BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0146.0027.p (196 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc4253 [QR] COG0500 SAM-dependent methyltransferases Atu Agroba... 189 4e-48 CC1925 [QR] COG0500 SAM-dependent methyltransferases Ccr Cauloba... 157 2e-38 BMEI0852 [QR] COG0500 SAM-dependent methyltransferases Bme Bruce... 148 8e-36 VC0813 [QR] COG0500 SAM-dependent methyltransferases Vch Vibrio ... 94 1e-19 mlr0132 [QR] COG0500 SAM-dependent methyltransferases Mlo Mesorh... 69 6e-12 >AGc4253 [QR] COG0500 SAM-dependent methyltransferases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 198 Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 96/195 (49%), Positives = 123/195 (63%), Gaps = 2/195 (1%) Query: 2 DDATLQFYRRNAEAYAGWAKAPS-TRLIGFLKLLPPGGAILELGCGAGNHAAVMLAEGFV 60 DD T+ FY +A AY +AP L FL L G ILELGCG G + ML+ GF Sbjct: 5 DDETIAFYSGHATAYTSRGQAPDRPHLETFLARLRAGAKILELGCGGGQDSEYMLSAGFD 64 Query: 61 LRATDGSPEMAEVAARRIKHPVEAMLFDELEDREAYDGVWASACLLHVPRDELAGIIGRI 120 + TDG+P++A+ A R+ PV +LF+ +ED YD VWA+ACLLHVPR L GIIGRI Sbjct: 65 VHPTDGTPDIAKAAQARLGIPVRTLLFENIEDAALYDAVWANACLLHVPRLALPGIIGRI 124 Query: 121 HRALKPGGVFYASYKIGHGDGRDSIGRYYNYPAADWLAATYAASGAWTQVSSDTSEIKSF 180 H ALKPGGVFYAS+K G +GRD+ GRYYNYP+ WL TY AWT+V + + + Sbjct: 125 HTALKPGGVFYASFKAGEVEGRDTFGRYYNYPSKAWLEETY-GQFAWTEVEIEARQGSGY 183 Query: 181 DEAPATMLHIVVRRS 195 D+ P LH+ ++ Sbjct: 184 DKLPTDWLHVTATKA 198 >CC1925 [QR] COG0500 SAM-dependent methyltransferases Ccr Caulobacter vibrioides Length = 209 Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 92/195 (47%), Positives = 116/195 (59%), Gaps = 1/195 (0%) Query: 1 VDDATLQFYRRNAEAYAGWAK-APSTRLIGFLKLLPPGGAILELGCGAGNHAAVMLAEGF 59 D+ TL+FY A+AYA A+ APS L FL LPPGG ILELGCG G + M GF Sbjct: 13 CDEVTLRFYANQAQAYAATARDAPSRLLARFLSQLPPGGYILELGCGDGRDSEAMSVLGF 72 Query: 60 VLRATDGSPEMAEVAARRIKHPVEAMLFDELEDREAYDGVWASACLLHVPRDELAGIIGR 119 ++ TDG MA+ A R+K PV M FD+L+ + AYDGVWA+A LLHVP L ++ R Sbjct: 73 LIDPTDGVEAMAKQAEGRLKRPVRVMRFDQLDAQGAYDGVWANASLLHVPGSALPDVLSR 132 Query: 120 IHRALKPGGVFYASYKIGHGDGRDSIGRYYNYPAADWLAATYAASGAWTQVSSDTSEIKS 179 I RALKPGG+ A+YK G +GRDS+GRY+NYP + L Y S W +S E Sbjct: 133 IFRALKPGGLHMATYKAGEIEGRDSLGRYFNYPTTEALEVAYQTSAGWEILSIQDFEGGD 192 Query: 180 FDEAPATMLHIVVRR 194 + L + RR Sbjct: 193 YQGGRRPWLVVTARR 207 >BMEI0852 [QR] COG0500 SAM-dependent methyltransferases Bme Brucella melitensis Length = 196 Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 82/192 (42%), Positives = 111/192 (57%), Gaps = 1/192 (0%) Query: 3 DATLQFYRRNAEAYAGWAKAPSTRLIGFLKLLPPGGAILELGCGAGNHAAVMLAEGFVLR 62 D TL FY +NAE YA + +L FL+ + PGG ILELG G+G A M+ GF + Sbjct: 6 DQTLSFYAQNAETYAA-RSVVNPKLAEFLQHVAPGGFILELGSGSGLDAKFMIENGFKVD 64 Query: 63 ATDGSPEMAEVAARRIKHPVEAMLFDELEDREAYDGVWASACLLHVPRDELAGIIGRIHR 122 TDGS E+AE A+R + PV M F++L+ E YDG++ASA LLH R L I+ IHR Sbjct: 65 PTDGSYELAEEASRLLGQPVRHMYFEDLDAIEQYDGIYASASLLHAKRSVLPEIVKCIHR 124 Query: 123 ALKPGGVFYASYKIGHGDGRDSIGRYYNYPAADWLAATYAASGAWTQVSSDTSEIKSFDE 182 ALK G +AS+K G +G D +GRYYNY A+ LA+ + W +S + + +D Sbjct: 125 ALKTSGTVWASFKDGSSEGYDQLGRYYNYMQAEELASLWRNCAPWGDLSFSSWQGSGYDG 184 Query: 183 APATMLHIVVRR 194 P + RR Sbjct: 185 LPTLWHGVTARR 196 >VC0813 [QR] COG0500 SAM-dependent methyltransferases Vch Vibrio cholerae Length = 192 Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 2/148 (1%) Query: 5 TLQFYRRNAEAY-AGWAKAPSTRLIG-FLKLLPPGGAILELGCGAGNHAAVMLAEGFVLR 62 +++FY +NA+ + + + ST L+ F+ LP GG +L+ GCG+G + L G+ + Sbjct: 2 SVEFYNQNAQQFFSSTVEVDSTSLLDQFVPYLPQGGLVLDAGCGSGRDSKRFLDMGYQID 61 Query: 63 ATDGSPEMAEVAARRIKHPVEAMLFDELEDREAYDGVWASACLLHVPRDELAGIIGRIHR 122 A D S +A +A + V F+ + YDG+WA A LLHV R+ L + + Sbjct: 62 AFDASAPLAALAEELLNQSVTVTTFENFTSSKRYDGIWACASLLHVTRESLPETFAHLAK 121 Query: 123 ALKPGGVFYASYKIGHGDGRDSIGRYYN 150 LK GG FY S+K G + R+ N Sbjct: 122 MLKCGGAFYCSFKYGQDEVERDGRRFTN 149 >mlr0132 [QR] COG0500 SAM-dependent methyltransferases Mlo Mesorhizobium loti Length = 201 Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 51/148 (34%), Positives = 69/148 (46%), Gaps = 13/148 (8%) Query: 5 TLQFYRRNAEAYAGWAK--------APSTRLIGFLKLLP----PGGAILELGCGAGNHAA 52 TL R+ AY +A P+ R LK L G ILE+G GAG A Sbjct: 6 TLAKSRQTISAYEDYADRYDAIVRHVPNEREQASLKRLVAIAGTSGRILEVGSGAGYDAD 65 Query: 53 VMLAEGFVLRATDGSPEMAEVAARRIKHPVEAMLFDELEDREAYDGVWASACLLHVPRDE 112 + G +R TD + E+ A R KH L + YD V A A L+HVPRD+ Sbjct: 66 FLEGLGVKVRRTDATKRFLELQAARGKHGDLLDLLTDDL-GGPYDAVLALAVLIHVPRDQ 124 Query: 113 LAGIIGRIHRALKPGGVFYASYKIGHGD 140 ++ +I R+L+PGG F S + G G+ Sbjct: 125 TDQVLAKIARSLRPGGAFLVSMRNGDGE 152