BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0152.0024.p (263 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1341 [E] COG0765 ABC-type amino acid transport system, permeas... 233 3e-61 RSc0482 [E] COG0765 ABC-type amino acid transport system, permea... 231 1e-60 ZgltJ [E] COG0765 ABC-type amino acid transport system, permease... 208 1e-53 ECs0693 [E] COG0765 ABC-type amino acid transport system, permea... 208 1e-53 gltJ [E] COG0765 ABC-type amino acid transport system, permease ... 207 2e-53 >PA1341 [E] COG0765 ABC-type amino acid transport system, permease component Pae Pseudomonas aeruginosa Length = 248 Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 115/234 (49%), Positives = 161/234 (68%), Gaps = 2/234 (0%) Query: 3 GVLLERT-MDGQRYIDWFLSGLGWTLALAFFGWWIAFAIGIVVGVGRTVHNPFFRALARL 61 GV + T + + Y+DW+++GLGWT+A+A GW IA A+G ++GV RTV N +A Sbjct: 8 GVFFKSTGIGSETYLDWYIAGLGWTIAIALVGWIIALALGSLLGVMRTVPNRLVSGIATA 67 Query: 62 YVEIFRNIPVLVQMFLWYFVLPELLPTTMGDWIKQ-IPPPWGSFFPALWCLGLYTAARIA 120 YVEIFRN+P+LVQ+F+WYF++P+LLP + W KQ + P ++ + CLGL+TAAR+ Sbjct: 68 YVEIFRNVPLLVQLFIWYFLVPDLLPEGLQTWFKQDLNPTTSAYLSVVVCLGLFTAARVC 127 Query: 121 EQVRAGIEALPNGQHEAAAALGLSGYQTYRHIILPQALRLIVPSLTSEVMGVYKNTSVAL 180 EQVR GI+ALP GQ AA A+G Q YRH++LPQA R+I+P LTSE + ++KN+SVA Sbjct: 128 EQVRTGIQALPYGQTSAARAMGFRLPQIYRHVLLPQAFRIIIPPLTSEFLNIFKNSSVAS 187 Query: 181 TIGLMELTAQARQISDATFQTFTAFGAATLIYLALALIAYQTMMLIDKAVRIPG 234 IGLMEL AQ +Q ++ + F AF ATLIY L + M L+++ V +PG Sbjct: 188 LIGLMELLAQTKQTAEFSANLFEAFTLATLIYFTLNMSLMLIMRLVERKVAVPG 241 >RSc0482 [E] COG0765 ABC-type amino acid transport system, permease component Rso Ralstonia solanacearum Length = 242 Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 116/237 (48%), Positives = 156/237 (65%), Gaps = 2/237 (0%) Query: 3 GVLLERTMDGQRYIDWFLSGLGWTLALAFFGWWIAFAIGIVVGVGRTVHNPFFRALARLY 62 GV Q Y+DW LSGL T+AL W IA +G V+GV RTV + LA Y Sbjct: 8 GVFFTEAAQNQTYLDWLLSGLKTTIALGLSSWIIALVLGSVLGVLRTVPSKALSGLATAY 67 Query: 63 VEIFRNIPVLVQMFLWYFVLPELLPTTMGDWIKQIPPPWGSFFPALWCLGLYTAARIAEQ 122 VE+FRNIP++VQ+F+WYFV+PEL+P GD+IKQ+ P F A+ CLG +TAAR+ EQ Sbjct: 68 VELFRNIPLIVQLFIWYFVMPELVPG--GDYIKQMNPATAMFLCAMLCLGTFTAARVCEQ 125 Query: 123 VRAGIEALPNGQHEAAAALGLSGYQTYRHIILPQALRLIVPSLTSEVMGVYKNTSVALTI 182 VR+GI +LP GQ A A+G + QTYRH++LP A R+IVP LTSE + ++KN++VA TI Sbjct: 126 VRSGINSLPRGQRNAGLAMGFTLAQTYRHVMLPMAFRIIVPPLTSEFLNIFKNSAVASTI 185 Query: 183 GLMELTAQARQISDATFQTFTAFGAATLIYLALALIAYQTMMLIDKAVRIPGTAPGR 239 GL+EL AQ RQ+ D T Q + +F A TL+Y+ + L M ++ R+PG G+ Sbjct: 186 GLLELAAQGRQLVDYTAQPYESFIAVTLMYMLINLTVMGIMRWVEARTRLPGFIGGK 242 >ZgltJ [E] COG0765 ABC-type amino acid transport system, permease component EcZ Escherichia coli O157:H7 EDL933 Length = 246 Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 106/239 (44%), Positives = 155/239 (64%), Gaps = 2/239 (0%) Query: 3 GVLLERTMDGQR-YIDWFLSGLGWTLALAFFGWWIAFAIGIVVGVGRTVHNPFFRALARL 