BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0142.0005.p         (117 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc03751 [L] COG3436 Transposase and inactivated derivatives Sme...   166   1e-41
SP1442 [L] COG3436 Transposase and inactivated derivatives Spn S...    83   2e-16
BMEII0712 [L] COG3436 Transposase and inactivated derivatives Bm...    82   2e-16
SMc03279 [L] COG3436 Transposase and inactivated derivatives Sme...    80   1e-15
SPy0133 [L] COG3436 Transposase and inactivated derivatives Spy ...    78   5e-15

>SMc03751 [L] COG3436 Transposase and inactivated derivatives Sme
          Sinorhizobium meliloti
          Length = 149

 Score =  166 bits (419), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 81/92 (88%), Positives = 85/92 (92%)

Query: 1  MFRLGGELQVYLHREPIDFRAGINSLAVLVQETMALDPFALAVFAFCNRRCDRMKLLFFD 60
          MF+LG +LQVYLHREPIDFRAGINSLAVLVQETMALDPFA AVFAFCNRR DRMKLLFFD
Sbjct: 1  MFKLGADLQVYLHREPIDFRAGINSLAVLVQETMALDPFAPAVFAFCNRRRDRMKLLFFD 60

Query: 61 RSGFVLVLKRLTEDKFRWPRRQEAVVTLTTEQ 92
          RSGFVLVLKRL EDKFRWPR QE V+ LTTE+
Sbjct: 61 RSGFVLVLKRLAEDKFRWPRHQETVMRLTTER 92


>SP1442 [L] COG3436 Transposase and inactivated derivatives Spn
           Streptococcus pneumoniae TIGR4
          Length = 116

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 54/99 (54%)

Query: 9   QVYLHREPIDFRAGINSLAVLVQETMALDPFALAVFAFCNRRCDRMKLLFFDRSGFVLVL 68
           QVYL     D R GI+SLA LV+    LDPF+  VF FC  R DR K L++D  GF L+ 
Sbjct: 10  QVYLVCGKTDMRQGIDSLAYLVKTHFELDPFSGQVFLFCGGRKDRFKALYWDGQGFWLLY 69

Query: 69  KRLTEDKFRWPRRQEAVVTLTTEQLHSILDGIDIDAMVR 107
           KR    K  WP  ++ V  LT EQ+  ++ G  I   + 
Sbjct: 70  KRFENGKLTWPSTEKDVKALTPEQVDWLMKGFSITPKIN 108


>BMEII0712 [L] COG3436 Transposase and inactivated derivatives Bme Brucella
           melitensis
          Length = 117

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 69/112 (61%)

Query: 1   MFRLGGELQVYLHREPIDFRAGINSLAVLVQETMALDPFALAVFAFCNRRCDRMKLLFFD 60
           M  LG +L++ +  +P+DFR GIN LA LV   +  +P++  ++ F ++R DR+K++ +D
Sbjct: 1   MISLGSDLRIMIASKPVDFRKGINGLAALVSTALGPNPYSGDIYVFRSKRNDRLKMVVWD 60

Query: 61  RSGFVLVLKRLTEDKFRWPRRQEAVVTLTTEQLHSILDGIDIDAMVRHPVRQ 112
            SG VL+ K L + +F WP      V L+  +L  +LDG+D   + + PV++
Sbjct: 61  GSGMVLLTKVLEDRRFIWPAVHAGAVRLSASELALLLDGLDWTRVEKKPVKR 112


>SMc03279 [L] COG3436 Transposase and inactivated derivatives Sme
           Sinorhizobium meliloti
          Length = 118

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 64/110 (58%)

Query: 8   LQVYLHREPIDFRAGINSLAVLVQETMALDPFALAVFAFCNRRCDRMKLLFFDRSGFVLV 67
           +++ +  +P+DFR G+N L  LV    + DP+   VF F  +RCDR++ +++D SG +L 
Sbjct: 9   VKIMVATQPVDFRRGMNGLVALVASAPSADPYCGDVFVFRAKRCDRLRCIYWDGSGMILA 68

Query: 68  LKRLTEDKFRWPRRQEAVVTLTTEQLHSILDGIDIDAMVRHPVRQYQVAG 117
            K L   KF WP  ++  + +++++   +L GID   + R+ V++    G
Sbjct: 69  TKWLEAGKFVWPPIRDGAMQMSSQEFSLLLAGIDWTRVKRNLVKRPTKVG 118


>SPy0133 [L] COG3436 Transposase and inactivated derivatives Spy
           Streptococcus pyogenes M1 GAS
          Length = 116

 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 57/105 (54%)

Query: 3   RLGGELQVYLHREPIDFRAGINSLAVLVQETMALDPFALAVFAFCNRRCDRMKLLFFDRS 62
           RL    QVYL     D R GI+SLA LV+    LD F+ AV+ FC  R DR K L++D  
Sbjct: 4   RLNDLGQVYLVCGKTDMRQGIDSLAYLVKSQHELDLFSGAVYLFCGGRRDRFKALYWDGQ 63

Query: 63  GFVLVLKRLTEDKFRWPRRQEAVVTLTTEQLHSILDGIDIDAMVR 107
           GF L+ KR    K  WPR ++ V  LT  Q+  ++ G  I   ++
Sbjct: 64  GFWLLYKRFENGKLAWPRNRDEVKCLTAVQVDWLMKGFFISPNIK 108