BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0143.0001.p (286 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc151 [E] COG0077 Prephenate dehydratase Atu Agrobacterium tume... 382 e-106 BMEI1905 [E] COG0077 Prephenate dehydratase Bme Brucella melitensis 366 e-101 SMc02899 [E] COG0077 Prephenate dehydratase Sme Sinorhizobium me... 362 e-100 mlr5498 [E] COG0077 Prephenate dehydratase Mlo Mesorhizobium loti 353 2e-97 CC2933 Non COG 333 3e-91 >AGc151 [E] COG0077 Prephenate dehydratase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 287 Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust. Identities = 177/281 (62%), Positives = 226/281 (80%), Gaps = 2/281 (0%) Query: 6 KIAFQGEPGANSHIAIVEAYPDAEPMPCPTFEDALAAISSGEADLGMIPIENSVAGRVAD 65 +IAFQGE GANS +A + +PD EP+PCPTFEDA AI +GEADLGMIPIEN++AGRVAD Sbjct: 7 RIAFQGEFGANSDMACRDMFPDMEPLPCPTFEDAFNAIENGEADLGMIPIENTLAGRVAD 66 Query: 66 IHHLLPASGLFIVGEWFLPIRHQLMAINGTKLADIKSVESHVHALGQCRRVIRKLGIKPI 125 IHHLLP S L I+GE+F+PIR QLM + G +I++V SH+HALGQCR++IR G KP+ Sbjct: 67 IHHLLPESRLHIIGEYFMPIRFQLMVVPGVTKDEIRTVHSHIHALGQCRKIIRSNGWKPV 126 Query: 126 VAADTAGSARDISERANKSVAAIASRLAADIYGLDILAEDIEDEAHNTTRFVVLAREAKW 185 +A DTAGSAR +SE+ ++S+AA+A RLAAD+YGLDILAE++ED +N TRFVVL+R+ W Sbjct: 127 IAGDTAGSARLVSEKGDRSMAALAPRLAADLYGLDILAENVEDSENNVTRFVVLSRDENW 186 Query: 186 AAQGSGP--LVTTFVFRVRNLPAALYKALGGFATNGVNMTKLESYMVDGNFFATQFYADV 243 A + S +VTTFVF VRN+PAALYKA+GGFATNG+NMTKLESY + G F ATQFYAD+ Sbjct: 187 AKRQSSDEIVVTTFVFNVRNIPAALYKAMGGFATNGINMTKLESYQLGGKFVATQFYADI 246 Query: 244 DGHPDDRGLAFAIEELKFFSREFRIVGVYPGHPFRATFSET 284 +GHPDD + A++EL+FFS + RI+GVY GH R +++ Sbjct: 247 EGHPDDEPVRHALDELRFFSEKVRILGVYNGHAMRGKLNQS 287 >BMEI1905 [E] COG0077 Prephenate dehydratase Bme Brucella melitensis Length = 290 Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust. Identities = 171/280 (61%), Positives = 220/280 (78%), Gaps = 2/280 (0%) Query: 3 KKLKIAFQGEPGANSHIAIVEAYPDAEPMPCPTFEDALAAISSGEADLGMIPIENSVAGR 62 K +I+FQGE GANS A +PD EP+PCPTFEDA A+ +G ADL MIPIEN++AGR Sbjct: 5 KTNRISFQGEAGANSDTACRNMFPDMEPLPCPTFEDAFNAVETGAADLAMIPIENTLAGR 64 Query: 63 