BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0143.0005.p (634 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc316 [E] COG4166 ABC-type oligopeptide transport system, perip... 597 e-170 SMc02832 [E] COG4166 ABC-type oligopeptide transport system, per... 578 e-164 BMEI1934 [E] COG4166 ABC-type oligopeptide transport system, per... 548 e-155 mll5494 [E] COG4166 ABC-type oligopeptide transport system, peri... 526 e-149 PA1810 [E] COG4166 ABC-type oligopeptide transport system, perip... 467 e-131 >AGc316 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 614 Score = 597 bits (1539), Expect = e-170, Method: Compositional matrix adjust. Identities = 292/582 (50%), Positives = 395/582 (67%), Gaps = 9/582 (1%) Query: 44 WRHGLSTYGEIKYPADFKRYDYVKPDAPKGGVVRLFQPGTYDSFNLVVAGLKGSVSAAVA 103 WR G+ST GE+K+P F +DYV APKGG +RL GT+D+ N ++A KG + ++ Sbjct: 33 WRKGISTVGELKHPDGFDHFDYVNTKAPKGGTLRLSTSGTFDTLNPLLA--KGERATGLS 90 Query: 104 RIYDSLMEASLDEPDTYYGELAEAAAFPDDFSYVIYRLRPGSRWHDGKPVTPEDVIFSFE 163 +YD+LM+++ +E YG LAE ++PDD +RLR ++W DGKPVTPEDV+FSFE Sbjct: 91 LVYDTLMKSTEEELSASYGLLAEGVSYPDDIEKATFRLRQDAKWADGKPVTPEDVVFSFE 150 Query: 164 AWKANSPMFSAYYRHIVKAEKIGDRDVKFTFDSAGNRELPMITGQLTILPKHWWEGTDAQ 223 K SP + YY H+ KAE G+RD+ FTFD NRELP I GQL I+PKHWWEGT Sbjct: 151 KAKDLSPQLATYYTHVTKAEVSGERDITFTFDEKNNRELPQIVGQLLIVPKHWWEGTGPD 210 Query: 224 GKKRDITASTLEPPLGSGPYRIKEFVAGRSVVLERVKDYWGKDIPIAIGQNNFDELRYEY 283 GK RDI+ TLEP +GSGPY+I G SV ER DYWGKD+ + +G NNF + Y + Sbjct: 211 GKPRDISRGTLEPVMGSGPYKIAAVSPGSSVTYERRDDYWGKDVNVNVGMNNFKTIAYTF 270 Query: 284 FRDDTVAREALKADQFDWYGERSAKEWASAYDVPPVREKRLLKELF--TVRNQGRMQGWV 341 F D V +A K+ D+ E S+ W + YD P V+E R+ KE R+ G MQ +V Sbjct: 271 FADQDVEFQAFKSGTVDFRQEASSSRWVTGYDFPAVKEGRVKKEELPNIYRSVGIMQAFV 330 Query: 342 FNLRRPKFADPRLRRAFNYAFDFEEMNRVLSTGDYHRDSSYFDGIPDLMATGLPEGKELE 401 N+RR KF +P+LR+A NYAFDFEE+NR L+ G + R +S+F G +L ++GLP G+ELE Sbjct: 331 PNMRREKFQNPKLRKALNYAFDFEELNRTLAYGQFQRITSFFMG-SELASSGLPTGRELE 389 Query: 402 