BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0146.0011.p (437 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMa1833 [G] COG2133 Glucose/sorbosone dehydrogenases Sme Sinorhi... 629 e-180 CC0777 [G] COG2133 Glucose/sorbosone dehydrogenases Ccr Caulobac... 399 e-111 SMc04291 [G] COG2133 Glucose/sorbosone dehydrogenases Sme Sinorh... 397 e-110 PA2414 [G] COG2133 Glucose/sorbosone dehydrogenases Pae Pseudomo... 379 e-105 SMb21364 [G] COG2133 Glucose/sorbosone dehydrogenases Sme Sinorh... 340 4e-93 >SMa1833 [G] COG2133 Glucose/sorbosone dehydrogenases Sme Sinorhizobium meliloti Length = 461 Score = 629 bits (1623), Expect = e-180, Method: Compositional matrix adjust. Identities = 319/436 (73%), Positives = 348/436 (79%), Gaps = 7/436 (1%) Query: 1 MSTSGVFARVVAAIGAGALAWRRMQGAQPAPAWGSAPEIPQAKPQGAIPTLKMPTARGWD 60 M S +F RVVA IGA A+ RR PA+GS P+IP+AKPQG IPTLKMPTA+GW Sbjct: 26 MGLSDIFGRVVALIGAAAILLRRQDSDSLEPAYGSTPKIPKAKPQG-IPTLKMPTAKGWA 84 Query: 61 KDQKPVAAPGLKVNAFAAGLDHPRWINVLPNGDVLIAEATQIAGTPRSVFHYAM-QTPRR 119 +Q P AA GLKVNAFAAGL HPRWI+VLPNGDVL+AEA G +S F YAM T +R Sbjct: 85 AEQMPTAAAGLKVNAFAAGLKHPRWIHVLPNGDVLVAEALSEPGGIKSAFDYAMFSTMKR 144 Query: 120 LFFFFFFFFFFFFNRITLLRDRDGDGVAESSSAFMEGLSQPFGMALVGDTFYVGNTDGVV 179 NRITLLRD DGDGVAE F++GL QPFGMAL+GDT YV NTDGVV Sbjct: 145 AAAVGASP-----NRITLLRDADGDGVAEVRPVFLDGLRQPFGMALLGDTLYVCNTDGVV 199 Query: 180 AFPYVAGADRITAQGRKLVSFKPDGHWTRSLLPSADGKKLYAGVGSLSNIAESGFAVEEG 239 AFPY G RI+ GRKL K GHWTRSLL S DG+KL+ GVGSLSNI E G AVEEG Sbjct: 200 AFPYRTGDTRISTTGRKLADLKAGGHWTRSLLASRDGQKLFIGVGSLSNIGERGMAVEEG 259 Query: 240 RAAIYELDLAGGTSRIFAGGLRNPVGIAWEPTTNVLWTVVNERDGLGDETPPDYLTSVRD 299 RAAI+EL L G RIFA GLRNPVG+AWEPTT LWTVVNERDGLGDETPPDYLTSVRD Sbjct: 260 RAAIHELGLKSGEHRIFASGLRNPVGMAWEPTTGALWTVVNERDGLGDETPPDYLTSVRD 319 Query: 300 GGFYGWPYCYWGKTVDDRVPQDPAMVAKAIQPDYALGGHTASLGLCWMPQGTLPGFPDGM 359 GGFYGWPYCYWG+ VDDRVPQDPAMVA AI PDYALGGHTASLGLCW+P G LPGF +GM Sbjct: 320 GGFYGWPYCYWGQIVDDRVPQDPAMVATAITPDYALGGHTASLGLCWLPAGILPGFSEGM 379 Query: 360 VIGQHGSWNRSTLSGYKVVFVPFASGRPAGPARDILSGFLAPDEKVSYGRPVGVALGPDG 419 VIGQHGSWNRSTLSGYKVVFVPF +GRPAGPARDIL+GFL+PDE+ SYGRPVGVA+GP+G Sbjct: 380 VIGQHGSWNRSTLSGYKVVFVPFVNGRPAGPARDILTGFLSPDERASYGRPVGVAIGPNG 439 