BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0144.0013.p         (155 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEI0201 [J] COG0261 Ribosomal protein L21 Bme Brucella melitensis    130   9e-31
mll4019_1 [J] COG0261 Ribosomal protein L21 Mlo Mesorhizobium loti    118   6e-27
AGc5054 [J] COG0261 Ribosomal protein L21 Atu Agrobacterium tume...   115   3e-26
SMc03770 [J] COG0261 Ribosomal protein L21 Sme Sinorhizobium mel...   105   4e-23
FN1117 [J] COG0261 Ribosomal protein L21 Fnu Fusobacterium nucle...    96   4e-20

>BMEI0201 [J] COG0261 Ribosomal protein L21 Bme Brucella melitensis
          Length = 181

 Score =  130 bits (328), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 63/103 (61%), Positives = 81/103 (78%), Gaps = 3/103 (2%)

Query: 1   MFAVIKTGGRQYRVVPNDVLEIGKIAGDVGTIVQLGEVLVLGGDTPVLGTPTVAGASVAA 60
           MFAVIKTGG+QYRV  ND++++ K+AG+ G IV+  EVL++G     +G PTVAGA V A
Sbjct: 40  MFAVIKTGGKQYRVAANDLIKVEKVAGEAGDIVEFAEVLMVG---STIGAPTVAGALVTA 96

Query: 61  EVLQHKRGAKVIAFKKRRRKNSRRKRGYRDELTVLRITEILAD 103
           EV++  RG KVIAFKKRRR+NS+R RG+R ELT +RI+EIL D
Sbjct: 97  EVVEQGRGRKVIAFKKRRRQNSKRTRGHRQELTTIRISEILTD 139


>mll4019_1 [J] COG0261 Ribosomal protein L21 Mlo Mesorhizobium loti
          Length = 110

 Score =  118 bits (295), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 62/108 (57%), Positives = 77/108 (71%), Gaps = 1/108 (0%)

Query: 1   MFAVIKTGGRQYRVVPNDVLEIGKIAGDVGTIVQLGEVLVLG-GDTPVLGTPTVAGASVA 59
           MFAVIKTGG+QYRV  ND+L+I K+  +VG IV++G VL  G G+    G P V GA V 
Sbjct: 1   MFAVIKTGGKQYRVAANDLLKIEKVEANVGDIVEIGHVLAHGEGENVTFGAPFVDGALVT 60

Query: 60  AEVLQHKRGAKVIAFKKRRRKNSRRKRGYRDELTVLRITEILADNAKP 107
           AEV++  +   VIAFKKRRR+NSRRK G+R  LT +RI+EIL   AKP
Sbjct: 61  AEVVEQGKNRTVIAFKKRRRQNSRRKIGHRQLLTTVRISEILLGGAKP 108


>AGc5054 [J] COG0261 Ribosomal protein L21 Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 104

 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/103 (58%), Positives = 74/103 (71%), Gaps = 1/103 (0%)

Query: 1   MFAVIKTGGRQYRVVPNDVLEIGKIAGDVGTIVQLGEVLVLG-GDTPVLGTPTVAGASVA 59
           MFAVIKTGG+QYRV  + VL I K+  + G  V+  EVLV+G G     G P V GA V 
Sbjct: 1   MFAVIKTGGKQYRVAADAVLTIEKLEAEAGATVEFTEVLVIGEGADAQFGAPFVKGAIVK 60

Query: 60  AEVLQHKRGAKVIAFKKRRRKNSRRKRGYRDELTVLRITEILA 102
           AEV++H RG KVIAFKKRRR+NS+R RG+R   TV+RIT+I+A
Sbjct: 61  AEVVEHNRGKKVIAFKKRRRQNSKRSRGHRQHHTVVRITDIVA 103


>SMc03770 [J] COG0261 Ribosomal protein L21 Sme Sinorhizobium meliloti
          Length = 123

 Score =  105 bits (262), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 71/101 (70%), Gaps = 1/101 (0%)

Query: 1   MFAVIKTGGRQYRVVPNDVLEIGKIAGDVGTIVQLGEVLVLG-GDTPVLGTPTVAGASVA 59
           MFAVIKTGG+QYRV  NDV+ I K+ G  G  ++  E+L++G G    +G P V GA V+
Sbjct: 1   MFAVIKTGGKQYRVAANDVITIEKLEGVAGDKIEFTEILMVGVGADATIGAPFVEGAVVS 60

Query: 60  AEVLQHKRGAKVIAFKKRRRKNSRRKRGYRDELTVLRITEI 100
           AEV+   R  KVIAFKKRRR+NS+R RG+R   T++RI +I
Sbjct: 61  AEVVDQGRAKKVIAFKKRRRQNSKRSRGHRQHQTIVRILDI 101


>FN1117 [J] COG0261 Ribosomal protein L21 Fnu Fusobacterium nucleatum
          Length = 104

 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 52/104 (50%), Positives = 71/104 (68%), Gaps = 2/104 (1%)

Query: 1   MFAVIKTGGRQYRVVPNDVLEIGKIAGDVGTIVQLGEVLVL-GGDTPV-LGTPTVAGASV 58
           M+AVIKTGG+QY+V   DVL++ K+  +V T V+L EVL++ GGD  V +G P V GA V
Sbjct: 1   MYAVIKTGGKQYKVTEGDVLKVEKLNAEVNTTVELTEVLLVAGGDNAVKVGKPLVEGAKV 60

Query: 59  AAEVLQHKRGAKVIAFKKRRRKNSRRKRGYRDELTVLRITEILA 102
             EVL   +G KVI FK + +K S RKRG+R   T +++T I+A
Sbjct: 61  VVEVLSQGKGPKVINFKYKPKKASHRKRGHRQLFTEVKVTSIIA 104