ILETVRDKVPPEVFTTPYKDPVGGTPENVRANLREATRLLKDAGFEIRDRKLVD-SSGQP 460 IL+ ++D+VPPEVFTT Y++PV G P R NLREA +L+K+AG+E+R ++V+ ++GQ Sbjct: 390 ILQELKDQVPPEVFTTEYRNPVAGDPAKQRDNLREAVKLMKEAGYELRGNRMVNAATGQQ 449 Query: 461 FTVEILGNSGDSGMERIALFYKPSLERLGITVNLRAVDTVQYQNRVREYDFEMVTQVWGQ 520 +E L +S SGMER L Y +L+++GI +R VD QY NR R +DF++ ++W Sbjct: 450 LDMEFLIDS--SGMERTILPYVQNLKKIGINATIRTVDASQYTNRTRSFDFDVTIKLWAT 507 Query: 521 SISPGNEQRDNFGSQAADRPGSNNLPGIKNPAVDAIIERIIFANSRADQVAAAKALDRVL 580 S +PGNEQ D +GS AADR GSNNL GIKNPAVDA++ ++IFA +R +QVAAA+ALDRVL Sbjct: 508 SANPGNEQADFWGSAAADRQGSNNLAGIKNPAVDALVRKVIFAPNRDEQVAAARALDRVL 567 Query: 581 LWNFYLVPHFNYDKQRYVYWDRFSHPDPLPKYAVSGFPNLWW 622 L N Y++P F + YW+ P+ LP+Y V GFP+ WW Sbjct: 568 LANSYVIPQFYRGEMFIAYWNTLIRPENLPEYGV-GFPDAWW 608 >SMc02832 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component Sme Sinorhizobium meliloti Length = 619 Score = 578 bits (1491), Expect = e-164, Method: Compositional matrix adjust. Identities = 289/591 (48%), Positives = 400/591 (67%), Gaps = 11/591 (1%) Query: 44 WRHGLSTYGEIKYPADFKRYDYVKPDAPKGGVVRLFQPGTYDSFNLVVAGLKGSVSAAVA 103 W H S+ GE KY F R+DYV PDAPKGG +RL + GT+DSFN ++A KG V+ V+ Sbjct: 36 WHHATSSIGEPKYKDGFARFDYVNPDAPKGGELRLSESGTFDSFNPILA--KGEVATGVS 93 Query: 104 R-IYDSLMEASLDEPDTYYGELAEAAAFPDDFSYVIYRLRPGSRWHDGKPVTPEDVIFSF 162 ++++L++++ DE T YG LAE ++PDD S +RLR ++W DGKPVTPEDV+FSF Sbjct: 94 SLVFETLLKSAEDEITTSYGLLAEGISYPDDISSATFRLRAEAKWADGKPVTPEDVVFSF 153 Query: 163 EAWKANSPMFSAYYRHIVKAEKIGDRDVKFTFDSAGNRELPMITGQLTILPKHWWEGTDA 222 + K ++P+FS YYRH++ AEK G+RDV F FD N ELP I GQ ILPKHWWEG DA Sbjct: 154 DMVKEHNPLFSNYYRHVISAEKTGERDVTFRFDEKNNHELPNILGQFPILPKHWWEGQDA 213 Query: 223 QGKKRDITASTLEPPLGSGPYRIKEFVAGRSVVLERVKDYWGKDIPIAIGQNNFDELRYE 282 +G KRDI+ +TLEP +GSGPY+I F AG S+ E DYWGKD+ + +G+ NF + Y Sbjct: 214 KGSKRDISRTTLEPVMGSGPYKIASFQAGGSIRFELRDDYWGKDLNVNVGRYNFRTINYA 273 Query: 283 YFRDDTVAREALKADQFDWYGERSAKEWASAYDVPPVREKRLLKELFT--VRNQGRMQGW 340 +F D +V EA +A D+Y + SA WA+AYD P +++ R+++E +R G MQ + Sbjct: 274 