BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0143.0002.p (233 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr5497 [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetas... 303 3e-82 SMc02898 [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid syntheta... 298 7e-81 AGc152 [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase... 293 3e-79 BMEI1904 [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid syntheta... 292 4e-79 CC2934 [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase... 206 5e-53 >mlr5497 [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase Mlo Mesorhizobium loti Length = 242 Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 154/232 (66%), Positives = 179/232 (77%) Query: 1 MAATRLPGKPLLEIARVPMIVHVLRRAEAAGIGRVAVATDTAEIAAAVKAAGGEVVMTRS 60 MA+TRLPGKPL +I+ PMIVHV RRA AG+GRV VATDT +A AV+A G E VMTR Sbjct: 11 MASTRLPGKPLADISGAPMIVHVARRAAEAGLGRVVVATDTQSVAEAVRAHGFEAVMTRI 70 Query: 61 DHPSGSDRIYEAMTTLDPGGHAEIVVNLQGDFPTISPETIRSVMPALDDPAVDISTLASR 120 DH SGSDRI+EA+ LDPG E +VN+QGD PTI P I + + +D AVDI+TL Sbjct: 71 DHESGSDRIHEALAALDPGRKVETIVNVQGDLPTIDPGIIAASLRPFEDAAVDIATLGVE 130 Query: 121 IHSEEEDQAPSVVKAVGSPIGPNRLRALYFTRATAPYGDGPRYHHIGLYAYRRAALERFV 180 I EEE P+VVK VGSP+ RLRALYFTRATAP+G+GP YHH+GLYAYRR+ALERFV Sbjct: 131 IVREEEKTNPNVVKIVGSPLSATRLRALYFTRATAPWGEGPLYHHVGLYAYRRSALERFV 190 Query: 181 ALPPSPLEQQEKLEQLRALEAGMRIDITIVDTVPRGVDTPADLETARRILSK 232 AL PSPLE++E+LEQLRALEAGMRID IV ++P GVDTP DLE AR ILS Sbjct: 191 ALKPSPLERRERLEQLRALEAGMRIDAEIVRSLPLGVDTPQDLERARTILSN 242 >SMc02898 [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase Sme Sinorhizobium meliloti Length = 250 Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 149/231 (64%), Positives = 177/231 (76%) Query: 1 MAATRLPGKPLLEIARVPMIVHVLRRAEAAGIGRVAVATDTAEIAAAVKAAGGEVVMTRS 60 MA+TRLPGKPL +I +PMIV V RRA A +GR+ VA D ++ AAV AG E +MTR Sbjct: 17 MASTRLPGKPLADICGLPMIVQVARRAAEAEVGRIVVAVDHPDVFAAVTGAGFEAIMTRV 76 Query: 61 DHPSGSDRIYEAMTTLDPGGHAEIVVNLQGDFPTISPETIRSVMPALDDPAVDISTLASR 120 DH SGSDRI+EA+ DP G AEIV+N+QGD PTI P IR+ + L++PA DI+TL Sbjct: 77 DHQSGSDRIHEALLKADPHGEAEIVINVQGDLPTIEPGPIRAALKPLENPATDIATLTVA 136 Query: 121 IHSEEEDQAPSVVKAVGSPIGPNRLRALYFTRATAPYGDGPRYHHIGLYAYRRAALERFV 180 I E E P+VVK VGSP+ +R RALYFTRATAPYG+GP YHHIGLYAYRR ALE FV Sbjct: 137 ITDEHEKTNPNVVKVVGSPLSDSRFRALYFTRATAPYGEGPLYHHIGLYAYRRKALETFV 196 Query: 181 ALPPSPLEQQEKLEQLRALEAGMRIDITIVDTVPRGVDTPADLETARRILS 231 +L PS LE++E LEQLRALEAGMRID+ +VD+VP GVDTPADL+ ARRILS Sbjct: 197 SLKPSTLEKRESLEQLRALEAGMRIDVEVVDSVPLGVDTPADLDKARRILS 247 >AGc152 [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 251 Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 149/231 (64%), Positives = 174/231 (75%) Query: 1 MAATRLPGKPLLEIARVPMIVHVLRRAEAAGIGRVAVATDTAEIAAAVKAAGGEVVMTRS 