VADIHHLLPASGLFIVGEWFLPIRHQLMAINGTKLADIKSVESHVHALGQCRRVIRKLGI 122 VADIH+LLP + + IVGE+FLPI QLM + G + +IK+V SH+HALGQCR VIR+ G Sbjct: 65 VADIHYLLPLADMHIVGEYFLPIHFQLMVLPGVRREEIKTVHSHIHALGQCRNVIRQNGW 124 Query: 123 KPIVAADTAGSARDISERANKSVAAIASRLAADIYGLDILAEDIEDEAHNTTRFVVLARE 182 K ++A DTAG+AR +++ ++S+AA+A RLAAD+YGLDIL E++ED +N TRFVVL++ Sbjct: 125 KGVIAGDTAGAARLVADVKDRSMAALAPRLAADLYGLDILEENVEDSENNVTRFVVLSKN 184 Query: 183 AKWAA--QGSGPLVTTFVFRVRNLPAALYKALGGFATNGVNMTKLESYMVDGNFFATQFY 240 +WAA + +VTTFVFRVRN+PAALYKALGGFATNGVNMTKLESY + G F ATQFY Sbjct: 185 KQWAARPENDERIVTTFVFRVRNVPAALYKALGGFATNGVNMTKLESYQLGGRFIATQFY 244 Query: 241 ADVDGHPDDRGLAFAIEELKFFSREFRIVGVYPGHPFRAT 280 AD++GHP++R + A+EEL+FF++E RI+GVY G R T Sbjct: 245 ADIEGHPEERSVQLALEELRFFTKEVRILGVYKGSDIRGT 284 >SMc02899 [E] COG0077 Prephenate dehydratase Sme Sinorhizobium meliloti Length = 284 Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust. Identities = 171/284 (60%), Positives = 219/284 (77%), Gaps = 3/284 (1%) Query: 1 MTKKL-KIAFQGEPGANSHIAIVEAYPDAEPMPCPTFEDALAAISSGEADLGMIPIENSV 59 MT K +I+FQG+ GANS +A + +P EP+PC TFEDA A+ +GEADL MIPIEN++ Sbjct: 1 MTAKTNRISFQGDYGANSDMACRDMFPSMEPLPCQTFEDAFLAVENGEADLAMIPIENTI 60 Query: 60 AGRVADIHHLLPASGLFIVGEWFLPIRHQLMAINGTKLADIKSVESHVHALGQCRRVIRK 119 AGRVADIHHLLP S L IVGE+F+PIR QLM + G +I++V SH+HALGQCR+++R Sbjct: 61 AGRVADIHHLLPESRLHIVGEYFMPIRFQLMVLPGVGREEIRTVHSHIHALGQCRKIVRA 120 Query: 120 LGIKPIVAADTAGSARDISERANKSVAAIASRLAADIYGLDILAEDIEDEAHNTTRFVVL 179 G KP+VA DTAG+A+ + E ++S+AA+A RLAAD+YGLDI+AE++ED N TRFVVL Sbjct: 121 NGWKPVVAGDTAGAAKLVKEVGDRSMAALAPRLAADLYGLDIIAENVEDTDSNVTRFVVL 180 Query: 180 AREAKWAAQGSGP--LVTTFVFRVRNLPAALYKALGGFATNGVNMTKLESYMVDGNFFAT 237 +RE A+ S ++TTFVF VRN+PAALYKA+GGFATNG+NMTKLESY + G F AT Sbjct: 181 SREESRVARTSKDELIITTFVFNVRNIPAALYKAMGGFATNGINMTKLESYQLGGKFVAT 240 Query: 238 QFYADVDGHPDDRGLAFAIEELKFFSREFRIVGVYPGHPFRATF 281 QFYAD++GHPDD G+ A++EL+FFS RI+G YP HP R Sbjct: 241 QFYADIEGHPDDIGVRHAMDELRFFSENVRILGTYPAHPMRGVL 284 >mlr5498 [E] COG0077 Prephenate dehydratase Mlo Mesorhizobium loti Length = 287 Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 169/281 (60%), Positives = 215/281 (76%), Gaps = 3/281 (1%) Query: 3 KKLKIAFQGEPGANSHIAIVEAYPDAEPMPCPTFEDALAAISSGEADLGMIPIENSVAGR 62 K +I+FQGEPGANS A YP EP+PCPTFEDA A+ +G+ADL MIPIEN++AGR Sbjct: 4 KTNRISFQGEPGANSDTACRNVYPSMEPLPCPTFEDAFNAVETGKADLAMIPIENTIAGR 63 Query: 63 VADIHHLLPASGLFIVGEWFLPIRHQLMAINGTKLADIKSVESHVHALGQCRRVIRKLGI 122 VADIHHLLP S + IVGE+FLPI QLM + G K +IK+V SH+HALGQCR+ IRK G Sbjct: 64 VADIHHLLPESRMHIVGEYFLPIHFQLMVLPGVKRDEIKTVHSHIHALGQCRKYIRKNGW 123 Query: 123 KPIVAADTAGSARDISERANKSVAAIASRLAADIYGLDILAEDIEDEAHNTTRFVVLARE 182 K +VA DTAG+A+ ISE ++++AA++ LAA +YGLDI+ E++ED N TRFVVL + Sbjct: 124 KAVVAGDTAGAAKMISEVKDRTMAALSPALAATLYGLDIIEENVEDTDSNVTRFVVLTKS 183 Query: 183 AKWAAQGSG--PLVTTFVFRVRNLPAALYKALGGFATNGVNMTKLESYMVDGNFFATQFY 240 +WA + S ++TTF+FRVRN+PAALYKA+GGFATNG+NMTKLESY + G F AT FY Sbjct: 184 KQWAERPSPDVKMMTTFIFRVRNVPAALYKAMGGFATNGINMTKLESYQL-GAFTATLFY 242 Query: 241 ADVDGHPDDRGLAFAIEELKFFSREFRIVGVYPGHPFRATF 281 AD++GHPDD + A++EL+FFSRE RI+GVYP R + Sbjct: 243 ADIEGHPDDPLVKLALDELRFFSREVRILGVYPASESREQW 283 >CC2933 Non COG Length = 283 Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 182/279 (65%), Positives = 211/279 (75%), Gaps = 1/279 (0%) Query: 1 MTKKLKIAFQGEPGANSHIAIVEAYPDAEPMPCPTFEDALAAISSGEADLGMIPIENSVA 60 M+ KIAFQGEPGANSH A +PD E PC TFE+A AI SG A LGMIPIENS+A Sbjct: 1 MSLLKKIAFQGEPGANSHEACRTYFPDYEAYPCKTFEEAFEAIKSGVAQLGMIPIENSIA 60 Query: 61 GRVADIHHLLPASGLFIVGEWFLPIRHQLMAINGTKLADIKSVESHVHALGQCRRVIRKL 120 GRVAD+HHLLPASGL I+GE F PIR QLMA G KL DIK V S AL QCR +++L Sbjct: 61 GRVADVHHLLPASGLKIIGERFKPIRFQLMANKGVKLEDIKVVSSMPIALSQCRNSLKRL 120 Query: 121 GIKPIVAADTAGSARDISERANKSVAAIASRLAADIYGLDILAEDIEDEAHNTTRFVVL- 179 G++ A DTAG+A+ ++ + N + AA+A LAA+IYGLDILA DIEDE HNTTRF+V+ Sbjct: 121 GVETEAAGDTAGAAKALALKPNPTHAAVAPALAAEIYGLDILARDIEDERHNTTRFLVMT 180 Query: 180 AREAKWAAQGSGPLVTTFVFRVRNLPAALYKALGGFATNGVNMTKLESYMVDGNFFATQF 239 A +A A + VT+FVFRVRNLPAALYKALGGFATNGVNMTKLESYM GNF AT F Sbjct: 181 ADKAPAAPDFTHRCVTSFVFRVRNLPAALYKALGGFATNGVNMTKLESYMEGGNFTATFF 240 Query: 240 YADVDGHPDDRGLAFAIEELKFFSREFRIVGVYPGHPFR 278 YA+VDG P+DR LA A++ELKFFS F I+GVYP PFR Sbjct: 241 YAEVDGRPEDRNLALALDELKFFSERFEILGVYPADPFR 279