FFSDRSVQFEAFRAGNVDFYQDNSASHWATAYDFPAMKDGRVIREEIENPLRATGIMQAF 333 Query: 341 VFNLRRPKFADPRLRRAFNYAFDFEEMNRVLSTGDYHRDSSYFDGIPDLMATGLPEGKEL 400 V N+RR KF D R+R+A NYAFDFE++NR L+ + R SYF G +L ++GLPEG+E Sbjct: 334 VPNMRREKFKDQRVRQALNYAFDFEDLNRSLAHNAFQRVDSYFWGT-ELASSGLPEGREK 392 Query: 401 EILETVRDKVPPEVFTTPYKDPVGGTPENVRANLREATRLLKDAGFEIRDRKLVDS-SGQ 459 EILE ++DKVP VFTTPYK+PV G P+ VR NLR+A L K+AG+E++ +LV++ +G+ Sbjct: 393 EILEELKDKVPAAVFTTPYKNPVNGDPQKVRDNLRKALALFKEAGYELKGSRLVNAKTGE 452 Query: 460 PFTVEILGNSGDSGMERIALFYKPSLERLGITVNLRAVDTVQYQNRVREYDFEMVTQVWG 519 PF+ EIL + ER + S+ ++GI +R VD QY NRVR YD++M+ +W Sbjct: 453 PFSFEIL--LSNPTFERTVTPFVNSVRKIGIDARIRTVDDSQYTNRVRSYDYDMIYGIWA 510 Query: 520 QSISPGNEQRDNFGSQAADRPGSNNLPGIKNPAVDAIIERIIFANSRADQVAAAKALDRV 579 Q++ PGNEQ D +GS + ++PGS N GI +PA+D +I RI+FA +R + VA +ALDRV Sbjct: 511 QTLVPGNEQSDYWGSASVNQPGSRNYAGIADPAIDELIRRIVFAPNREELVATTRALDRV 570 Query: 580 LLWNFYLVPHFNYDKQRYVYWDRFSHPDPLPKYAVSGFPNLWWYDADKAAK 630 LL + Y+VP F R YW+ + P LP Y + FP+ WW + AAK Sbjct: 571 LLAHHYVVPLFYSKALRVAYWNHLARPKELPYYGMD-FPDAWW-SKNTAAK 619 >BMEI1934 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component Bme Brucella melitensis Length = 622 Score = 548 bits (1413), Expect = e-155, Method: Compositional matrix adjust. Identities = 284/609 (46%), Positives = 382/609 (62%), Gaps = 10/609 (1%) Query: 28 SAITPAFADDAPNGLKWRHGLSTYGEIKYPADFKRYDYVKPDAPKGGVVRLFQPGTYDSF 87 SA+ + AD+A +WR+ S E KYPADFK YDYV PDAPKGG + L GT+D+ Sbjct: 16 SAMPASRADNAEP--QWRYSSSLLDEPKYPADFKHYDYVNPDAPKGGTLNLVAVGTFDNL 73 Query: 88 N-LVVAGLK--GSVSAAVARIYDSLMEASLDEPDTYYGELAEAAAFPDDFSYVIYRLRPG 144 N VV G+ G +YD+LM S D+ T Y +A A +PDDFS+V ++L P Sbjct: 74 NPYVVQGVSAAGLSDFGGGMLYDTLMADSQDQGSTQYPLIASALQYPDDFSWVKFKLNPD 133 Query: 145 SRWHDGKPVTPEDVIFSFEAWKANSPMFSAYYRHIVKAEKIGDRDVKFTFDSAGNRELPM 204 ++WHDG+P+T +DVI+SF K SPM++ YY + AEK G+ +VKFTF GNRELP Sbjct: 134 AKWHDGQPITVDDVIWSFNVLKKQSPMYNQYYSDVESAEKTGEHEVKFTFSRKGNRELPQ 193 Query: 205 ITGQLTILPKHWWEGTDAQGKKRDITASTLEPPLGSGPYRIKEFVAGRSVVLERVKDYWG 