query: 11 WFARRILSGVVVVWAAATFAFLTQCLLPGDRAQIIINVRSGNVGPAPPAELAAVNAQYGF 70 W ++ILS ++ ++ + F+F L+PGD A+ ++ A +LA Q G Sbjct: 5 WIIKKILSLLIPIFIVSVFSFSILHLIPGDPARYLLGEF------ATEEQLAKFRHQLGL 58 Query: 71 DQPLVVQYANYIWRILHGDLGESYQQHRPVVGIIAEQIGPTIVLAIAALLTAWAIAILAT 130 D+PL +QY +++ ++L GD G S Q PV +IA ++ T+ L + A + AW ++ Sbjct: 59 DRPLYIQYIDWMSKVLRGDFGTSLVQGVPVSELIAGRLSYTLKLTVTAWIIAWVFGLVFG 118 Query: 131 LLIA-GRDNIWSKLLSGAQIFLATVPPYWLATILLVVFAVNLRIFPVVGESTAMGLVLPS 189 +L A + ++ ++ +F ++P +WL +L+++F V L I P+ G L+LPS Sbjct: 119 MLAAVYKHTLFDYIVMTLAVFFMSMPYFWLGILLILIFGVKLGILPISGPGDWRHLILPS 178 Query: 190 LALALELSGFFGQVVLNEFTRVLEQPFVTSARARGMSDFGVRLHHVLRHAALPGITLSGW 249 L L L ++ VLE+ ++ +ARA+G+ + V H LR+A +P +T Sbjct: 179 LTLGLPQVAVIARLTRANMLDVLEKDYIMTARAKGLPERMVVYKHALRNALIPLVTYMFL 238 Query: 250 ALGKLLSGAILIEIVFARQGLGGVLVAATSSRDVPIVSGAVLISAGLFVLLSVIVDLAYR 309 + L GA++ E VF G+G +LV A RD P+V VLI L V+ + + D+ Y Sbjct: 239 QIPWLFGGAVVTETVFGWPGMGNLLVMAIFQRDYPVVQAIVLIIGVLTVIANFLADITYT 298 Query: 310 MLDPRMKL 317 ++DPR+++ Sbjct: 299 IIDPRVRI 306 >mlr6289 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Mlo Mesorhizobium loti Length = 314 Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 109/318 (34%), Positives = 175/318 (55%), Gaps = 17/318 (5%) Query: 11 WFARRILSGVVVVWAAATFAFLTQCLLPGDRAQIIINVRSGNVGPAPPAELAAVNAQYGF 70 + R+LS + V+ F L PGD A ++ +G+ A PA++AA+ + Sbjct: 4 YLITRMLSIIPVMGVVTAVVFGLTYLSPGDAAVVL----AGDY--ASPAQIAAIRERLHL 57 Query: 71 DQPLVVQYANYIWRILHGDLGESYQQHRPVVGIIAEQIGPTIVLAIAALLTAWAIAILAT 130 D P+V QY +++ +L GDLG S +PV+ +I ++ PTI+LAIAA L + IA+ Sbjct: 58 DAPIVPQYFHWLGSVLRGDLGNSIFSEQPVLALILSRVEPTIILAIAATLVSVIIAVPLG 117 Query: 131 LLIA-GRDNIWSKLLSGAQIFLATVPPYWLATILLVVFAVNLRIFPVVG----ESTAMGL 185 LL A R I +L+S I +P + + +L+ F V P+ G +S A Sbjct: 118 LLAARKRGGIADQLVSFFGIAGTAIPAFLIGYLLIFTFGVYFGSMPISGFPGLDSGAWE- 176 Query: 186 VLPSLALALELSGFFGQVVLNEFTR-----VLEQPFVTSARARGMSDFGVRLHHVLRHAA 240 VL + L + GF ++ TR VL Q F+ ARA+G+ +F + + H LR A Sbjct: 177 VLRHVLLPATMLGFAQTALITRITRASAIEVLNQDFIRVARAKGLDEFTIIMRHCLRLIA 236 Query: 241 LPGITLSGWALGKLLSGAILIEIVFARQGLGGVLVAATSSRDVPIVSGAVLISAGLFVLL 300 +P +T+ G + +L G ++ E VFA G+G +LV A +DVP++ G +LIS+ ++VL+ Sbjct: 237 VPLVTIVGMSFAYMLGGVVITETVFAIPGVGRLLVDAIQHKDVPVIQGVLLISSFVYVLI 296 Query: 301 SVIVDLAYRMLDPRMKLT 318 +++VDL+Y DPR+K T Sbjct: 297 NLMVDLSYLFFDPRIKYT 314