BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0151.0009.p         (84 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr2517 [EF] COG0458 Carbamoylphosphate synthase large subunit (...   108   4e-24
SMc01215 [EF] COG0458 Carbamoylphosphate synthase large subunit ...    99   2e-21
AGc3955 [EF] COG0458 Carbamoylphosphate synthase large subunit (...    94   6e-20
CC2900 Non COG                                                         93   1e-19
BMEI0522 [EF] COG0458 Carbamoylphosphate synthase large subunit ...    91   7e-19

>mlr2517 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in
            MJ) Mlo Mesorhizobium loti
          Length = 1167

 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 66/82 (80%)

Query: 1    VNKVLEGRPHIVDAITNGDVQLVFNTTEGPQALADSRSLRRAALLHKVPYYTTLSGAVAA 60
            +NKVLEGRPHI DAI N  VQ+VFNTT+G +A++DS+SLRRA L+ KVPYYTTLSGA A 
Sbjct: 1086 INKVLEGRPHIEDAIRNRQVQIVFNTTDGQKAVSDSKSLRRATLMQKVPYYTTLSGAAAV 1145

Query: 61   ARGIRAYRAGDLEVRTLQSYFS 82
            A  I A +AG LEVR LQ YF+
Sbjct: 1146 AEAIAALKAGSLEVRPLQEYFA 1167


>SMc01215 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in
            MJ) Sme Sinorhizobium meliloti
          Length = 1163

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/81 (67%), Positives = 68/81 (83%)

Query: 1    VNKVLEGRPHIVDAITNGDVQLVFNTTEGPQALADSRSLRRAALLHKVPYYTTLSGAVAA 60
            +NKVLEGRPH+ DAI N  VQLV NTT+G +A++DS+SLRRA L+ KVPYYTT++GA AA
Sbjct: 1081 INKVLEGRPHVEDAIRNRQVQLVINTTDGNKAISDSKSLRRATLMQKVPYYTTMAGAEAA 1140

Query: 61   ARGIRAYRAGDLEVRTLQSYF 81
            A  I+A +AG+LEVR LQSYF
Sbjct: 1141 ALAIKALKAGNLEVRPLQSYF 1161


>AGc3955 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in
            MJ) Atu Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 1186

 Score = 94.4 bits (233), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 53/82 (64%), Positives = 67/82 (81%)

Query: 1    VNKVLEGRPHIVDAITNGDVQLVFNTTEGPQALADSRSLRRAALLHKVPYYTTLSGAVAA 60
            +NKV EGRPHI DAI N  VQLV NTT+  +A++DS+SLRRA L+ KVPYYTT++GA AA
Sbjct: 1105 INKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTMAGAEAA 1164

Query: 61   ARGIRAYRAGDLEVRTLQSYFS 82
            A  I+A +AG+LEV+ LQSYF+
Sbjct: 1165 ALAIKALKAGNLEVKPLQSYFN 1186


>CC2900 Non COG
          Length = 1099

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/83 (66%), Positives = 63/83 (75%)

Query: 1    VNKVLEGRPHIVDAITNGDVQLVFNTTEGPQALADSRSLRRAALLHKVPYYTTLSGAVAA 60
            V KVLEGRPHIVD + NG VQLVFNTTEG QAL DS  +RR AL+ KVPYYTT +GA+AA
Sbjct: 1017 VKKVLEGRPHIVDVMKNGGVQLVFNTTEGKQALEDSFEIRRTALMMKVPYYTTSAGALAA 1076

Query: 61   ARGIRAYRAGDLEVRTLQSYFSE 83
            A+ I    A  L+VR LQSY +E
Sbjct: 1077 AQAIAGAPAEALDVRPLQSYAAE 1099


>BMEI0522 [EF] COG0458 Carbamoylphosphate synthase large subunit (split gene in
            MJ) Bme Brucella melitensis
          Length = 1162

 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 48/81 (59%), Positives = 63/81 (77%)

Query: 1    VNKVLEGRPHIVDAITNGDVQLVFNTTEGPQALADSRSLRRAALLHKVPYYTTLSGAVAA 60
            +NKV+EGRPH+ DAI N  + LVFNTT+   A++DS+S+RRA L+ K+PYYTT++GA +A
Sbjct: 1080 INKVIEGRPHVEDAIRNRQIHLVFNTTDSASAVSDSKSIRRATLMQKLPYYTTMAGAESA 1139

Query: 61   ARGIRAYRAGDLEVRTLQSYF 81
            A  I A +AG LEVR LQ YF
Sbjct: 1140 AEAIAALKAGSLEVRPLQDYF 1160