60 MA+TRLPGKPL +I PMIV V RA AG R+ VA D ++ AAV+ AG +V+MTR Sbjct: 17 MASTRLPGKPLADIGGRPMIVQVALRAREAGAERIVVAVDDEQVFAAVQNAGFDVMMTRG 76 Query: 61 DHPSGSDRIYEAMTTLDPGGHAEIVVNLQGDFPTISPETIRSVMPALDDPAVDISTLASR 120 DH SGSDRI+EA+ DP G AE V+N+QGD PTI ETIR+ + +++ AVDI+TL Sbjct: 77 DHQSGSDRIFEALQKADPYGKAEYVINVQGDLPTIEAETIRASLRPMENAAVDIATLTVE 136 Query: 121 IHSEEEDQAPSVVKAVGSPIGPNRLRALYFTRATAPYGDGPRYHHIGLYAYRRAALERFV 180 I EEE P+VVK VGSP+ RLRALYFTR TAPYGDGP YHHIGLY YRRAALE FV Sbjct: 137 ITDEEEKTNPNVVKVVGSPLSETRLRALYFTRTTAPYGDGPLYHHIGLYTYRRAALETFV 196 Query: 181 ALPPSPLEQQEKLEQLRALEAGMRIDITIVDTVPRGVDTPADLETARRILS 231 LPPSPLE +E+LEQLRALEAGMRID IV +VP GVDTP DLE AR+IL+ Sbjct: 197 RLPPSPLELRERLEQLRALEAGMRIDAEIVRSVPLGVDTPHDLEKARKILA 247 >BMEI1904 [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase Bme Brucella melitensis Length = 295 Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 151/234 (64%), Positives = 174/234 (74%), Gaps = 1/234 (0%) Query: 1 MAATRLPGKPLLEIARVPMIVHVLRRAEAAGIGRVAVATDTAEIAAAVKAAGGEVVMTRS 60 + +TRLP KPL +I PMIVHV RA AA +GR +ATD+ EI V A G E +MTR Sbjct: 59 LGSTRLPNKPLADICGKPMIVHVADRAAAAKLGRTVIATDSEEIFKVVAAHGHEAIMTRG 118 Query: 61 DHPSGSDRIYEAMTTLDPGGHAEIVVNLQGDFPTISPETIRSVMPALDDPAVDISTLASR 120 DH SGSDRIYEA+ LDP G + VVN+QGD PTI P+TIR + L+D DI+TL Sbjct: 119 DHESGSDRIYEALAKLDPSGEIDAVVNVQGDLPTIDPDTIRRALLPLEDGPADIATLGVE 178 Query: 121 IHSEEEDQAPSVVKAVGSPIGPN-RLRALYFTRATAPYGDGPRYHHIGLYAYRRAALERF 179 I EEE P+VVK VGSP+ N RLRALYFTRATAPYG+GP YHHIGLYAYRR+ALERF Sbjct: 179 ITVEEEKTNPNVVKIVGSPLAGNRRLRALYFTRATAPYGEGPLYHHIGLYAYRRSALERF 238 Query: 180 VALPPSPLEQQEKLEQLRALEAGMRIDITIVDTVPRGVDTPADLETARRILSKA 233 V L PSPLE++EKLEQLRALEAGMRID+ IV TVP GVDT ADL+ AR S+A Sbjct: 239 VKLGPSPLEKREKLEQLRALEAGMRIDVEIVKTVPLGVDTQADLDRARTFCSQA 292 >CC2934 [M] COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase Ccr Caulobacter vibrioides Length = 245 Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 120/230 (52%), Positives = 145/230 (63%), Gaps = 3/230 (1%) Query: 1 MAATRLPGKPLLEIARVPMIVHVLRRAEAAGIGRVAVATDTAEIAAAVKAAGGEVVMTRS 60 MAATRLPGKPL +I VPMIV VLR+ AGIG VAVA EI AV+ AGG V+T Sbjct: 11 MAATRLPGKPLADIGGVPMIVRVLRQGLEAGIGPVAVAAGDPEIVEAVQKAGGTAVLTDP 70 Query: 61 DHPSGSDRIYEAMTTLDPGGHAEIVVNLQGDFPTISPETIRSVMPALDDPA-VDISTLAS 119 D PSGSDRI A+ LDPG ++V+NLQGD P + P + L + DI+T+ + Sbjct: 71 DLPSGSDRILAALAQLDPGFAHDVVINLQGDMPFVDPAVLSDCARILKEFGDADIATVVA 130 Query: 120 RIHSEEEDQAPSVVKAV-GSPIGPNRLRALYFTRATAPYGDGPRYHHIGLYAYRRAALER 178 S + P VVKAV RALYFTR+T YGDGP + HIG+Y YRR ALE Sbjct: 131 PEASPADRANPDVVKAVLAMEEDGQSGRALYFTRSTL-YGDGPVWRHIGIYGYRREALEA 189 Query: 179 FVALPPSPLEQQEKLEQLRALEAGMRIDITIVDTVPRGVDTPADLETARR 228 F A PSPLE++EKLEQLRA+E G+ I + T P VD P+DLE AR+ Sbjct: 190 FNAAAPSPLEKREKLEQLRAMELGLTIRAAVAKTAPISVDNPSDLEAARK 239