BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0140.0010.p (455 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PM0540 [G] COG1640 4-alpha-glucanotransferase Pmu Pasteurella mu... 247 5e-65 YPO0126 [G] COG1640 4-alpha-glucanotransferase Ype Yersinia pestis 234 3e-61 VCA0014 [G] COG1640 4-alpha-glucanotransferase Vch Vibrio cholerae 229 1e-59 HI1356 [G] COG1640 4-alpha-glucanotransferase Hin Haemophilus in... 228 2e-59 malQ [G] COG1640 4-alpha-glucanotransferase Eco Escherichia coli... 226 1e-58 >PM0540 [G] COG1640 4-alpha-glucanotransferase Pmu Pasteurella multocida Length = 697 Score = 247 bits (630), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 166/485 (34%), Positives = 245/485 (50%), Gaps = 40/485 (8%) Query: 6 KAQTLGIQTEYIDGSGHRRVTTPEALTAILDALPPQAPR---RIIADPVVI----RGGQA 58 +A+ GI + D +G+ + E LT D L + ++ D VV+ Q Sbjct: 9 EAEKQGIAPSHYDINGNLIYASQETLTYFTDLLKSSSATSEAQLHFDDVVVFLENEPIQY 68 Query: 59 AQTRLSEAARLPVQWKLAN--GTGVLAQGEARERSVTWPSGLPEGVHRLQLSDASGSEEL 116 A TRL + P+ ++ + G +L Q +T P+ L G + L+++ + + + Sbjct: 69 ALTRLPVVNQTPLSCQIMDEAGKHILTQSCIERDVITLPA-LEFGYYHLRITYENHAYSV 127 Query: 117 PLLVAPQGAFGG---EFDRCWVIAVQLYGVRSARNWGIGDFTDLQHLLX-----GAGGVG 168 LL++P+ A+ + + W + VQLY +RS +NWGIGDF DL +L+ G +G Sbjct: 128 RLLISPKTAYQPPVLQQRKAWGLNVQLYSLRSKQNWGIGDFADLAYLVEQATKYGVDFIG 187 Query: 169 LNPLHALFDDRPGDCSPYSPNSRLFLNGLYIDVEQIPEFR---------ADAETKAALAP 219 +NPLH ++ P SPYS +SR +LN +Y+ V +PEF+ A E + L Sbjct: 188 INPLHLMYSAVPEWASPYSSSSRRWLNPIYLSVTTLPEFKCCKSVQHWFASDEIQDLLEQ 247 Query: 220 LRSHDMVDYVGVAAQKWPALRAAFAAFK---ANPGLGRWQDFEAYRNEQGTLLSRFACFE 276 L++ ++VDY V K AL FA K + + R Q F + +QG L FE Sbjct: 248 LQATELVDYAQVMWLKQNALEQLFAFSKRSQSTSIIQRRQAFLQFMQQQGEPLLLQGLFE 307 Query: 277 VMRRKF--NTP------WWEWPDEWRQPSDAACARLRRARDSAAEVEFVEFVQWTADRQL 328 V+ R+ N P W W EW+Q S A L + AE+EF ++QW A QL Sbjct: 308 VLDRQSHSNMPTEKEIGWLGWRREWQQLSPAKRQTLLKTHQ--AEIEFYAWLQWLATEQL 365 Query: 329 GACQALAHKLGMRVGLYLDVAVGVQSDGFDAWNEQTAISRHLGVGAPPDPLNTAGQDWGL 388 QAL H+LGM +G+Y D+AV D W + + VGAPPDPL GQ+W L Sbjct: 366 TDIQALCHRLGMNLGIYGDLAVNSSRGSADVWTDPELYFVNASVGAPPDPLGPVGQNWNL 425 Query: 389 AGFNAAGLEQRSFEPFRQMLRASMHHAGAIRLDHAFGLKRLYLVPRGFGPANGAYVLMPF 448 +N A L +R F+PF MLR++M H G +R+DH GL RL+L+P A+G YV PF Sbjct: 426 PPYNPAILTRRGFQPFIDMLRSNMQHFGILRIDHVMGLFRLWLIPEEKSAADGVYVHYPF 485 Query: 449 XGRAA 453 A Sbjct: 486 DALMA 