BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0152.0031.p (367 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGl2773 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet... 276 7e-74 AGpT154 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet... 273 6e-73 AGl2922 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet... 271 2e-72 mll9178 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet... 268 1e-71 BS_yxeK [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet... 265 1e-70 >AGl2773 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 450 Score = 276 bits (705), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 156/360 (43%), Positives = 217/360 (60%), Gaps = 9/360 (2%) Query: 2 VLSVIARETERIGLIATASTTYNEPYNLARRFQSLDVISGGRVAWNAVTTSNSATAANFG 61 +L+ +A TE+IG IATASTTY EPYNLAR S+D ISGGRV WN VTTS A A NF Sbjct: 80 MLAALAAVTEKIGFIATASTTYYEPYNLARLLASVDHISGGRVGWNIVTTSADAAAGNFN 139 Query: 62 -GHEIARADRYRRAEDFVETVRALWLSWGDEMIIADQAAGVYADQRQFRLLDPATNS--- 117 ADRYR+A +FVE V LW SW D+ I+AD+ +G++AD + + PA++ Sbjct: 140 LQQHPPHADRYRQATEFVEVVTKLWDSWEDDAIVADRESGLFADTDR---IHPASHDGEF 196 Query: 118 FGIRGPLTHPASSQGHPVIVQAGGSEPGLRLGARSADVVFAAAGDLATALQEAARLRALS 177 + +RG L P S QG PV VQAG SE G AR A+ +F A L +A + ++ Sbjct: 197 YRVRGALNLPRSPQGRPVYVQAGSSEDGRGFAARYAEAIFTAHQTLESARSFYSDIKRRV 256 Query: 178 RQFGRSAAPL-ILPGLVTCIGGTEEEAARRKEQLDELLDLERAVAALARSMGVAVEKLSL 236 GR+ A + ILPG+ I TEEEA + + ++L+ ++ L R G+ + L Sbjct: 257 AATGRNPAHVKILPGISPFIASTEEEARKLEASFNDLIQPAFSLGQLQRITGIDLSSADL 316 Query: 237 ERTIPQEILPDADKVPFSVGHHRTIEVLARQGRTVREIISAVQA-FGHRLIVGAPEQIAD 295 ++ +P+E + S H ++V+ R+ T+R+++ + GH++I G PEQ+AD Sbjct: 317 DQPLPKEAVEATRAQADSSRHQLVLDVIDRENPTIRQLLHRLAGGRGHKVISGTPEQVAD 376 Query: 296 SIEAWFRAGAVDGFNIIPDVLTDGTPAFVDNVVPILQKRGLFRREYRGQTLREHFGISIP 355 IE WFR GA DGFNI+P L G FVD VVPIL++RGLFR +Y G TLR+H+G+ P Sbjct: 377 WIETWFREGAADGFNIMPPWLNGGFDIFVDEVVPILKQRGLFREDYEGDTLRDHYGLPRP 436 >AGpT154 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 430 Score = 273 bits (697), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 152/354 (42%), Positives = 206/354 (58%), Gaps = 3/354 (0%) Query: 1 LVLSVIARETERIGLIATASTTYNEPYNLARRFQSLDVISGGRVAWNAVTTSNSATAANF 60 L LS IA TE +GLIAT STT++EPY LAR+ SLD ISGGR AWN VT+ NF Sbjct: 76 LALSAIAARTESVGLIATVSTTFSEPYELARKLSSLDHISGGRAAWNIVTSYLPEAGWNF 135 Query: 61 GGHEIARADRYRRAEDFVETVRALWLSWGDEMIIADQAAGVYADQRQFRLLDPATNSFGI 120 G +RY RAE+FV +ALW SWGD ++ DQA G + D ++ L+ F + Sbjct: 136 GMDLPTHDERYDRAEEFVSVAKALWASWGDGALLLDQAGGTFVDWKKVSHLNHVGMHFKV 