Query: 420 SLLVADDVGNVIWRVT 435 SLLVADDVG+VIWRVT Sbjct: 440 SLLVADDVGDVIWRVT 455 >CC0777 [G] COG2133 Glucose/sorbosone dehydrogenases Ccr Caulobacter vibrioides Length = 442 Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust. Identities = 214/419 (51%), Positives = 274/419 (65%), Gaps = 27/419 (6%) Query: 33 WGSAPEIPQAKPQGAIPTLKMPTARGWDKDQKPVAAPGLKVNAFAAGLDHPRWINVLPNG 92 +G P +P+ + +PT+K+ GW D KP A G V FA GLDHPRW+ VLPNG Sbjct: 34 YGPNPTLPEPS-RTLLPTVKISEVVGWSNDAKPRAPAGFVVQPFATGLDHPRWLLVLPNG 92 Query: 93 DVLIAEATQIAGTPRSVFHYAMQTPRRLFFFFFFFFFF-------FFNRITLLRDRDGDG 145 DVL+AE+ + A + P+ L F +RI+LLRD+DGDG Sbjct: 93 DVLVAESNKPARKDK---------PKGLRAFAESMLMKKAGAGAPSADRISLLRDQDGDG 143 Query: 146 VAESSSAFMEGLSQPFGMALVGDTFYVGNTDGVVAFPYVAGADRITAQGRKLVSFKPDG- 204 +A+ + F+ L PFGMALVG T YV N D +VAFPY GA I A RK+ P G Sbjct: 144 IADLKTPFLVNLHSPFGMALVGSTLYVANADAIVAFPYTEGATTIAAGPRKVADL-PGGP 202 Query: 205 ---HWTRSLLPSADGKKLYAGVGSLSNIAESGFAVEEGRAAIYELDLAGGTSRIFAGGLR 261 HWT++++ S DG KLYA VGS SN+ E+G E RAAI E+DLA G R+FA GLR Sbjct: 203 LNHHWTKNIIASPDGTKLYAAVGSNSNVGENGMENEVDRAAILEVDLATGKKRVFASGLR 262 Query: 262 NPVGIAWEPTTNVLWTVVNERDGLGDETPPDYLTSVRDGGFYGWPYCYWGKTVDDRVP-- 319 NPVG++W P LWT VNERD LG++ PDY+TSVRDGGFYGWPY Y+G+T+D R+ Sbjct: 263 NPVGLSWNPANGQLWTAVNERDELGNDLVPDYMTSVRDGGFYGWPYSYFGQTLDTRIKDK 322 Query: 320 -QDPAMVAKAIQPDYALGGHTASLGLCWMPQGTLPG-FPDGMVIGQHGSWNRSTLSGYKV 377 + P +VA+AI PDYALG HTASLGL + + P + DG+ +GQHGSWNR+ +GYKV Sbjct: 323 DRRPDLVARAIVPDYALGSHTASLGLSFYTGTSFPARYKDGVFVGQHGSWNRNPQAGYKV 382 Query: 378 VFVPFASGRPAGPARDILSGFLAPDEKVSYGRPVGVALGPDGSLLVADDVGNVIWRVTA 436 VF+PF+ G+PAG D L+GFL + K + GRPVGV + DG+LLVADDVG+V+WRV+A Sbjct: 383 VFIPFSGGKPAGGVEDFLTGFLNAEGK-AQGRPVGVTVDNDGALLVADDVGDVVWRVSA 440 >SMc04291 [G] COG2133 Glucose/sorbosone dehydrogenases Sme Sinorhizobium meliloti Length = 442 Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust. Identities = 209/396 (52%), Positives = 264/396 (66%), Gaps = 15/396 (3%) Query: 48 IPTLKMPTARGWDKDQKPVAAPGLKVNAFAAGLDHPRWINVLPNGDVLIAEATQIAGTPR 107 IPT+ + A+GW + P A GLKVNAFAAGLDHPRW++VLPNGDVL+AE A Sbjct: 52 IPTVNIADAKGWQEGATPTPAKGLKVNAFAAGLDHPRWLHVLPNGDVLVAETNAPAK--- 108 Query: 108 SVFHYAMQTPRRLFFFFFF----FFFFFFNRITLLRDRDGDGVAESSSAFMEGLSQPFGM 