BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0143.0036.p (231 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc4373 [E] COG0410 ABC-type branched-chain amino acid transport... 327 2e-89 mll0756 Non COG 315 7e-86 SMb21707 [E] COG0410 ABC-type branched-chain amino acid transpor... 285 6e-77 PA4862 [E] COG0410 ABC-type branched-chain amino acid transport ... 251 1e-66 YPO1191 [E] COG0410 ABC-type branched-chain amino acid transport... 248 6e-66 >AGc4373 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 231 Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 156/231 (67%), Positives = 192/231 (83%) Query: 1 MLKIDNINLYYGAAQALRGVSLTAEPGKVTCVLGRNGVGKTSLLRAMVGQYPIASGTINF 60 ML ++NINL+YGAAQALRGVSL AE GK+TCVLGRNGVGK+SLLRA+ GQ P ++G+I+F Sbjct: 1 MLTVENINLHYGAAQALRGVSLKAEMGKITCVLGRNGVGKSSLLRAVTGQQPTSAGSISF 60 Query: 61 DGKDITALKPYERARRGIGFVPQGREIFPLLTVEENLKTGFGPLKREDRNIPDDVFSLFP 120 DG + L PY RA+RG+G+VPQGREIFPLL+V+ENL++G+ PL R++R IPDD+FSLFP Sbjct: 61 DGAPLDGLAPYHRAKRGVGYVPQGREIFPLLSVQENLESGYAPLPRKERFIPDDIFSLFP 120 Query: 121 VLETMLGRRGGDLSGGQQQQLAIGRALVMRPKLLLLDEPSEGIQPSIIKDIGRAISYLRN 180 VL++MLGRRGGDLSGGQQQQLAIGRALV RPK+L+LDEP+EGIQPSIIKDIGRAI YLR+ Sbjct: 121 VLQSMLGRRGGDLSGGQQQQLAIGRALVTRPKILVLDEPTEGIQPSIIKDIGRAIKYLRD 180 Query: 181 LGNIAIVLVEQYLDFACELGDSFAVMDRGAVKYACDRASLDPAEISRQMAL 231 +AI+LVEQYLDF EL D +MDRG + + +LD E R + + Sbjct: 181 STGMAILLVEQYLDFCRELADYVYIMDRGEIVHEGLAETLDTPEARRHLTV 231 >mll0756 Non COG Length = 231 Score = 315 bits (806), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 152/227 (66%), Positives = 182/227 (80%) Query: 1 MLKIDNINLYYGAAQALRGVSLTAEPGKVTCVLGRNGVGKTSLLRAMVGQYPIASGTINF 60 ML++ N L+YGAAQALRGVSL A GK+TCVLGRNGVGKTSL+R++VG + + SG++ F Sbjct: 1 MLEVSNATLHYGAAQALRGVSLKAGAGKITCVLGRNGVGKTSLMRSIVGHHRLTSGSVAF 60 Query: 61 DGKDITALKPYERARRGIGFVPQGREIFPLLTVEENLKTGFGPLKREDRNIPDDVFSLFP 120 +GK + Y+RAR GI FVPQGREIFPLLTV ENL++GF PLKR DRN+P VF LFP Sbjct: 61 EGKALDRSAAYDRARSGIAFVPQGREIFPLLTVRENLESGFAPLKRADRNVPAHVFELFP 120 Query: 121 VLETMLGRRGGDLSGGQQQQLAIGRALVMRPKLLLLDEPSEGIQPSIIKDIGRAISYLRN 180 VL+ MLGRRGGDLSGGQQQQLAIGRALVMRPKLL+LDEP+EGIQPSIIKDIGRAI +LR+ Sbjct: 121 VLKQMLGRRGGDLSGGQQQQLAIGRALVMRPKLLVLDEPTEGIQPSIIKDIGRAIRFLRD 180 Query: 181 LGNIAIVLVEQYLDFACELGDSFAVMDRGAVKYACDRASLDPAEISR 227 IA++LVEQYLDF EL D +MDRG + + LD A++ + Sbjct: 181 QAGIAVLLVEQYLDFCRELADEVNIMDRGQIVHTGPAEDLDRADVRK 227 >SMb21707 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 231 Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 139/231 (60%), Positives = 177/231 (76%) Query: 1 MLKIDNINLYYGAAQALRGVSLTAEPGKVTCVLGRNGVGKTSLLRAMVGQYPIASGTINF 60 ML ++N++L+YGAAQALR