490 >YPO0126 [G] COG1640 4-alpha-glucanotransferase Ype Yersinia pestis Length = 698 Score = 234 bits (598), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 162/474 (34%), Positives = 234/474 (49%), Gaps = 34/474 (7%) Query: 6 KAQTL-GIQTEYIDGSGHRRVTTPEALTAILDALPPQ--APRRIIAD---PVVIRGGQAA 59 +A TL GI YI+ G + T E +L A+ A A+ PVV + Sbjct: 8 QAATLAGIAASYINAHGKPQATLAETKEQLLAAMGRSLGAHDTQTANTPLPVVKVFTFGS 67 Query: 60 QTRLSEAARLPVQWKLANGTGVLAQGE-ARERSVTWPSGLPEGVHRLQLSDASGSEELPL 118 +L A W+L G L QG + ++++T P+ LP G HRL L + + Sbjct: 68 PMQLPMAGSGDYHWQLQTENGELHQGRISAKKTLTLPASLPLGYHRLILEQDLQQWQCSI 127 Query: 119 LVAPQGAFGGEF----DRCWVIAVQLYGVRSARNWGIGDFTDLQHLLX-----GAGGVGL 169 +VAP+ + + + W VQLY +RS NWGIGDF DL+ +L G +GL Sbjct: 128 IVAPKRCYEPDALLQGKKLWGACVQLYTLRSEHNWGIGDFGDLKQMLEQVGERGGSFIGL 187 Query: 170 NPLHALFDDRPGDCSPYSPNSRLFLNGLYIDVEQIPEFRAD---------AETKAALAPL 220 NP+HAL+ P SPYSP+SR +LN +YID+ ++ EF+ AET+ ALA Sbjct: 188 NPIHALYPANPHSASPYSPSSRRWLNVIYIDINRVEEFQQSEAAQRWWHQAETQQALAKS 247 Query: 221 RSHDMVDYVGVAAQKWPALRAAFAAFKANPGL-GRWQDFEAYRNEQGTLLSRFACFEVMR 279 R + VDY V K ALR +F F A + Q F + + G+ L + A F+ + Sbjct: 248 RESEWVDYPLVMQLKLTALRLSFPLFTARKAKDAQVQAFRHFVEQGGSSLHQQAVFDALH 307 Query: 280 RKFNTP------WWEWPDEWRQPSDAACARLRRARDSAAEVEFVEFVQWTADRQLGACQA 333 + W WP+++R +A A R+ A EV F ++QW A Q C Sbjct: 308 AHLSEHDPMMWGWPVWPEKYRDGHSSAVADF--CREHADEVTFYLWLQWLAASQFDDCFQ 365 Query: 334 LAHKLGMRVGLYLDVAVGVQSDGFDAWNEQTAISRHLGVGAPPDPLNTAGQDWGLAGFNA 393 + + M +GLY D+AVGV G + W ++ VGAPPD L GQ+WGL + Sbjct: 366 SSQQRKMPIGLYRDLAVGVAEGGAETWCDRELYCLKASVGAPPDILGPLGQNWGLPPMDP 425 Query: 394 AGLEQRSFEPFRQMLRASMHHAGAIRLDHAFGLKRLYLVPRGFGPANGAYVLMP 447 + R+++PF +LRA+M GA+R+DH L RL+ +P G GAYV P Sbjct: 426 HVMVARAYQPFIDLLRANMTSCGALRIDHVMALLRLWWIPYGHTADQGAYVKYP 479 >VCA0014 [G] COG1640 4-alpha-glucanotransferase Vch Vibrio cholerae Length = 726 Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 149/449 (33%), Positives = 220/449 (48%), Gaps = 47/449 (10%) Query: 44 RRIIADPV-VIRGGQAAQTRL---SEAARLPVQWKLANGTGVLAQGEARERSV------- 92 ++ + DPV V+ G A + L A W+L G + +G + + V Sbjct: 61 KKDVVDPVLVVHQGSAIEVPLYLGVSARESEFDWRLQTEQGEVLEGYLQSQIVRDERAEG 120 Query: 93 -----TWPSGLPEGVHRLQLSDA--SGSEELPLLVAPQGAFG----GEFDRCWVIAVQLY 141 P+ LP G H L ++ E+ L+V PQ + + + W +VQLY Sbjct: 121 GPLVFALPNDLPLGYHTLLIARKRRKAPYEMTLIVTPQACYKQPALAQGKKLWGPSVQLY 180 Query: 142 