163 H + ++ F NRITLLRD DGDG+A+ F EGL+ PFGM Sbjct: 109 ---HDEGFSLKKAFMKLAMKRAGAAATSANRITLLRDTDGDGIADLRRTFAEGLNAPFGM 165 Query: 164 ALVGDTFYVGNTDGVVAFPYVAGADRITAQGR--KLVSFKPDGHWTRSLLPSADGKKLYA 221 L YV NTD +VAFPY G R+ + L + + HWT+ ++ S DG+KLY Sbjct: 166 TLSEGKLYVANTDALVAFPYSRGQTRLGTPEKIIDLPAGNLNHHWTKDVIASPDGRKLYV 225 Query: 222 GVGSLSNIAESGFAVEEGRAAIYELDLAGGTSRIFAGGLRNPVGIAWEPTTNVLWTVVNE 281 VGS SN+ E+G A E+ RAA+ E+D A +R+FA GLRNP G++W P + LW VNE Sbjct: 226 TVGSNSNVGENGMAAEKYRAAVLEVDKASRRTRVFASGLRNPNGLSWNPESGELWVAVNE 285 Query: 282 RDGLGDETPPDYLTSVRDGGFYGWPYCYWGKTVDDRV-PQDPAMVAKAIQPDYALGGHTA 340 RD LGD+ PDY+TSVRDG FYGWPY Y+G+ VD R+ P P +VAKA++PDYALG HTA Sbjct: 286 RDELGDDLVPDYMTSVRDGAFYGWPYSYFGQNVDARIKPPRPDLVAKAVKPDYALGSHTA 345 Query: 341 SLGLCWMPQGTL-PGFPDGMVIGQHGSWNRSTLSGYKVVFVPFASGRPAGPARDILSGFL 399 SLGL + +L + +G +GQHGSWNRS SGYKV+FVPFA+G+P G RD+L+GF+ Sbjct: 346 SLGLTFSEGASLGRAYANGAFVGQHGSWNRSVHSGYKVIFVPFANGKPNGRPRDVLAGFV 405 Query: 400 APDEKVSYGRPVGVALGPDGSLLVADDVGNVIWRVT 435 D K + GRPVGVA+ G+LLVADDVGNVIWRV+ Sbjct: 406 GRDGK-AMGRPVGVAIDRRGALLVADDVGNVIWRVS 440 >PA2414 [G] COG2133 Glucose/sorbosone dehydrogenases Pae Pseudomonas aeruginosa Length = 439 Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust. Identities = 209/424 (49%), Positives = 270/424 (63%), Gaps = 21/424 (4%) Query: 25 QGAQ--PAPAWGSAPEIPQAKPQGAIPTLKMPTARGWDKDQKPVAAPGLKVNAFAAGLDH 82 QG+Q P G+ P +P+ K +P +K+P GW + KP A GLK+ A GL H Sbjct: 23 QGSQNDPQQQTGANPALPEPK-HFLLPPMKVPEGVGWSGEAKPTVAQGLKIEKIADGLQH 81 Query: 83 PRWINVLPNGDVLIAEATQIAGTPRSVFHYAMQTPRRLFFFFF----FFFFFFFNRITLL 138 PR + VLPNGDVL+ EA P + TP++L NRITLL Sbjct: 82 PRQLLVLPNGDVLVVEANSPGTAP-------VTTPKQLIAGMVKGKSGKAGKGGNRITLL 134 Query: 139 RDRDGDGVAESSSAFMEGLSQPFGMALVGDTFYVGNTDGVVAFPYVAGADRITAQGRKLV 198 R R G G F+EGL PFG+ VGD YV NT ++ + YV G R+ G + Sbjct: 135 R-RAGAGGQWQKYVFLEGLDSPFGVQRVGDYLYVANTGNIMRYRYVPGETRVADPGMEFT 193 Query: 199 SFKPD---GHWTRSLLPSADGKKLYAGVGSLSNIAESGFAVEEGRAAIYELDLAGGTSRI 255 PD HWT++LL S DG+KLY GVGS SNI E+G A+E RAAI E+D+A SRI Sbjct: 194 DL-PDTINHHWTKALLASPDGRKLYVGVGSNSNITENGAAIEYRRAAILEVDVASRGSRI 252 Query: 256 FAGGLRNPVGIAWEPTTNVLWTVVNERDGLGDETPPDYLTSVRDGGFYGWPYCYWGKTVD 315 +A GLRNP G+ WEP + LWT+VNERD +G++ PDYLTSVR+GGFYGWPY Y+G+ +D Sbjct: 253 YASGLRNPTGLQWEPVSGKLWTIVNERDEIGNDLVPDYLTSVREGGFYGWPYSYFGQHLD 312 Query: 316 DRV-PQDPAMVAKAIQPDYALGGHTASLGLCWMPQGTLPG-FPDGMVIGQHGSWNRSTLS 373 RV PQ P +VAKAI PDYALG H A+LGL + LP + +G + +HGSWNRS +S Sbjct: 313 SRVKPQRPDLVAKAIVPDYALGSHVAALGLFFYTGNELPERYRNGAFVSEHGSWNRSPVS 372 Query: 374 GYKVVFVPFASGRPAGPARDILSGFLAPDEKVSYGRPVGVALGPDGSLLVADDVGNVIWR 433 G++VV VPFA G+PAG + +++GF++ DEK +G PVG+A DG+LL+ADDVGN IWR Sbjct: 373 GFQVVHVPFADGKPAGAPQPVVTGFVSADEKQLFGAPVGLAQAADGALLIADDVGNAIWR 432 Query: 434 VTAA 437 V+AA Sbjct: 433 VSAA 436 >SMb21364 [G] COG2133 Glucose/sorbosone dehydrogenases Sme Sinorhizobium meliloti Length = 517 Score = 340 bits (872), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 190/418 (45%), Positives = 253/418 (60%), Gaps = 25/418 (5%) Query: 34 GSAPEIPQAKPQGAIPTLKMPTARGWDKDQKPVAAPGLKVNAFAAGLDHPRWINVLPNGD 93 G P +P+ + +P +K+ GW + P L + A+A L +PR ++ LPNGD Sbjct: 39 GPDPVLPEPTSE-LLPDMKVAEVVGWQDGKTPSVPDNLVIAAYAKDLANPRTVHTLPNGD 97 Query: 94 VLIAEATQIAGTPRSVFHYAMQTPRRLFFFFFFFFFF--------FFNRITLLRDRDGDG 145 VL+ ++ + +G P ++ P+ + + N ITLLRD D DG Sbjct: 98 VLVVQSREPSGKP-------IERPKDMIRGWVMSMAHGGGAGPEKESNLITLLRDTDRDG 150 Query: 146 VAESSSAFMEGLSQPFGMALVGDTFYVGNTDGVVAFPYVAGADRITAQGRKLVSFKPDG- 204 + + GL PFG+A T YV D ++A+PY G IT + R L P G Sbjct: 151 TVDERHDLLTGLHSPFGVAWHDGTLYVAAADAILAYPYQLGQAEITGEPRVLTPL-PGGP 209 Query: 205 ---HWTRSLLPSADGKKLYAGVGSLSNIAESGFAVEEGRAAIYELDLAGGTSRIFAGGLR 261 HWT+ L S DG+ LYA VGS SN+AE G E+GRAAI+++D G +R+FA GLR Sbjct: 210 INHHWTKDLALSPDGRYLYASVGSNSNVAERGLEAEKGRAAIWQVDRETGAARVFASGLR 269 Query: 262 NPVGIAWEPTTNVLWTVVNERDGLGDETPPDYLTSVRDGGFYGWPYCYWGKTVDDRV-PQ 320 NP G+ + P T VLWTVVNERD LG PDY+TSV++G FYGWP+ Y+G VD+RV P Sbjct: 270 NPNGLIFHPETGVLWTVVNERDELGPNLVPDYMTSVQEGAFYGWPWSYFGAHVDERVHPP 329 Query: 321 DPAMVAKAIQPDYALGGHTASLGLCWMPQGTLPG-FPDGMVIGQHGSWNRSTLSGYKVVF 379 P MV KAI PDYAL H A+LGL + LP F +G IG+HGSWNRS+ +GYKVV+ Sbjct: 330 RPDMVEKAIPPDYALSSHVAALGLVFSNGSALPEPFANGAFIGEHGSWNRSSFNGYKVVY 389 Query: 380 VPFASGRPAGPARDILSGFLAPDEKVSYGRPVGVALGPDGSLLVADDVGNVIWRVTAA 437 VPF +GRPAG A+DI++GF+ D+ + GRPVGVA+ G+LLVADD GN +WRV A Sbjct: 390 VPFENGRPAGKAQDIVTGFIEGDQ--ARGRPVGVAIDGTGALLVADDAGNTVWRVAGA 445