VS AE GK+TCVLGRNGVGK+SLLRA+ GQ+P+ SGTI+F Sbjct: 1 MLNVENVSLHYGAAQALRDVSFKAEMGKITCVLGRNGVGKSSLLRAVAGQHPVTSGTISF 60 Query: 61 DGKDITALKPYERARRGIGFVPQGREIFPLLTVEENLKTGFGPLKREDRNIPDDVFSLFP 120 +G + + P+ RA++G+G+VPQGREIFPLLTV+ENL+TGF PL+R R+IPDD+FSLFP Sbjct: 61 NGAPLDGMAPFRRAKQGVGYVPQGREIFPLLTVKENLETGFAPLRRAQRSIPDDIFSLFP 120 Query: 121 VLETMLGRRGGDLSGGQQQQLAIGRALVMRPKLLLLDEPSEGIQPSIIKDIGRAISYLRN 180 VL+TMLGRR I RALV RPK+L+LDEP+EGIQPSIIKDIGRAI YLR+ Sbjct: 121 VLQTMLGRRAATFRAASSSSSRIARALVTRPKILVLDEPTEGIQPSIIKDIGRAIKYLRD 180 Query: 181 LGNIAIVLVEQYLDFACELGDSFAVMDRGAVKYACDRASLDPAEISRQMAL 231 +AI+LVEQY+DF EL D +MDRGA + +LD + R + + Sbjct: 181 STGMAILLVEQYVDFCRELADHVYIMDRGAFVHEGPPETLDTPQARRHLTV 231 >PA4862 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Pae Pseudomonas aeruginosa Length = 232 Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 120/212 (56%), Positives = 158/212 (74%), Gaps = 1/212 (0%) Query: 1 MLKIDNINLYYGAAQALRGVSLTAEPGKVTCVLGRNGVGKTSLLRAMVGQYPIASGTINF 60 ML++D ++ YYG + LRG+S A+ G+VTC+LGRNGVGKT+LLR ++G P G + + Sbjct: 1 MLQVDKLHQYYGGSHILRGLSFEAKVGEVTCLLGRNGVGKTTLLRCLMGLVPAREGQVAW 60 Query: 61 DGKDITALKPYERARRGIGFVPQGREIFPLLTVEENLKTGFGPLK-REDRNIPDDVFSLF 119 +G+ +T L+P++R R GI +VPQGREIFP LTVEENL G R+ R +PD ++ LF Sbjct: 61 EGRSLTGLRPHQRVRAGIAYVPQGREIFPRLTVEENLLMGLSRFSARDARAVPDFIYELF 120 Query: 120 PVLETMLGRRGGDLSGGQQQQLAIGRALVMRPKLLLLDEPSEGIQPSIIKDIGRAISYLR 179 PVL M RRGGDLSGGQQQQLAIGRAL +P+LL+LDEP+EGIQPS+IK+IG + L Sbjct: 121 PVLREMKQRRGGDLSGGQQQQLAIGRALASQPRLLILDEPTEGIQPSVIKEIGAVVRSLA 180 Query: 180 NLGNIAIVLVEQYLDFACELGDSFAVMDRGAV 211 G++AI+LVEQ+ DFA EL D + VM RG + Sbjct: 181 ARGDMAILLVEQFYDFAAELADQYLVMARGEI 212 >YPO1191 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Ype Yersinia pestis Length = 232 Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 115/212 (54%), Positives = 161/212 (75%), Gaps = 1/212 (0%) Query: 1 MLKIDNINLYYGAAQALRGVSLTAEPGKVTCVLGRNGVGKTSLLRAMVGQYPIASGTINF 60 ML+++ ++ YYG + LRG++ A G+VTC+LGRNGVGKT+LL+ ++G PI +G+I + Sbjct: 1 MLQVNELDQYYGGSHILRGLTFEARVGEVTCLLGRNGVGKTTLLKCLIGLVPIKNGSITW 60 Query: 61 DGKDITALKPYERARRGIGFVPQGREIFPLLTVEENLKTGFGPLK-REDRNIPDDVFSLF 119 +GK+I+ P++R + GI +VPQGREIFP LTVEEN+ G + +++P+ ++ LF Sbjct: 61 EGKNISHQSPHQRVKEGIAYVPQGREIFPRLTVEENILLGLSRFPGSQSKSVPEHIYQLF 120 Query: 120 PVLETMLGRRGGDLSGGQQQQLAIGRALVMRPKLLLLDEPSEGIQPSIIKDIGRAISYLR 179 PVL+ M RRGGDLSGGQQQQLAIGRAL +P+LL+LDEP+EGIQPS+IK+IG I L Sbjct: 121 PVLQEMKHRRGGDLSGGQQQQLAIGRALACQPRLLILDEPTEGIQPSVIKEIGGVIKKLA 180 Query: 180 NLGNIAIVLVEQYLDFACELGDSFAVMDRGAV 211 G++AI+LVEQ+ DFA EL D++ VM RG + Sbjct: 181 AQGDMAILLVEQFYDFAAELADNYLVMSRGKI 212