264 I GQL ILPKHWW DA+GK+RDIT TLE PLGS Y+I+ G S++ RV+DYWG Sbjct: 194 IMGQLAILPKHWWTAKDARGKQRDITRPTLEIPLGSSAYKIESMKPGHSIIWARVEDYWG 253 Query: 265 KDIPIAIGQNNFDELRYEYFRDDTVAREAL-KADQFDWYGERSAKEWASAYDVPPVREKR 323 KD+P+ +G+NNFD + YEY+ ++ EA K Q+D+ E A+ WA Y+ P V+ Sbjct: 254 KDLPVNVGRNNFDHVAYEYYFNEDATWEAFKKGGQYDYRNENRAQRWAEQYNFPAVQRGD 313 Query: 324 LLKELFTVRNQGRMQGWVFNLRRPKFADPRLRRAFNYAFDFEEMNRVLSTGDYHRDSSYF 383 ++K F GRMQG+ N RR KF DP++R A YAFDFE MNR++ Y R +SYF Sbjct: 314 VVKASFPFHAVGRMQGYFLNTRRDKFKDPKVREALTYAFDFESMNRLMFYNQYKRINSYF 373 Query: 384 DGIPDLMATGLPEGKELEILETVRDKVPPEVFTTPYKDPVGGTPENVRANLREATRLLKD 443 G +L +G P E ILETV+D +P + T +K PV TP+ R NLR A +L Sbjct: 374 AG-NELALSGPPTPAEQAILETVKDALPADALTKEFKLPVYDTPQATRENLRTALKLFSQ 432 Query: 444 AGFEIRDRKLVDSSGQPFTVEILGNSGDSGMERIALFYKPSLERLGITVNLRAVDTVQYQ 503 AG+ ++ LVD+ G PFT+E LG D ERI + SL ++GI +R VD QYQ Sbjct: 433 AGWTLKGNTLVDAKGNPFTIEFLGQ--DPTDERIYNPFAASLRKIGINATVRIVDAAQYQ 490 Query: 504 NRVREYDFEMVTQVWGQSISPGNEQRDNFGSQAADRPGSNNLPGIKNPAVDAIIERIIFA 563 RV ++D++++T V Q+ SPGNEQRD +GS+AAD GS N GI+NPA+D +I+ +++A Sbjct: 491 ARVNDFDYDVITAVIAQTASPGNEQRDMWGSKAADFKGSRNYAGIRNPAIDKLIDLVVYA 550 Query: 564 NSRADQVAAAKALDRVLLWNFYLVPHFNYDKQRYVYWDRFSHPDPLPKYAVSGFPNLWWY 623 + AAA ALDR LLWN+Y++P + D YW++F P+ P Y + P WW Sbjct: 551 KDHEELEAAAHALDRALLWNYYVIPQWYSDHINVAYWNKFGMPEKQPDY-LGIDPYSWWI 609 Query: 624 DADKAAKLK 632 D K AKLK Sbjct: 610 DPAKEAKLK 618 >mll5494 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component Mlo Mesorhizobium loti Length = 625 Score = 526 bits (1356), Expect = e-149, Method: Compositional matrix adjust. Identities = 284/601 (47%), Positives = 379/601 (63%), Gaps = 15/601 (2%) Query: 39 PNGLKWRHGLSTYGEIKYPADFKRYDYVKPDAPKGGVVRLFQPGTYDSFNLVVAGLKGSV 98 P +WR S G+ KY +F+ YDYV P+APKGG + GTYDSFN + ++GS Sbjct: 24 PLADEWRTTSSLIGDSKYGDNFQHYDYVNPNAPKGGTLNSVLLGTYDSFNPYI--VQGSP 81 Query: 99 SAAVARI-----YDSLMEASLDEPDTYYGELAEAAAFPDDFSYVIYRLRPGSRWHDGKPV 153 +A + YD+LME + DE T + +A+A +PDD+S YRL ++WHDG+P+ Sbjct: 