GVRSARNWGIGDFTDLQHLLX-----GAGGVGLNPLHALFDDRPGDCSPYSPNSRLFLNG 196 +R+ NWG+GDF DL+ L+ G VGLNP+HALF P SPYSP+SR +LN Sbjct: 181 TLRTQHNWGMGDFGDLKQLVADIASRGGDFVGLNPIHALFPANPEGASPYSPSSRRWLNI 240 Query: 197 LYIDVEQIPEFRADAETKAA---------LAPLRSHDMVDYVGVAAQKWPALRAAFAAFK 247 LYIDV +PEF AE + L +R V+Y VA K L FA FK Sbjct: 241 LYIDVSSVPEFALSAEAQQKVGSPEFQQRLQKVRDAHWVNYSEVAELKMSVLPLLFAEFK 300 Query: 248 A---NPGLGRWQDFEAYRNEQGTLLSRFACFEVMRRKF---NTPWWEWP---DEWRQPSD 298 + R F + E G L A F+ + + + W WP +++R+ + Sbjct: 301 KRHLDKQTDRAHAFLKFVEEGGESLLHQAAFDALHAELHAQDASVWGWPVFPEKYRRFDN 360 Query: 299 AACARLRRARDSAAEVEFVEFVQWTADRQLGACQALAHKLGMRVGLYLDVAVGVQSDGFD 358 +A + D V ++QW AD Q+ Q+LA + GM VGLY D+AVGV G + Sbjct: 361 SAVQKF--IEDHQDAVHIYMYLQWIADTQIHEVQSLAEEKGMAVGLYRDLAVGVADSGSE 418 Query: 359 AWNEQTAISRHLGVGAPPDPLNTAGQDWGLAGFNAAGLEQRSFEPFRQMLRASMHHAGAI 418 W + + + + +GAPPD L GQ+WGL N L+ +++ + ++LRA+M H GA+ Sbjct: 419 TWADHGNLLQDVSIGAPPDVLGPLGQNWGLPPLNPQALQATAYDAYIKLLRANMKHCGAL 478 Query: 419 RLDHAFGLKRLYLVPRGFGPANGAYVLMP 447 R+DH GL RL+ +P+G GAY+ P Sbjct: 479 RIDHVLGLLRLWWIPKGENATKGAYIYYP 507 >HI1356 [G] COG1640 4-alpha-glucanotransferase Hin Haemophilus influenzae Length = 699 Score = 228 bits (582), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 154/480 (32%), Positives = 233/480 (48%), Gaps = 36/480 (7%) Query: 3 LYAKAQTLGIQTEYIDGSGHRRVTTPEALTAILDAL-PPQAPRRIIADPVVIRGGQAAQT 61 L KA+ GI + D GH + ++ ++ L PP + D + + Sbjct: 10 LKQKAEKCGIALSHYDIDGHLIFADEKTVSTFVELLQPPPKAKGQFDDVLAAFENEPIDY 69 Query: 62 RLSEAARLP---VQWKLAN-GTGVLAQGEARERSVTWPSGLPEGVHRLQLSDASGSEELP 117 RL+ P +++L + +L + SV LP G ++L + + + Sbjct: 70 RLNRLDLPPSAEYRYQLTDESNAILLEKILSNLSVLSLPPLPFGYYQLSIFSDTEQYRIR 129 Query: 118 LLVAPQGAFGG---EFDRCWVIAVQLYGVRSARNWGIGDFTDLQHLL-----XGAGGVGL 169 LL++P+ AF E + W + VQLY +RS +NWGIGDF DL +L+ GA VG+ Sbjct: 130 LLISPKTAFQPPVLENKKVWGVNVQLYSLRSEQNWGIGDFGDLAYLIEQSAKQGADYVGI 189 Query: 170 NPLHALFDDRPGDCSPYSPNSRLFLNGLYIDVEQIPEFR---------ADAETKAALAPL 220 NPLH + P SPYS +SR +LN LY+D+ +PEF+ + +A +A L Sbjct: 190 NPLHLPYPAVPNWASPYSSSSRRWLNFLYLDIPDLPEFKRCRSVQNWFKREDIQAKIAAL 249 Query: 221 RSHDMVDYVGVAAQKWPALRAAFAAFKANPGL---GRWQDFEAYRNEQGTLLSRFACFEV 277 R D VDY + A K AL F F+ + + R + F Y +G L F V Sbjct: 250 RESDCVDYSSILALKLTALEPLFDFFQRSQSVEIVTRRKIFAEYLKNKGEPLLLQGLFNV 309 Query: 278 M--------RRKFNTP-WWEWPDEWRQPSDAACARLRRARDSAAEVEFVEFVQWTADRQL 328 + + + NT W W EW+ S A R + +++F ++QW + QL Sbjct: 310 LDLQEHADHQAEENTIGWLGWRKEWQHLS--AAKRKALLKTHHEKIQFFAWLQWLTEEQL 367 Query: 329 GACQALAHKLGMRVGLYLDVAVGVQSDGFDAWNEQTAISRHLGVGAPPDPLNTAGQDWGL 388 A Q L + GM++G+Y D+AV D W++ + +GAPPDPL GQ+W L Sbjct: 368 SALQNLCKQSGMKLGIYGDLAVNSSRGSADVWSDPDLYCVNASIGAPPDPLGPVGQNWNL 427 Query: 389 AGFNAAGLEQRSFEPFRQMLRASMHHAGAIRLDHAFGLKRLYLVPRGFGPANGAYVLMPF 448 +N L+ R F PF ML A+M + G +R+DH GL RL+ +P+G A+GAYV PF Sbjct: 428 PPYNPTVLKARGFAPFIDMLCANMQYFGVLRIDHVMGLFRLWWIPKGKTAADGAYVHYPF 487 >malQ [G] COG1640 4-alpha-glucanotransferase Eco Escherichia coli K12 Length = 694 Score = 226 bits (575), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 152/463 (32%), Positives = 222/463 (47%), Gaps = 28/463 (6%) Query: 11 GIQTEYIDGSGHRRVTTPEALTAILDALPPQAPRRIIADPV--VIRGGQAAQTRLSEAAR 68 GI YI+ G + + E +LDA+ + ++ PV V+ + + Sbjct: 14 GISPNYINAHGKPQSISAETKRRLLDAMHQRTATKVAVTPVPNVMVYTSGKKMPMVVEGS 73 Query: 69 LPVQWKLANGTGVLAQGEARE-RSVTWPSGLPEGVHRLQLSDASGSEELPLLVAPQGAFG 127 W L G +G ++ P+ LPEG H L L+ ++VAP+ + Sbjct: 74 GEYSWLLTTEEGTQYKGHVTGGKAFNLPTKLPEGYHTLTLTQDDQRAHCRVIVAPKRCYE 133 Query: 128 GEF----DRCWVIAVQLYGVRSARNWGIGDFTDLQHLLX-----GAGGVGLNPLHALFDD 178 + + W VQLY +RS +NWGIGDF DL+ +L G +GLNP+HAL+ Sbjct: 134 PQALLNKQKLWGACVQLYTLRSEKNWGIGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPA 193 Query: 179 RPGDCSPYSPNSRLFLNGLYIDVEQIPEFRADAE---------TKAALAPLRSHDMVDYV 229 P SPYSP+SR +LN +YIDV + +F E T+ L R D VDY Sbjct: 194 NPESASPYSPSSRRWLNVIYIDVNAVEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYS 253 Query: 230 GVAAQKWPALRAAFAAFKANPGLGRWQDFEAYRNEQGTLLSRFACFEVM---RRKFNTPW 286 V A K ALR A+ F A + F + EQG L A F+ + + K + Sbjct: 254 TVTALKMTALRMAWKGF-AQRDDEQMAAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMR 312 Query: 287 WEWP--DEWRQPSDAACARLRRARDSAAEVEFVEFVQWTADRQLGACQALAHKLGMRVGL 344 W WP E Q D+ R + + +V+F ++QW A Q AC ++ M +GL Sbjct: 313 WGWPAWPEMYQNVDSPEVR-QFCEEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGL 371 Query: 345 YLDVAVGVQSDGFDAWNEQTAISRHLGVGAPPDPLNTAGQDWGLAGFNAAGLEQRSFEPF 404 Y D+AVGV G + W ++ VGAPPD L GQ+WGL + + R++EPF Sbjct: 372 YRDLAVGVAEGGAETWCDRELYCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPF 431 Query: 405 RQMLRASMHHAGAIRLDHAFGLKRLYLVPRGFGPANGAYVLMP 447 ++LRA+M + GA+R+DH + RL+ +P G GAYV P Sbjct: 432 IELLRANMQNCGALRIDHVMSMLRLWWIPYGETADQGAYVHYP 474