195 Query: 121 RGPLTHPASSQGHPVIVQAGGSEPGLRLGARSADVVFAAAGDLATALQEAARLRALSRQF 180 RGPL P S QG P++VQAG SE GL GAR AD++++ +L A R + R+ Sbjct: 196 RGPLQVPTSPQGKPILVQAGSSEVGLSFGARHADLIYSLQTNLEAAQAGYRRTKDAVRKA 255 Query: 181 GRSAA-PLILPGLVTCIGGTEEEAARRKEQLDELLDLERAVAALARSMGVAVEKLSLERT 239 GR L +PG+ +G TEEEA R+ E+LD L DL +GV + L++ Sbjct: 256 GRDPDRTLFMPGIYPVVGSTEEEALRKVERLDALRDLAADARWFGIRLGVPLGGEDLDKP 315 Query: 240 IPQEILPDADKVPFSVGHHRTIEVLARQ-GRTVREIISAVQAFGHRLIVGAPEQIADSIE 298 P D + T +++ R+ G T+REI+ + Q +R I G PE++AD IE Sbjct: 316 APTRAQADFTPAVSTGISESTWQMIERRPGATLREILLSSQG-RNRFIAGTPEKVADEIE 374 Query: 299 AWFRAGAVDGFNIIPDVLTDGTPAFVDNVVPILQKRGLFRREYRGQTLREHFGI 352 WFR+GA DGFN+ DG +F ++V+PILQ+RG+FR EYR TLR + G+ Sbjct: 375 LWFRSGAADGFNVSATHFPDGFSSFTESVIPILQRRGIFRSEYRHSTLRGNLGL 428 >AGl2922 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 436 Score = 271 bits (693), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 146/356 (41%), Positives = 213/356 (59%), Gaps = 6/356 (1%) Query: 2 VLSVIARETERIGLIATASTTYNEPYNLARRFQSLDVISGGRVAWNAVTTSNSATAANFG 61 +L+ +A T++IGL ATASTTY EPY+ AR F S+D +S GR AWN VTTS + TAANF Sbjct: 81 LLAALAMVTDKIGLAATASTTYGEPYHTARAFASIDHLSHGRAAWNIVTTSYARTAANFS 140 Query: 62 GHEIARADRYRRAEDFVETVRALWLSWGDEMIIADQAAGVYADQRQFRLLDPATNSFGIR 121 +RY AE++V VR LW SW D+ + D+ AG Y D + +LD F ++ Sbjct: 141 KSHPEHDERYAVAEEYVNVVRGLWDSWDDDAFVKDKQAGRYVDPEKVHILDHEGKYFTVK 200 Query: 122 GPLTHPASSQGHPVIVQAGGSEPGLRLGARSADVVFAAAGDLATALQEAARLRALSRQFG 181 GPL P S QGHPV++QAG S PG L AR+AD+VF A ++ A L+A +FG Sbjct: 201 GPLNIPRSPQGHPVLIQAGSSGPGQDLAARTADIVFTAQQAISEAQAFYTSLKARVAKFG 260 Query: 182 RSAAPL-ILPGLVTCIGGTEEEAARRKEQLDELLDLERAVAALARSMGVAVEKLSLERTI 240 R A + ++PG + IG + EEA + ++L+ D++ A+ L +G ++ L+ + Sbjct: 261 RDPASVAVMPGFMPIIGRSFEEAGEKLKELNRWTDIKNAMPLLEERIGHSLADYDLDGPL 320 Query: 241 PQEILPDADKVPFSVGHHRTIEVLARQGRTVREIISAVQA-FGHRLIVGAPEQIADSIEA 299 P LP +D++ E+ R+ T+RE+ V A GH +++G +++AD ++ Sbjct: 321 PD--LPISDQLRSRA--ELLTELARREKLTIRELALRVAAGRGHHIVMGTAKEVADRMQQ 376 Query: 300 WFRAGAVDGFNIIPDVLTDGTPAFVDNVVPILQKRGLFRREYRGQTLREHFGISIP 355 WF GA DGFN++P G F VVP+LQ+RGLFR++Y G TLR+H GI+ P Sbjct: 377 WFENGAADGFNVMPPFFPGGLEEFNREVVPLLQERGLFRKDYEGSTLRDHLGIARP 432 >mll9178 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Mlo Mesorhizobium loti Length = 448 Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 146/356 (41%), Positives = 214/356 (60%), Gaps = 3/356 (0%) Query: 3 LSVIARETERIGLIATASTTYNEPYNLARRFQSLDVISGGRVAWNAVTTSNSATAANFG- 61 +S +A T+RIG IATASTTYNEPYNLAR F S+D +SGGR WN VTT +++ A NFG Sbjct: 81 ISALAAVTQRIGFIATASTTYNEPYNLARLFASVDHLSGGRAGWNIVTTGDASAALNFGF 140 Query: 62 GHEIARADRYRRAEDFVETVRALWLSWGDEMIIADQAAGVYADQRQFRLLDPATNSFGIR 121 ADRY RA +FV+ V LW S D+ +++D+A+G++AD + ++ ++ Sbjct: 141 DRHPTHADRYERAGEFVDVVTKLWDSCEDDALVSDRASGIFADTDKIHPINHIGKYHRVK 200 Query: 122 GPLTHPASSQGHPVIVQAGGSEPGLRLGARSADVVFAAAGDLATALQEAARLRALSRQFG 181 GPLT P S QG PV VQAG SE G +R A+ +F A L A + A ++A + G Sbjct: 201 GPLTLPRSPQGRPVYVQAGSSEDGRSFASRYAEAIFTAHQTLGNAQEFYADIKARVKSVG 260 Query: 182 RSAAPL-ILPGLVTCIGGTEEEAARRKEQLDELLDLERAVAALARSMGVAVEKLSLERTI 240 R+ + +LPG+ IG TE EA ++ +EL E ++ L R + + +L+ Sbjct: 261 RNPDHVKVLPGISPFIGSTEAEARALHDEFNELTQPEYSLDQLRRIVDADLSGYNLDGPF 320 Query: 241 PQEILPDADKVPFSVGHHRTIEVLARQGRTVREIISAVQ-AFGHRLIVGAPEQIADSIEA 299 P+E++ + S H ++++ R+ T+R+++ + A GH + G P+QIAD I+ Sbjct: 321 PRELISVEGERGASSRFHVVLDIIERENPTIRQLLHRLAGARGHWVQAGTPDQIADKIQE 380 Query: 300 WFRAGAVDGFNIIPDVLTDGTPAFVDNVVPILQKRGLFRREYRGQTLREHFGISIP 355 WF GA DGFN++P L G F + VVPIL++RGLFR +Y G TLR+HFG+ P Sbjct: 381 WFDNGAADGFNVMPPYLQGGFDVFPEEVVPILRRRGLFRHDYDGATLRDHFGLPRP 436 >BS_yxeK [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases Bsu Bacillus subtilis Length = 441 Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 143/359 (39%), Positives = 215/359 (59%), Gaps = 8/359 (2%) Query: 2 VLSVIARETERIGLIATASTTYNEPYNLARRFQSLDVISGGRVAWNAVTTSNSATAANFG 61 +LS +A+ T +IGL ATASTTY+EP+++AR+F SLD +S GR WN VT+S +TA NF Sbjct: 80 LLSALAQVTSKIGLTATASTTYSEPFHIARQFASLDHLSNGRAGWNVVTSSIESTALNFS 139 Query: 62 GHE-IARADRYRRAEDFVETVRALWLSWGDEMIIADQAAGVYADQRQFRLLDPATNSFGI 120 G + + RY+RAE+FVE V+ LW SW ++ I ++ G + D+ + L+ F + Sbjct: 140 GEKHLEHHLRYQRAEEFVEIVKGLWDSWEEDAFIRNKETGEFFDKEKMHELNHKGEYFSV 199 Query: 121 RGPLTHPASSQGHPVIVQAGGSEPGLRLGARSADVVFAAAGDLATALQEAARLRALSRQF 180 RGPL + QG PVI+QAG S G L A++A+V+F A L +A + ++ + +F Sbjct: 200 RGPLNVSRTPQGQPVIIQAGSSGDGKALAAKTAEVIFTAQNHLESAQEFYQSIKEQAAEF 259 Query: 181 GRSAAPL-ILPGLVTCIGGTEEEAARRKEQLDELLDLERAVAALARSMG-VAVEKLSLER 238 GR + I+PG+ I TEE A + ++L +L+ + L +G + + L+ Sbjct: 260 GRDPEKIAIMPGIFPIIADTEEAAQAKYKELQDLIIPSVGLQILQNYLGGIDLSAYPLDG 319 Query: 239 TIPQEILPDADKVPFSVGHHRTIEVLA-RQGRTVREIISAVQ-AFGHRLIVGAPEQIADS 296 +P+ DA+ + ++ +A R T+RE+ V + GH + VG PEQ+AD Sbjct: 320 PLPK---LDAEASNAVKSRFKLVQEMAERDNMTIRELYKYVAGSRGHHIFVGTPEQLADK 376 Query: 297 IEAWFRAGAVDGFNIIPDVLTDGTPAFVDNVVPILQKRGLFRREYRGQTLREHFGISIP 355 ++ W A DGFNI+P +L +G FVD VVPILQ+RG+FR+EY G TLREHFG+ P Sbjct: 377 MQEWVDTKACDGFNIMPPLLPEGIEVFVDQVVPILQERGVFRKEYEGTTLREHFGLEKP 435