82 AAGLVGFGGGLLYDTLMEQATDEGSTSHPLIADAYKYPDDYSSATYRLDTRAKWHDGQPI 141 Query: 154 TPEDVIFSFEAWKANSPMFSAYYRHIVKAEKIGDRDVKFTFDSAGNRELPMITGQLTILP 213 T +DVI+SF+ KANSP +S Y+ ++ A + DR+V+F F+ GNRELP I G L +LP Sbjct: 142 TVDDVIWSFQVLKANSPQYSRYFENVTDAVAVSDREVEFHFNQKGNRELPKIIGDLAVLP 201 Query: 214 KHWWEGTDAQGKKRDITASTLEPPLGSGPYRIKEFVAGRSVVLERVKDYWGKDIPIAIGQ 273 KHWWEGTDA GKKRD+T TLE PLGS Y+I F G +V +RV +YW +P+ IG+ Sbjct: 202 KHWWEGTDASGKKRDVTKPTLEIPLGSAAYKIASFKPGSEIVWQRVPNYWAAKLPVKIGR 261 Query: 274 NNFDELRYEYFRDDTVAREAL-KADQFDWYGERSAKEWASAYDVPPVREKRLLKELFTVR 332 NFD RY Y DD A A K D E S+++WA+AY+ P ++ ++K+ F + Sbjct: 262 ENFDTRRYTYILDDNAAWLAFTKGGLEDINREYSSRKWATAYNFPAIQAGDVIKKDFQTQ 321 Query: 333 NQGRMQGWVFNLRRPKFADPRLRRAFNYAFDFEEMNRVLSTGDYHRDSSYFDGIPDLMAT 392 + MQG+V N RRP F D +R A FDFE MNR L G R SSYF G +L ++ Sbjct: 322 SPQAMQGFVLNQRRPLFQDRLVREALTIPFDFESMNRTLFFGFNTRTSSYFQGT-ELASS 380 Query: 393 GLPEGKELEILETVRDKVPPEVFTTPYKDPVGGTPENVRANLREATRLLKDAGFEIRDRK 452 GLP+GKELEILE RDK+PPE+FT +K PV +P+ R L++A L AG+ I+ K Sbjct: 381 GLPKGKELEILEKYRDKLPPELFTQEFKLPVYDSPQAERKYLKQAVDLFAKAGWVIKGGK 440 Query: 453 LVDS-SGQPFTVEILG-NSGDSGMERIALFYKPSLERLGITVNLRAVDTVQYQNRVREYD 510 +V++ +G PF EILG N D + IA Y +L ++G+ LR +D QY NRV +D Sbjct: 441 MVNAKTGAPFKFEILGWNDTD---QVIASPYIANLRKIGVDATLRIIDQTQYINRVNNFD 497 Query: 511 FEMVTQVWGQSISPGNEQRDNFGSQAADRPGSNNLPGIKNPAVDAIIERIIFANSRADQV 570 F++VT + QS SPGNEQRD + S+AAD PGS NL GIK+P VDA+++RIIFA R D V Sbjct: 498 FDVVTGILQQSDSPGNEQRDFWTSKAADAPGSRNLMGIKDPIVDALVDRIIFATDRDDLV 557 Query: 571 AAAKALDRVLLWNFYLVPHFNYDKQRYVYWDRFSHPDPLPKYAVSGFPNLWWYDADKAAK 630 AA ALDR+LLWNFY+VP ++ YWD+F PD P Y V + WW D DK Sbjct: 558 AATHALDRILLWNFYVVPQYHRSAVWLAYWDKFGFPDKQPAY-VGADIDSWWIDPDKEKA 616 Query: 631 L 631 L Sbjct: 617 L 617 >PA1810 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component Pae Pseudomonas aeruginosa Length = 615 Score = 467 bits (1202), Expect = e-131, Method: Compositional matrix adjust. Identities = 255/586 (43%), Positives = 355/586 (60%), Gaps = 