61 G+ L++ G Y+ W SG T+AL+ W IAF +G G+ RTV N F L L Sbjct: 8 GIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTL 67 Query: 62 YVEIFRNIPVLVQMFLWYFVLPELLPTTMGDWIK-QIPPPWGSFFPALWCLGLYTAARIA 120 YVE+FRN+P++VQ F WY V+PELLP +G W K ++ P F ++ CLGL+TAAR+ Sbjct: 68 YVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVC 127 Query: 121 EQVRAGIEALPNGQHEAAAALGLSGYQTYRHIILPQALRLIVPSLTSEVMGVYKNTSVAL 180 EQVRA I++LP GQ AA A+GL+ Q YR+++LP A R+IVP +TSE+M + KN+++A Sbjct: 128 EQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIAS 187 Query: 181 TIGLMELTAQARQISDATFQTFTAFGAATLIYLALALIAYQTMMLIDKAVRIPGTAPGR 239 TIGL+++ AQA ++ D + + +F A TL Y+ + M L+++ VR+PG G+ Sbjct: 188 TIGLVDMAAQASKLLDYSAHAWESFTAITLAYVFINAFIMLVMTLVERKVRLPGNMGGK 246 >ECs0693 [E] COG0765 ABC-type amino acid transport system, permease component Ecs Escherichia coli O157:H7 Length = 246 Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 106/239 (44%), Positives = 155/239 (64%), Gaps = 2/239 (0%) Query: 3 GVLLERTMDGQR-YIDWFLSGLGWTLALAFFGWWIAFAIGIVVGVGRTVHNPFFRALARL 61 G+ L++ G Y+ W SG T+AL+ W IAF +G G+ RTV N F L L Sbjct: 8 GIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTL 67 Query: 62 YVEIFRNIPVLVQMFLWYFVLPELLPTTMGDWIK-QIPPPWGSFFPALWCLGLYTAARIA 120 YVE+FRN+P++VQ F WY V+PELLP +G W K ++ P F ++ CLGL+TAAR+ Sbjct: 68 YVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVC 127 Query: 121 EQVRAGIEALPNGQHEAAAALGLSGYQTYRHIILPQALRLIVPSLTSEVMGVYKNTSVAL 180 EQVRA I++LP GQ AA A+GL+ Q YR+++LP A R+IVP +TSE+M + KN+++A Sbjct: 128 EQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIAS 187 Query: 181 TIGLMELTAQARQISDATFQTFTAFGAATLIYLALALIAYQTMMLIDKAVRIPGTAPGR 239 TIGL+++ AQA ++ D + + +F A TL Y+ + M L+++ VR+PG G+ Sbjct: 188 TIGLVDMAAQASKLLDYSAHAWESFTAITLAYVFINAFIMLVMTLVERKVRLPGNMGGK 246 >gltJ [E] COG0765 ABC-type amino acid transport system, permease component Eco Escherichia coli K12 Length = 246 Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 106/239 (44%), Positives = 155/239 (64%), Gaps = 2/239 (0%) Query: 3 GVLLERTMDGQR-YIDWFLSGLGWTLALAFFGWWIAFAIGIVVGVGRTVHNPFFRALARL 61 G+ L++ G Y+ W SG T+AL+ W IAF +G G+ RTV N F L L Sbjct: 8 GIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAFLVGSFFGILRTVPNRFLSGLGTL 67 Query: 62 YVEIFRNIPVLVQMFLWYFVLPELLPTTMGDWIK-QIPPPWGSFFPALWCLGLYTAARIA 120 YVE+FRN+P++VQ F WY V+PELLP +G W K ++ P F ++ CLGL+TAAR+ Sbjct: 68 YVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKAELDPNIQFFLSSMLCLGLFTAARVC 127 Query: 121 EQVRAGIEALPNGQHEAAAALGLSGYQTYRHIILPQALRLIVPSLTSEVMGVYKNTSVAL 180 EQVRA I++LP GQ AA A+GL+ Q YR+++LP A R+IVP +TSE+M + KN+++A Sbjct: 128 EQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVLLPNAYRVIVPPMTSEMMNLVKNSAIAS 187 Query: 181 TIGLMELTAQARQISDATFQTFTAFGAATLIYLALALIAYQTMMLIDKAVRIPGTAPGR 239 TIGL+++ AQA ++ D + + +F A TL Y+ + M L+++ VR+PG G+ Sbjct: 188 TIGLVDMAAQAGKLLDYSAHAWESFTAITLAYVLINAFIMLVMTLVERKVRLPGNMGGK 246