BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0140.0009.p (179 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO0126 [G] COG1640 4-alpha-glucanotransferase Ype Yersinia pestis 89 4e-18 malQ [G] COG1640 4-alpha-glucanotransferase Eco Escherichia coli... 86 4e-17 ZmalQ [G] COG1640 4-alpha-glucanotransferase EcZ Escherichia col... 85 7e-17 ECs4258 [G] COG1640 4-alpha-glucanotransferase Ecs Escherichia c... 85 7e-17 VCA0014 [G] COG1640 4-alpha-glucanotransferase Vch Vibrio cholerae 84 2e-16 >YPO0126 [G] COG1640 4-alpha-glucanotransferase Ype Yersinia pestis Length = 698 Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 91/197 (46%), Gaps = 25/197 (12%) Query: 1 VIGEDLGTVPPGFREQMNGWGIWSYLVTMFETDDRGVFRNADYYLPDALVTFNTHDLSTY 60 VIGEDLGTVP ++ G++SY V FE D +FR Y A+ T THDL T Sbjct: 498 VIGEDLGTVPVEIVGKLRDSGVYSYKVLYFEHDSENIFRAPQSYPVQAMATITTHDLPTL 557 Query: 61 AGWRSFSDLKTKRALGIDPGE------------TDEGRWHALGQLDDVLRRHDIHANDFY 108 G+ DL LG+ P + +G L + D V ++ H Sbjct: 558 RGYWQADDLTLGNKLGLYPDQQILKQLYLDRERAKQGLLEGLHRYDCVPKKVG-HKAALL 616 Query: 109 SVASFLARTRSRMMAVSMEDLLGIVEQP----------NIPGTVYEHPNWKRRLPVSIEH 158 S++ L R R +A S LLG+ QP NIPGT E+PNW+R+L S+E Sbjct: 617 SMSPVLNRGLQRYVADSASALLGL--QPEDWLDMAAPVNIPGTTDEYPNWRRKLSASLEE 674 Query: 159 LASAIDVDALKRATRER 175 + + ++ L + +R Sbjct: 675 IFADSQINRLLKDLDKR 691 >malQ [G] COG1640 4-alpha-glucanotransferase Eco Escherichia coli K12 Length = 694 Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 19/189 (10%) Query: 1 VIGEDLGTVPPGFREQMNGWGIWSYLVTMFETDDRGVFRNADYYLPDALVTFNTHDLSTY 60 VIGEDLGTVP ++ G++SY V FE D FR Y ++ THDL T Sbjct: 493 VIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTL 552 Query: 61 AGWRSFSDLKTKRALGIDPGETD-----EGRWHALGQLDDVLRRHDI------HANDFYS 109 G+ DL + LG+ P E + R A L D L ++ H S Sbjct: 553 RGYWECGDLTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMS 612 Query: 110 VAS--------FLARTRSRMMAVSMEDLLGIVEQPNIPGTVYEHPNWKRRLPVSIEHLAS 161 + ++A + S ++ + ED L + E NIPGT Y++ NW+R+L ++E + + Sbjct: 613 MTPTLNRGLQRYIADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLESMFA 672 Query: 162 AIDVDALKR 170 V+ L + Sbjct: 673 DDGVNKLLK 681 >ZmalQ [G] COG1640 4-alpha-glucanotransferase EcZ Escherichia coli O157:H7 EDL933 Length = 694 Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 19/189 (10%) Query: 1 VIGEDLGTVPPGFREQMNGWGIWSYLVTMFETDDRGVFRNADYYLPDALVTFNTHDLSTY 60 VIGEDLGTVP ++ G++SY V FE D FR Y ++ THDL T Sbjct: 493 VIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTL 552 Query: 61 AGWRSFSDLKTKRALGIDPGETD-----EGRWHALGQLDDVLRRHDI------HANDFYS 109 G+ DL + LG+ P E + R A L D L ++ H S Sbjct: 553 RGYWESGDLTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMS 612 Query: 110 VAS--------FLARTRSRMMAVSMEDLLGIVEQPNIPGTVYEHPNWKRRLPVSIEHLAS 161 + ++A + S ++ + ED L + E NIPGT Y++ NW+R+L ++E + + Sbjct: 613 MTPTLNRGLQRYIADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLETMFA 672 Query: 162 AIDVDALKR 170 V+ L + Sbjct: 673 DDGVNKLLK 681 >ECs4258 [G] COG1640 4-alpha-glucanotransferase Ecs Escherichia coli O157:H7 Length = 694 Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 19/189 (10%) Query: 1 VIGEDLGTVPPGFREQMNGWGIWSYLVTMFETDDRGVFRNADYYLPDALVTFNTHDLSTY 60 VIGEDLGTVP ++ G++SY V FE D FR Y ++ THDL T Sbjct: 493 VIGEDLGTVPVEIVGKLRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTL 552 Query: 61 AGWRSFSDLKTKRALGIDPGETD-----EGRWHALGQLDDVLRRHDI------HANDFYS 109 G+ DL + LG+ P E + R A L D L ++ H S Sbjct: 553 RGYWESGDLTLGKTLGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMS 612 Query: 110 VAS--------FLARTRSRMMAVSMEDLLGIVEQPNIPGTVYEHPNWKRRLPVSIEHLAS 161 + ++A + S ++ + ED L + E NIPGT Y++ NW+R+L ++E + + Sbjct: 613 MTPTLNRGLQRYIADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLETMFA 672 Query: 162 AIDVDALKR 170 V+ L + Sbjct: 673 DDGVNKLLK 681 >VCA0014 [G] COG1640 4-alpha-glucanotransferase Vch Vibrio cholerae Length = 726 Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 99/199 (49%), Gaps = 25/199 (12%) Query: 1 VIGEDLGTVPPGFREQMNGWGIWSYLVTMFETD-DRGVFRNADYYLPDALVTFNTHDLST 59 VIGEDLGTVP E + G+ SY V FET + G + + +Y ++ THD+ T Sbjct: 526 VIGEDLGTVPDEIVELLRDAGVHSYKVFFFETSKEDGGYVSPAHYAEQSMAALCTHDMPT 585 Query: 60 YAGWRSFSDLKTKRALGIDPGET-----------------DEGRWHALGQLDDVLRRH-- 100 G+ DLK R +G+ P E D WH G L D + R Sbjct: 586 LRGFWHCDDLKMGREIGLYPDEEQLQGLFDDRLKSKQGILDSVAWH--GYLPDGVGRDAT 643 Query: 101 DIHANDFYSVASFL--ARTRSRMMAVSMEDLLGIVEQPNIPGTVYEHPNWKRRLPVSIEH 158 + + + S A L A S +++V +ED L + + NIPGTV E+PNW+R+L ++++ Sbjct: 644 QVPMDSYLSEALQLHVAAGSSALLSVQLEDWLEMDKPVNIPGTVNEYPNWRRKLSMNLDE 703 Query: 159 LASAIDVDAL-KRATRERS 176 + + +V+ + R T RS Sbjct: 704 IFAREEVNRIAARLTEVRS 722