16/586 (2%) Query: 45 RHGLSTYGEI-KYPADFKRYDYVKPDAPKGGVVRLFQPGTYDSFNLVVAGLKGSVSAAVA 103 +H L+ Y E KYPADFK +DYV PDAPKGG++R G +DS N + KG + ++ Sbjct: 26 KHALTLYDEPPKYPADFKHFDYVNPDAPKGGILRQADFGGFDSLNPFIG--KGVSAPSLG 83 Query: 104 RIYDSLMEASLDEPDTYYGELAEAAAFPDDFSYVIYRLRPGSRWHDGKPVTPEDVIFSFE 163 IYD+L S DEP T YG LAE D SYV + LRP +R+ DG PVT EDV+F+FE Sbjct: 84 LIYDTLAFQSQDEPFTEYGLLAEKIEKAPDNSYVRFYLRPQARFSDGTPVTAEDVVFTFE 143 Query: 164 AWKANS-PMFSAYYRHIVKAEKIGDRDVKFTFDSAGNRELPMITGQLTILPKHWWEGTDA 222 + PM+ YY + K V+F F AGNRELP+I GQ+ ILPKHWW Sbjct: 144 TLVSKGDPMYRNYYADVDKVVAEDKLRVRFDFKHAGNRELPLILGQIAILPKHWW----- 198 Query: 223 QGKKRDITASTLEPPLGSGPYRIKEFVAGRSVVLERVKDYWGKDIPIAIGQNNFDELRYE 282 RD + + +E P+GSGPYRI + GRS+ ERVKD+W KD+P++ G NFD + + Sbjct: 199 --ADRDFSKTGMEIPVGSGPYRIAKVDPGRSISYERVKDWWAKDLPVSRGLYNFDTITID 256 Query: 283 YFRDDTVAREALKADQFDWYGERSAKEWASAYDVPPVREKRLLKELFTVRNQGRMQGWVF 342 +RD +VA EA KA Q+D E SAK+WA+ Y+ P +R+ R +K N MQG+ F Sbjct: 257 SYRDMSVALEAFKAGQYDVNLEYSAKDWATGYESPALRDGRFIKASIHNHNPVGMQGFAF 316 Query: 343 NLRRPKFADPRLRRAFNYAFDFEEMNRVLSTGDYHRDSSYFDGIPDLMATGLPEGKELEI 402 N+RRP F D R+R+A + FDFE N+ L Y R +SYF+ ++ A LP EL+I Sbjct: 317 NIRRPVFQDRRVRQAISLLFDFEWSNKQLFFSSYKRTNSYFEN-SEMAAHQLPSEAELKI 375 Query: 403 LETVRDKVPPEVFTTPYKDPVGGTPENVRANLREATRLLKDAGFEIRDRKLVDSSGQPFT 462 LE +R K+P E F +++PV +R R+A +LL +AG+ I + ++V GQP + Sbjct: 376 LEPLRGKIPDEAFDQVFQNPVNDGSGVIREQRRKAYQLLTEAGYRIENNRMVGPDGQPLS 435 Query: 463 VEILGNSGDSGMERIALFYKPSLERLGITVNLRAVDTVQYQNRVREYDFEMVTQVWGQSI 522 E + + MER+ L +K +L LGI + +R VD Q+ NR+R DF+M + W QS Sbjct: 436 FEFM--LFQANMERVILPFKRNLAELGIDMQIRRVDVSQFVNRLRSRDFDMTSATWPQSN 493 Query: 523 SPGNEQRDNFGSQAADRPGSNNLPGIKNPAVDAIIERIIFANSRADQVAAAKALDRVLLW 582 SPGNEQR+ + S +AD+ GS N G+K+PA+D+++E +I ++SR + +ALDRVL W Sbjct: 494 SPGNEQREFWHSSSADKAGSRNFIGLKDPAIDSLVESLIQSDSRQSLIDHTRALDRVLSW 553 Query: 583 NFYLVPHFNYDKQRYVYWDRFSHPDPLPKYAVSGFPNLWWYDADKA 628 +Y+VP++ D R YW+RF P P Y WW +DKA Sbjct: 554 GYYVVPNYYVDTWRVAYWNRFGRPKVTPLYDWGLM--TWWQTSDKA 597